RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 RNF8O76064 485 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 B3GAT3O94766 335 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 UBOX5O94941 541 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 SLCO2B1O94956 709 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 SNAPINO95295 136 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 BMP10O95393 424 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 RAB3DO95716 219 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 FAM107AO95990 144 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 LINGO3P0C6S8 592 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 GNSP15586 552 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 CCNOP22674 350 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 FSHRP23945 695 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 KDELR1P24390 212 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 CYP2F1P24903 491 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 PTX3P26022 381 aaPredicted RBP3.44□□□□□ -1.86
SMG6-208ENST00000570874 CD27P26842 260 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 GIFP27352 417 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 CYP2C18P33260 490 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 PNPLA4P41247 253 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 CDKN2BP42772 138 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 SLC1A1P43005 524 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 CHRNA4P43681 627 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 PREPP48147 710 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 GALK1P51570 392 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 RAP1GDS1P52306 607 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 HK2P52789 917 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 PRPS1P60891 318 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 HNRNPKP61978 463 aaKnown RBP eCLIP3.44□□□□□ -1.86
SMG6-208ENST00000570874 RPL23AP62750 156 aaKnown RBP3.44□□□□□ -1.86
SMG6-208ENST00000570874 B4GALNT1Q00973 533 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 SLC6A3Q01959 620 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 DSC1Q08554 894 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 SPOCK1Q08629 439 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 BST2Q10589 180 aaKnown RBP3.44□□□□□ -1.86
SMG6-208ENST00000570874 HYAL2Q12891 473 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 TMEM115Q12893 351 aaPredicted RBP3.44□□□□□ -1.86
SMG6-208ENST00000570874 TRAF2Q12933 501 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 TUSC3Q13454 348 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 CCINQ13939 588 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 PIGHQ14442 188 aaPredicted RBP3.44□□□□□ -1.86
SMG6-208ENST00000570874 ZNF268Q14587 947 aaPredicted RBP3.44□□□□□ -1.86
SMG6-208ENST00000570874 PTPRRQ15256 657 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 STILQ15468 1287 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 PDK4Q16654 411 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 BTBD16Q32M84 506 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 TRIM60Q495X7 471 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 IFI44LQ53G44 452 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 FBLN7Q53RD9 439 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 LCN1P1Q5VSP4 162 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 SYPL2Q5VXT5 272 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 STEAP3Q658P3 488 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 DUPD1Q68J44 220 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 FSTL4Q6MZW2 842 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 PSAPL1Q6NUJ1 521 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 TMEM214Q6NUQ4 689 aaKnown RBP3.44□□□□□ -1.86
SMG6-208ENST00000570874 RFWD3Q6PCD5 774 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 TTC33Q6PID6 262 aaPredicted RBP3.44□□□□□ -1.86
SMG6-208ENST00000570874 LRFN4Q6PJG9 635 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 CCDC137Q6PK04 289 aaKnown RBP3.44□□□□□ -1.86
SMG6-208ENST00000570874 PAOXQ6QHF9 649 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 KIAA0408Q6ZU52 694 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 ESPNLQ6ZVH7 1005 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 BHLHA9Q7RTU4 235 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 DEFB128Q7Z7B8 93 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 RTN4RL2Q86UN3 420 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 PDZD3Q86UT5 571 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 FAM35AQ86V20 835 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 IQCHQ86VS3 1027 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 UNC93AQ86WB7 457 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 NRROSQ86YC3 692 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 ZDHHC21Q8IVQ6 265 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 MCATQ8IVS2 390 aaKnown RBP3.44□□□□□ -1.86
SMG6-208ENST00000570874 CHERPQ8IWX8 916 aaKnown RBP3.44□□□□□ -1.86
SMG6-208ENST00000570874 TP53INP2Q8IXH6 220 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 RHOT1Q8IXI2 618 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 DEFB106AQ8N104 65 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 UBE2J2Q8N2K1 259 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 FAM160A2Q8N612 972 aaPredicted RBP3.44□□□□□ -1.86
SMG6-208ENST00000570874 CCDC185Q8N715 623 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 SCAIQ8N9R8 606 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 GALNT11Q8NCW6 608 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 WDR48Q8TAF3 677 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 FAM172AQ8WUF8 416 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 SMG7Q92540 1137 aaKnown RBP3.44□□□□□ -1.86
SMG6-208ENST00000570874 DNASE1L2Q92874 299 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 HAVCR1Q96D42 359 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 OTUB2Q96DC9 234 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 SCARF2Q96GP6 870 aaPredicted RBP3.44□□□□□ -1.86
SMG6-208ENST00000570874 SLC41A3Q96GZ6 507 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 PCED1BQ96HM7 432 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 PRRC1Q96M27 445 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 QRFPRQ96P65 431 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 CASD1Q96PB1 797 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 ZIM3Q96PE6 472 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 PKMYT1Q99640 499 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 GPA33Q99795 319 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 CITED1Q99966 193 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 DPYSL5Q9BPU6 564 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 CNPY3Q9BT09 278 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 MED10Q9BTT4 135 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms