RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 ABCF3Q9NUQ8 709 aa16.17■□□□□ 0.18
MAP1LC3B-208ENST00000570189 WHRNQ9P202 907 aa16.17■□□□□ 0.18
MAP1LC3B-208ENST00000570189 CSAG2Q9Y5P2 127 aa16.17■□□□□ 0.18
MAP1LC3B-208ENST00000570189 COPG1Q9Y678 874 aaKnown RBP16.17■□□□□ 0.18
MAP1LC3B-208ENST00000570189 FAM187AA6NFU0 413 aa16.16■□□□□ 0.18
MAP1LC3B-208ENST00000570189 WIPF3A6NGB9 483 aa16.16■□□□□ 0.18
MAP1LC3B-208ENST00000570189 EIF3HO15372 352 aaKnown RBP eCLIP16.16■□□□□ 0.18
MAP1LC3B-208ENST00000570189 KLHL18O94889 574 aa16.16■□□□□ 0.18
MAP1LC3B-208ENST00000570189 WISP3O95389 354 aaPredicted RBP16.16■□□□□ 0.18
MAP1LC3B-208ENST00000570189 DDAH2O95865 285 aa16.16■□□□□ 0.18
MAP1LC3B-208ENST00000570189 C8orf89P0DMQ9 161 aa16.16■□□□□ 0.18
MAP1LC3B-208ENST00000570189 AHRP35869 848 aa16.16■□□□□ 0.18
MAP1LC3B-208ENST00000570189 FASTKD3Q14CZ7 662 aaKnown RBP16.16■□□□□ 0.18
MAP1LC3B-208ENST00000570189 HERC3Q15034 1050 aa16.16■□□□□ 0.18
MAP1LC3B-208ENST00000570189 INAQ16352 499 aa16.16■□□□□ 0.18
MAP1LC3B-208ENST00000570189 SYT16Q17RD7 645 aa16.16■□□□□ 0.18
MAP1LC3B-208ENST00000570189 KLHDC8AQ8IYD2 350 aa16.16■□□□□ 0.18
MAP1LC3B-208ENST00000570189 ST6GALNAC3Q8NDV1 305 aa16.16■□□□□ 0.18
MAP1LC3B-208ENST00000570189 SSC4DQ8WTU2 575 aa16.16■□□□□ 0.18
MAP1LC3B-208ENST00000570189 HAS2Q92819 552 aa16.16■□□□□ 0.18
MAP1LC3B-208ENST00000570189 OR1F2PQ96R84 312 aa16.16■□□□□ 0.18
MAP1LC3B-208ENST00000570189 KRT12Q99456 494 aa16.16■□□□□ 0.18
MAP1LC3B-208ENST00000570189 ERP44Q9BS26 406 aa16.16■□□□□ 0.18
MAP1LC3B-208ENST00000570189 CLK4Q9HAZ1 481 aaKnown RBP16.16■□□□□ 0.18
MAP1LC3B-208ENST00000570189 ANKHQ9HCJ1 492 aa16.16■□□□□ 0.18
MAP1LC3B-208ENST00000570189 AGPAT4Q9NRZ5 378 aa16.16■□□□□ 0.18
MAP1LC3B-208ENST00000570189 MKL2Q9ULH7 1088 aa16.16■□□□□ 0.18
MAP1LC3B-208ENST00000570189 NTNG1Q9Y2I2 539 aa16.16■□□□□ 0.18
MAP1LC3B-208ENST00000570189 ZGRF1Q86YA3 2104 aa16.16■□□□□ 0.18
MAP1LC3B-208ENST00000570189 UTP20O75691 2785 aaKnown RBP16.15■□□□□ 0.18
MAP1LC3B-208ENST00000570189 FAM95CA0A1B0GW59 222 aa16.15■□□□□ 0.18
MAP1LC3B-208ENST00000570189 FEZF1A0PJY2 475 aa16.15■□□□□ 0.18
MAP1LC3B-208ENST00000570189 CYSRT1A8MQ03 144 aa16.15■□□□□ 0.18
MAP1LC3B-208ENST00000570189 AGFG2O95081 481 aa16.15■□□□□ 0.18
MAP1LC3B-208ENST00000570189 AGTR2P50052 363 aa16.15■□□□□ 0.18
MAP1LC3B-208ENST00000570189 HNMTP50135 292 aa16.15■□□□□ 0.18
MAP1LC3B-208ENST00000570189 SKP1P63208 163 aa16.15■□□□□ 0.18
MAP1LC3B-208ENST00000570189 MAT1AQ00266 395 aaKnown RBP16.15■□□□□ 0.18
MAP1LC3B-208ENST00000570189 MRPL49Q13405 166 aaKnown RBP16.15■□□□□ 0.18
MAP1LC3B-208ENST00000570189 NR6A1Q15406 480 aa16.15■□□□□ 0.18
MAP1LC3B-208ENST00000570189 PRSS41Q7RTY9 318 aa16.15■□□□□ 0.18
MAP1LC3B-208ENST00000570189 MAATS1Q7Z4T9 603 aa16.15■□□□□ 0.18
MAP1LC3B-208ENST00000570189 PDSS2Q86YH6 399 aa16.15■□□□□ 0.18
MAP1LC3B-208ENST00000570189 ANKMY2Q8IV38 441 aa16.15■□□□□ 0.18
MAP1LC3B-208ENST00000570189 TBC1D19Q8N5T2 526 aa16.15■□□□□ 0.18
MAP1LC3B-208ENST00000570189 KCT2Q8NC54 265 aa16.15■□□□□ 0.18
MAP1LC3B-208ENST00000570189 OR51Q1Q8NH59 317 aa16.15■□□□□ 0.18
MAP1LC3B-208ENST00000570189 NT5CQ8TCD5 201 aa16.15■□□□□ 0.18
MAP1LC3B-208ENST00000570189 METTL21AQ8WXB1 218 aa16.15■□□□□ 0.18
MAP1LC3B-208ENST00000570189 VPS39Q96JC1 886 aa16.15■□□□□ 0.18
MAP1LC3B-208ENST00000570189 CYTH2Q99418 400 aa16.15■□□□□ 0.18
MAP1LC3B-208ENST00000570189 YIPF2Q9BWQ6 316 aa16.15■□□□□ 0.18
MAP1LC3B-208ENST00000570189 PELI2Q9HAT8 420 aa16.15■□□□□ 0.18
MAP1LC3B-208ENST00000570189 C19orf25Q9UFG5 118 aaPredicted RBP16.15■□□□□ 0.18
MAP1LC3B-208ENST00000570189 ZFP69BQ9UJL9 534 aa16.15■□□□□ 0.18
MAP1LC3B-208ENST00000570189 IKZF3Q9UKT9 509 aa16.15■□□□□ 0.18
MAP1LC3B-208ENST00000570189 BLACEA4D250 179 aa16.14■□□□□ 0.17
MAP1LC3B-208ENST00000570189 FFAR3O14843 346 aa16.14■□□□□ 0.17
MAP1LC3B-208ENST00000570189 GPR42O15529 346 aa16.14■□□□□ 0.17
MAP1LC3B-208ENST00000570189 SEMA7AO75326 666 aa16.14■□□□□ 0.17
MAP1LC3B-208ENST00000570189 IL1RNP18510 177 aa16.14■□□□□ 0.17
MAP1LC3B-208ENST00000570189 XCR1P46094 333 aa16.14■□□□□ 0.17
MAP1LC3B-208ENST00000570189 SCTRP47872 440 aa16.14■□□□□ 0.17
MAP1LC3B-208ENST00000570189 TAS2R39P59534 338 aa16.14■□□□□ 0.17
MAP1LC3B-208ENST00000570189 REEP5Q00765 189 aa16.14■□□□□ 0.17
MAP1LC3B-208ENST00000570189 EEF1A2Q05639 463 aaKnown RBP16.14■□□□□ 0.17
MAP1LC3B-208ENST00000570189 PLAG1Q6DJT9 500 aa16.14■□□□□ 0.17
MAP1LC3B-208ENST00000570189 ADAMTSL2Q86TH1 951 aa16.14■□□□□ 0.17
MAP1LC3B-208ENST00000570189 ZBED8Q8IZ13 594 aa16.14■□□□□ 0.17
MAP1LC3B-208ENST00000570189 PLPP5Q8NEB5 264 aa16.14■□□□□ 0.17
MAP1LC3B-208ENST00000570189 SPATA4Q8NEY3 305 aa16.14■□□□□ 0.17
MAP1LC3B-208ENST00000570189 BRIX1Q8TDN6 353 aaKnown RBP16.14■□□□□ 0.17
MAP1LC3B-208ENST00000570189 SLC5A11Q8WWX8 675 aa16.14■□□□□ 0.17
MAP1LC3B-208ENST00000570189 NEIL2Q969S2 332 aa16.14■□□□□ 0.17
MAP1LC3B-208ENST00000570189 PYCR2Q96C36 320 aa16.14■□□□□ 0.17
MAP1LC3B-208ENST00000570189 TRIM31Q9BZY9 425 aa16.14■□□□□ 0.17
MAP1LC3B-208ENST00000570189 SNX24Q9Y343 169 aa16.14■□□□□ 0.17
MAP1LC3B-208ENST00000570189 OARD1Q9Y530 152 aa16.14■□□□□ 0.17
MAP1LC3B-208ENST00000570189 SVILO95425 2214 aa16.13■□□□□ 0.17
MAP1LC3B-208ENST00000570189 NBPF19A0A087WUL8 3843 aa16.13■□□□□ 0.17
MAP1LC3B-208ENST00000570189 ANKUB1A6NFN9 424 aa16.13■□□□□ 0.17
MAP1LC3B-208ENST00000570189 GALR3O60755 368 aaPredicted RBP16.13■□□□□ 0.17
MAP1LC3B-208ENST00000570189 GSTA2P09210 222 aa16.13■□□□□ 0.17
MAP1LC3B-208ENST00000570189 EDN3P14138 238 aa16.13■□□□□ 0.17
MAP1LC3B-208ENST00000570189 GLRBP48167 497 aa16.13■□□□□ 0.17
MAP1LC3B-208ENST00000570189 TNFSF10P50591 281 aa16.13■□□□□ 0.17
MAP1LC3B-208ENST00000570189 PGGT1BP53609 377 aa16.13■□□□□ 0.17
MAP1LC3B-208ENST00000570189 POU4F1Q01851 419 aa16.13■□□□□ 0.17
MAP1LC3B-208ENST00000570189 CALCOCO2Q13137 446 aa16.13■□□□□ 0.17
MAP1LC3B-208ENST00000570189 CSHL1Q14406 222 aa16.13■□□□□ 0.17
MAP1LC3B-208ENST00000570189 EIF2S3LQ2VIR3 472 aaKnown RBP16.13■□□□□ 0.17
MAP1LC3B-208ENST00000570189 CDKL4Q5MAI5 379 aa16.13■□□□□ 0.17
MAP1LC3B-208ENST00000570189 H3F3CQ6NXT2 135 aa16.13■□□□□ 0.17
MAP1LC3B-208ENST00000570189 CPEB2Q7Z5Q1 589 aaKnown RBP16.13■□□□□ 0.17
MAP1LC3B-208ENST00000570189 ZNF740Q8NDX6 193 aa16.13■□□□□ 0.17
MAP1LC3B-208ENST00000570189 FAR1Q8WVX9 515 aa16.13■□□□□ 0.17
MAP1LC3B-208ENST00000570189 MACROD1Q9BQ69 325 aa16.13■□□□□ 0.17
MAP1LC3B-208ENST00000570189 SLX1AQ9BQ83 275 aa16.13■□□□□ 0.17
MAP1LC3B-208ENST00000570189 DERL2Q9GZP9 239 aa16.13■□□□□ 0.17
MAP1LC3B-208ENST00000570189 LRRC4CQ9HCJ2 640 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms