RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 CLEC18CQ8NCF0 446 aa13.69□□□□□ -0.22
CMTM3-215ENST00000568477 ABHD11Q8NFV4 315 aa13.69□□□□□ -0.22
CMTM3-215ENST00000568477 PYCR2Q96C36 320 aa13.69□□□□□ -0.22
CMTM3-215ENST00000568477 VPS39Q96JC1 886 aa13.69□□□□□ -0.22
CMTM3-215ENST00000568477 MACROD1Q9BQ69 325 aa13.69□□□□□ -0.22
CMTM3-215ENST00000568477 WDR77Q9BQA1 342 aaPredicted RBP13.69□□□□□ -0.22
CMTM3-215ENST00000568477 RHOJQ9H4E5 214 aa13.69□□□□□ -0.22
CMTM3-215ENST00000568477 EPS8L2Q9H6S3 715 aa13.69□□□□□ -0.22
CMTM3-215ENST00000568477 SAYSD1Q9NPB0 183 aa13.69□□□□□ -0.22
CMTM3-215ENST00000568477 NOVA2Q9UNW9 492 aaKnown RBP13.69□□□□□ -0.22
CMTM3-215ENST00000568477 A0A1W2PQ72 361 aa13.68□□□□□ -0.22
CMTM3-215ENST00000568477 NPEPPSL1A6NEC2 478 aa13.68□□□□□ -0.22
CMTM3-215ENST00000568477 EIF3HO15372 352 aaKnown RBP eCLIP13.68□□□□□ -0.22
CMTM3-215ENST00000568477 SLC35G6P0C7Q6 338 aa13.68□□□□□ -0.22
CMTM3-215ENST00000568477 COX6A1P12074 109 aa13.68□□□□□ -0.22
CMTM3-215ENST00000568477 IL1RNP18510 177 aa13.68□□□□□ -0.22
CMTM3-215ENST00000568477 EEF1A2Q05639 463 aaKnown RBP13.68□□□□□ -0.22
CMTM3-215ENST00000568477 ZNF460Q14592 562 aa13.68□□□□□ -0.22
CMTM3-215ENST00000568477 PPP1R3AQ16821 1122 aa13.68□□□□□ -0.22
CMTM3-215ENST00000568477 ZXDCQ2QGD7 858 aaPredicted RBP13.68□□□□□ -0.22
CMTM3-215ENST00000568477 FAAH2Q6GMR7 532 aa13.68□□□□□ -0.22
CMTM3-215ENST00000568477 TMEM214Q6NUQ4 689 aaKnown RBP13.68□□□□□ -0.22
CMTM3-215ENST00000568477 SBSNQ6UWP8 590 aa13.68□□□□□ -0.22
CMTM3-215ENST00000568477 IGFL2Q6UWQ7 119 aa13.68□□□□□ -0.22
CMTM3-215ENST00000568477 TMEM207Q6UWW9 146 aa13.68□□□□□ -0.22
CMTM3-215ENST00000568477 IFT20Q8IY31 132 aa13.68□□□□□ -0.22
CMTM3-215ENST00000568477 TBC1D19Q8N5T2 526 aa13.68□□□□□ -0.22
CMTM3-215ENST00000568477 EIF1ADQ8N9N8 165 aaKnown RBP13.68□□□□□ -0.22
CMTM3-215ENST00000568477 MFSD9Q8NBP5 474 aa13.68□□□□□ -0.22
CMTM3-215ENST00000568477 ZCCHC10Q8TBK6 192 aa13.68□□□□□ -0.22
CMTM3-215ENST00000568477 PPP4R1Q8TF05 950 aa13.68□□□□□ -0.22
CMTM3-215ENST00000568477 SLC13A3Q8WWT9 602 aa13.68□□□□□ -0.22
CMTM3-215ENST00000568477 TM4SF19Q96DZ7 209 aa13.68□□□□□ -0.22
CMTM3-215ENST00000568477 OR4K3Q96R72 315 aa13.68□□□□□ -0.22
CMTM3-215ENST00000568477 ANKHQ9HCJ1 492 aa13.68□□□□□ -0.22
CMTM3-215ENST00000568477 RIC8BQ9NVN3 520 aa13.68□□□□□ -0.22
CMTM3-215ENST00000568477 DMGDHQ9UI17 866 aaKnown RBP13.68□□□□□ -0.22
CMTM3-215ENST00000568477 IKZF3Q9UKT9 509 aa13.68□□□□□ -0.22
CMTM3-215ENST00000568477 MKL2Q9ULH7 1088 aa13.68□□□□□ -0.22
CMTM3-215ENST00000568477 SPENQ96T58 3664 aaKnown RBP13.68□□□□□ -0.22
CMTM3-215ENST00000568477 RELNP78509 3460 aa13.68□□□□□ -0.22
CMTM3-215ENST00000568477 MAST4O15021 2626 aa13.67□□□□□ -0.22
CMTM3-215ENST00000568477 IGHV1-45A0A0A0MS14 117 aa13.67□□□□□ -0.22
CMTM3-215ENST00000568477 TRBC2A0A5B9 178 aa13.67□□□□□ -0.22
CMTM3-215ENST00000568477 CDC7O00311 574 aa13.67□□□□□ -0.22
CMTM3-215ENST00000568477 LCMT2O60294 686 aaKnown RBP13.67□□□□□ -0.22
CMTM3-215ENST00000568477 BMP10O95393 424 aa13.67□□□□□ -0.22
CMTM3-215ENST00000568477 CYC1P08574 325 aa13.67□□□□□ -0.22
CMTM3-215ENST00000568477 SLC12A2P55011 1212 aa13.67□□□□□ -0.22
CMTM3-215ENST00000568477 SNRPNP63162 240 aaKnown RBP13.67□□□□□ -0.22
CMTM3-215ENST00000568477 CSHL1Q14406 222 aa13.67□□□□□ -0.22
CMTM3-215ENST00000568477 BEND6Q5SZJ8 279 aaPredicted RBP13.67□□□□□ -0.22
CMTM3-215ENST00000568477 MFSD4BQ5TF39 518 aa13.67□□□□□ -0.22
CMTM3-215ENST00000568477 ISLR2Q6UXK2 745 aa13.67□□□□□ -0.22
CMTM3-215ENST00000568477 PRSS41Q7RTY9 318 aa13.67□□□□□ -0.22
CMTM3-215ENST00000568477 ADAMTSL2Q86TH1 951 aa13.67□□□□□ -0.22
CMTM3-215ENST00000568477 CUZD1Q86UP6 607 aa13.67□□□□□ -0.22
CMTM3-215ENST00000568477 CISD2Q8N5K1 135 aaKnown RBP13.67□□□□□ -0.22
CMTM3-215ENST00000568477 KCT2Q8NC54 265 aa13.67□□□□□ -0.22
CMTM3-215ENST00000568477 OR4K1Q8NGD4 311 aa13.67□□□□□ -0.22
CMTM3-215ENST00000568477 SLC5A11Q8WWX8 675 aa13.67□□□□□ -0.22
CMTM3-215ENST00000568477 METTL21AQ8WXB1 218 aa13.67□□□□□ -0.22
CMTM3-215ENST00000568477 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.67□□□□□ -0.22
CMTM3-215ENST00000568477 CDKL2Q92772 493 aa13.67□□□□□ -0.22
CMTM3-215ENST00000568477 SNRNP40Q96DI7 357 aaKnown RBP13.67□□□□□ -0.22
CMTM3-215ENST00000568477 POPDC3Q9HBV1 291 aa13.67□□□□□ -0.22
CMTM3-215ENST00000568477 GPAMQ9HCL2 828 aa13.67□□□□□ -0.22
CMTM3-215ENST00000568477 SMYD2Q9NRG4 433 aa13.67□□□□□ -0.22
CMTM3-215ENST00000568477 HCN3Q9P1Z3 774 aa13.67□□□□□ -0.22
CMTM3-215ENST00000568477 TXNDC16Q9P2K2 825 aa13.67□□□□□ -0.22
CMTM3-215ENST00000568477 UTP11Q9Y3A2 253 aaKnown RBP13.67□□□□□ -0.22
CMTM3-215ENST00000568477 DYRK1BQ9Y463 629 aa13.67□□□□□ -0.22
CMTM3-215ENST00000568477 PCDHGA10Q9Y5H3 936 aa13.67□□□□□ -0.22
CMTM3-215ENST00000568477 COL12A1Q99715 3063 aa13.66□□□□□ -0.22
CMTM3-215ENST00000568477 NAV2Q8IVL1 2488 aa13.66□□□□□ -0.22
CMTM3-215ENST00000568477 LOC102723996A0A087X1L8 192 aa13.66□□□□□ -0.22
CMTM3-215ENST00000568477 TCP11X1B4DZS4 312 aa13.66□□□□□ -0.22
CMTM3-215ENST00000568477 SGK494L7N484 410 aa13.66□□□□□ -0.22
CMTM3-215ENST00000568477 NDUFS4O43181 175 aa13.66□□□□□ -0.22
CMTM3-215ENST00000568477 OR1F1O43749 312 aa13.66□□□□□ -0.22
CMTM3-215ENST00000568477 JRKO75564 520 aa13.66□□□□□ -0.22
CMTM3-215ENST00000568477 KLHL18O94889 574 aa13.66□□□□□ -0.22
CMTM3-215ENST00000568477 SERPINA7P05543 415 aa13.66□□□□□ -0.22
CMTM3-215ENST00000568477 PRR35P0CG20 571 aa13.66□□□□□ -0.22
CMTM3-215ENST00000568477 C8orf89P0DMQ9 161 aa13.66□□□□□ -0.22
CMTM3-215ENST00000568477 SSTR1P30872 391 aa13.66□□□□□ -0.22
CMTM3-215ENST00000568477 XCR1P46094 333 aa13.66□□□□□ -0.22
CMTM3-215ENST00000568477 CDKL1Q00532 357 aa13.66□□□□□ -0.22
CMTM3-215ENST00000568477 POU4F1Q01851 419 aa13.66□□□□□ -0.22
CMTM3-215ENST00000568477 MEF2AQ02078 507 aaPredicted RBP13.66□□□□□ -0.22
CMTM3-215ENST00000568477 SRSF1Q07955 248 aaKnown RBP eCLIP13.66□□□□□ -0.22
CMTM3-215ENST00000568477 MFAP5Q13361 173 aa13.66□□□□□ -0.22
CMTM3-215ENST00000568477 MINDY4Q4G0A6 757 aa13.66□□□□□ -0.22
CMTM3-215ENST00000568477 CRB2Q5IJ48 1285 aa13.66□□□□□ -0.22
CMTM3-215ENST00000568477 CATSPEREQ5SY80 951 aa13.66□□□□□ -0.22
CMTM3-215ENST00000568477 TMEM205Q6UW68 189 aa13.66□□□□□ -0.22
CMTM3-215ENST00000568477 LINC00696Q6ZRV3 163 aa13.66□□□□□ -0.22
CMTM3-215ENST00000568477 FRA10AC1Q70Z53 315 aa13.66□□□□□ -0.22
CMTM3-215ENST00000568477 THOC6Q86W42 341 aaKnown RBP13.66□□□□□ -0.22
CMTM3-215ENST00000568477 CEP97Q8IW35 865 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms