RNA–Protein interactions for RNA: ENST00000570871.2

PCDHB19P-201, Transcript of protocadherin beta 19 pseudogene, humanhuman

BASIC

Gene PCDHB19P, Length 2,371 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB19P-201ENST00000570871 NR4A2P43354 598 aa16.29■□□□□ 0.2
PCDHB19P-201ENST00000570871 IDH2P48735 452 aaKnown RBP16.29■□□□□ 0.2
PCDHB19P-201ENST00000570871 CRISP3P54108 245 aa16.29■□□□□ 0.2
PCDHB19P-201ENST00000570871 PRKCDQ05655 676 aa16.29■□□□□ 0.2
PCDHB19P-201ENST00000570871 CDH18Q13634 790 aa16.29■□□□□ 0.2
PCDHB19P-201ENST00000570871 ATP13A5Q4VNC0 1218 aa16.29■□□□□ 0.2
PCDHB19P-201ENST00000570871 MLIPQ5VWP3 458 aa16.29■□□□□ 0.2
PCDHB19P-201ENST00000570871 TCAIMQ8N3R3 496 aa16.29■□□□□ 0.2
PCDHB19P-201ENST00000570871 SLC5A8Q8N695 610 aa16.29■□□□□ 0.2
PCDHB19P-201ENST00000570871 Q8N9G6 341 aaPredicted RBP16.29■□□□□ 0.2
PCDHB19P-201ENST00000570871 DCAF4L2Q8NA75 395 aa16.29■□□□□ 0.2
PCDHB19P-201ENST00000570871 BCL7CQ8WUZ0 217 aaPredicted RBP16.29■□□□□ 0.2
PCDHB19P-201ENST00000570871 CASD1Q96PB1 797 aa16.29■□□□□ 0.2
PCDHB19P-201ENST00000570871 P2RY13Q9BPV8 354 aa16.29■□□□□ 0.2
PCDHB19P-201ENST00000570871 CENPOQ9BU64 300 aa16.29■□□□□ 0.2
PCDHB19P-201ENST00000570871 BBS2Q9BXC9 721 aa16.29■□□□□ 0.2
PCDHB19P-201ENST00000570871 DNAJC11Q9NVH1 559 aa16.29■□□□□ 0.2
PCDHB19P-201ENST00000570871 RLIMQ9NVW2 624 aa16.29■□□□□ 0.2
PCDHB19P-201ENST00000570871 ADPRHL2Q9NX46 363 aa16.29■□□□□ 0.2
PCDHB19P-201ENST00000570871 KLHL3Q9UH77 587 aa16.29■□□□□ 0.2
PCDHB19P-201ENST00000570871 PCDHGA3Q9Y5H0 932 aa16.29■□□□□ 0.2
PCDHB19P-201ENST00000570871 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.29■□□□□ 0.2
PCDHB19P-201ENST00000570871 TNFRSF11BO00300 401 aa16.29■□□□□ 0.2
PCDHB19P-201ENST00000570871 GFRA2O00451 464 aa16.29■□□□□ 0.2
PCDHB19P-201ENST00000570871 PRMT3O60678 531 aa16.29■□□□□ 0.2
PCDHB19P-201ENST00000570871 DNTTP04053 509 aa16.29■□□□□ 0.2
PCDHB19P-201ENST00000570871 ADORA3P0DMS8 318 aa16.29■□□□□ 0.2
PCDHB19P-201ENST00000570871 TNFRSF1BP20333 461 aa16.29■□□□□ 0.2
PCDHB19P-201ENST00000570871 OR1D2P34982 312 aa16.29■□□□□ 0.2
PCDHB19P-201ENST00000570871 RFLNAQ6ZTI6 216 aa16.29■□□□□ 0.2
PCDHB19P-201ENST00000570871 CBARPQ8N350 705 aaPredicted RBP16.29■□□□□ 0.2
PCDHB19P-201ENST00000570871 KBTBD8Q8NFY9 601 aa16.29■□□□□ 0.2
PCDHB19P-201ENST00000570871 Q96MT0 163 aa16.29■□□□□ 0.2
PCDHB19P-201ENST00000570871 MTERF1Q99551 399 aaKnown RBP16.29■□□□□ 0.2
PCDHB19P-201ENST00000570871 COPS8Q99627 209 aa16.29■□□□□ 0.2
PCDHB19P-201ENST00000570871 C19orf43Q9BQ61 176 aa16.29■□□□□ 0.2
PCDHB19P-201ENST00000570871 CHCHD6Q9BRQ6 235 aa16.29■□□□□ 0.2
PCDHB19P-201ENST00000570871 CCDC59Q9P031 241 aaKnown RBP16.29■□□□□ 0.2
PCDHB19P-201ENST00000570871 PADI2Q9Y2J8 665 aa16.29■□□□□ 0.2
PCDHB19P-201ENST00000570871 HAT1O14929 419 aa16.28■□□□□ 0.2
PCDHB19P-201ENST00000570871 GCM2O75603 506 aaPredicted RBP16.28■□□□□ 0.2
PCDHB19P-201ENST00000570871 C8GP07360 202 aa16.28■□□□□ 0.2
PCDHB19P-201ENST00000570871 JUPP14923 745 aa16.28■□□□□ 0.2
PCDHB19P-201ENST00000570871 PCSK2P16519 638 aa16.28■□□□□ 0.2
PCDHB19P-201ENST00000570871 CD22P20273 847 aa16.28■□□□□ 0.2
PCDHB19P-201ENST00000570871 CASP3P42574 277 aa16.28■□□□□ 0.2
PCDHB19P-201ENST00000570871 IFITM2Q01629 132 aa16.28■□□□□ 0.2
PCDHB19P-201ENST00000570871 PPIGQ13427 754 aaKnown RBP eCLIP16.28■□□□□ 0.2
PCDHB19P-201ENST00000570871 DDX39BQ13838 428 aaKnown RBP16.28■□□□□ 0.2
PCDHB19P-201ENST00000570871 CRTC1Q6UUV9 634 aa16.28■□□□□ 0.2
PCDHB19P-201ENST00000570871 CLIP4Q8N3C7 705 aa16.28■□□□□ 0.2
PCDHB19P-201ENST00000570871 SPPL2AQ8TCT8 520 aa16.28■□□□□ 0.2
PCDHB19P-201ENST00000570871 DOHHQ9BU89 302 aa16.28■□□□□ 0.2
PCDHB19P-201ENST00000570871 DUSP26Q9BV47 211 aa16.28■□□□□ 0.2
PCDHB19P-201ENST00000570871 RNF208Q9H0X6 261 aa16.28■□□□□ 0.2
PCDHB19P-201ENST00000570871 ZNF226Q9NYT6 803 aa16.28■□□□□ 0.2
PCDHB19P-201ENST00000570871 NDUFAF4Q9P032 175 aa16.28■□□□□ 0.2
PCDHB19P-201ENST00000570871 VPS29Q9UBQ0 182 aa16.28■□□□□ 0.2
PCDHB19P-201ENST00000570871 SERTM1A2A2V5 107 aa16.28■□□□□ 0.2
PCDHB19P-201ENST00000570871 M0R129 80 aa16.28■□□□□ 0.2
PCDHB19P-201ENST00000570871 DYRK3O43781 588 aa16.28■□□□□ 0.2
PCDHB19P-201ENST00000570871 PXNP49023 591 aaPredicted RBP16.28■□□□□ 0.2
PCDHB19P-201ENST00000570871 TUFMP49411 452 aaKnown RBP16.28■□□□□ 0.2
PCDHB19P-201ENST00000570871 HNMTP50135 292 aa16.28■□□□□ 0.2
PCDHB19P-201ENST00000570871 LIMK1P53667 647 aa16.28■□□□□ 0.2
PCDHB19P-201ENST00000570871 CYP4F2P78329 520 aa16.28■□□□□ 0.2
PCDHB19P-201ENST00000570871 SMAD3P84022 425 aaKnown RBP16.28■□□□□ 0.2
PCDHB19P-201ENST00000570871 ARMCX4Q5H9R4 360 aa16.28■□□□□ 0.2
PCDHB19P-201ENST00000570871 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.28■□□□□ 0.2
PCDHB19P-201ENST00000570871 CCBE1Q6UXH8 406 aaPredicted RBP16.28■□□□□ 0.2
PCDHB19P-201ENST00000570871 GDPD3Q7L5L3 318 aa16.28■□□□□ 0.2
PCDHB19P-201ENST00000570871 ZNF513Q8N8E2 541 aaPredicted RBP16.28■□□□□ 0.2
PCDHB19P-201ENST00000570871 OR52J3Q8NH60 311 aa16.28■□□□□ 0.2
PCDHB19P-201ENST00000570871 ATL1Q8WXF7 558 aa16.28■□□□□ 0.2
PCDHB19P-201ENST00000570871 RAD9AQ99638 391 aa16.28■□□□□ 0.2
PCDHB19P-201ENST00000570871 CLSTN3Q9BQT9 956 aa16.28■□□□□ 0.2
PCDHB19P-201ENST00000570871 KLHL42Q9P2K6 505 aa16.28■□□□□ 0.2
PCDHB19P-201ENST00000570871 IFT52Q9Y366 437 aa16.28■□□□□ 0.2
PCDHB19P-201ENST00000570871 PCDHGA2Q9Y5H1 932 aa16.28■□□□□ 0.2
PCDHB19P-201ENST00000570871 CCDC88CQ9P219 2028 aa16.28■□□□□ 0.2
PCDHB19P-201ENST00000570871 C1orf226A1L170 272 aa16.27■□□□□ 0.2
PCDHB19P-201ENST00000570871 OPN1SWP03999 348 aa16.27■□□□□ 0.2
PCDHB19P-201ENST00000570871 CCL5P13501 91 aa16.27■□□□□ 0.2
PCDHB19P-201ENST00000570871 BMPR1AP36894 532 aa16.27■□□□□ 0.2
PCDHB19P-201ENST00000570871 RGS6P49758 472 aa16.27■□□□□ 0.2
PCDHB19P-201ENST00000570871 ST3GAL4Q11206 333 aa16.27■□□□□ 0.2
PCDHB19P-201ENST00000570871 PLD1Q13393 1074 aa16.27■□□□□ 0.2
PCDHB19P-201ENST00000570871 GAB1Q13480 694 aa16.27■□□□□ 0.2
PCDHB19P-201ENST00000570871 ARHGEF6Q15052 776 aa16.27■□□□□ 0.2
PCDHB19P-201ENST00000570871 RGNQ15493 299 aa16.27■□□□□ 0.2
PCDHB19P-201ENST00000570871 ZNF605Q86T29 641 aa16.27■□□□□ 0.2
PCDHB19P-201ENST00000570871 NAGSQ8N159 534 aa16.27■□□□□ 0.2
PCDHB19P-201ENST00000570871 STX19Q8N4C7 294 aa16.27■□□□□ 0.2
PCDHB19P-201ENST00000570871 HJURPQ8NCD3 748 aaPredicted RBP16.27■□□□□ 0.2
PCDHB19P-201ENST00000570871 OR10G2Q8NGC3 310 aa16.27■□□□□ 0.2
PCDHB19P-201ENST00000570871 COL21A1Q96P44 957 aa16.27■□□□□ 0.2
PCDHB19P-201ENST00000570871 STOML2Q9UJZ1 356 aa16.27■□□□□ 0.2
PCDHB19P-201ENST00000570871 PCDHGB6Q9Y5F9 930 aa16.27■□□□□ 0.2
PCDHB19P-201ENST00000570871 NINQ8N4C6 2090 aa16.27■□□□□ 0.19
PCDHB19P-201ENST00000570871 GABRR3A8MPY1 467 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms