RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 NT5CQ8TCD5 201 aa17.16■□□□□ 0.34
COMMD4-222ENST00000568034 PPP4R1Q8TF05 950 aa17.16■□□□□ 0.34
COMMD4-222ENST00000568034 AGAP11Q8TF27 550 aa17.16■□□□□ 0.34
COMMD4-222ENST00000568034 RERGQ96A58 199 aaPredicted RBP17.16■□□□□ 0.34
COMMD4-222ENST00000568034 ZNF578Q96N58 590 aaPredicted RBP17.16■□□□□ 0.34
COMMD4-222ENST00000568034 MACROD1Q9BQ69 325 aa17.16■□□□□ 0.34
COMMD4-222ENST00000568034 ULBP3Q9BZM4 244 aa17.16■□□□□ 0.34
COMMD4-222ENST00000568034 RHBGQ9H310 441 aa17.16■□□□□ 0.34
COMMD4-222ENST00000568034 ACBD3Q9H3P7 528 aa17.16■□□□□ 0.34
COMMD4-222ENST00000568034 THSD1Q9NS62 852 aa17.16■□□□□ 0.34
COMMD4-222ENST00000568034 DKK4Q9UBT3 224 aa17.16■□□□□ 0.34
COMMD4-222ENST00000568034 MRPS2Q9Y399 296 aaKnown RBP17.16■□□□□ 0.34
COMMD4-222ENST00000568034 SEC16AO15027 2179 aa17.16■□□□□ 0.34
COMMD4-222ENST00000568034 APC2O95996 2303 aa17.15■□□□□ 0.34
COMMD4-222ENST00000568034 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.15■□□□□ 0.34
COMMD4-222ENST00000568034 H0YIV9 168 aa17.15■□□□□ 0.34
COMMD4-222ENST00000568034 BIRC5O15392 142 aa17.15■□□□□ 0.34
COMMD4-222ENST00000568034 CLDN9O95484 217 aa17.15■□□□□ 0.34
COMMD4-222ENST00000568034 MLYCDO95822 493 aa17.15■□□□□ 0.34
COMMD4-222ENST00000568034 OTCP00480 354 aa17.15■□□□□ 0.34
COMMD4-222ENST00000568034 NTRK1P04629 796 aa17.15■□□□□ 0.34
COMMD4-222ENST00000568034 GRM7Q14831 915 aa17.15■□□□□ 0.34
COMMD4-222ENST00000568034 ZNF385CQ66K41 422 aaPredicted RBP17.15■□□□□ 0.34
COMMD4-222ENST00000568034 RHBDD2Q6NTF9 364 aa17.15■□□□□ 0.34
COMMD4-222ENST00000568034 MED27Q6P2C8 311 aa17.15■□□□□ 0.34
COMMD4-222ENST00000568034 MILR1Q7Z6M3 343 aa17.15■□□□□ 0.34
COMMD4-222ENST00000568034 ZFAND4Q86XD8 727 aa17.15■□□□□ 0.34
COMMD4-222ENST00000568034 DTWD1Q8N5C7 304 aa17.15■□□□□ 0.34
COMMD4-222ENST00000568034 TBC1D19Q8N5T2 526 aa17.15■□□□□ 0.34
COMMD4-222ENST00000568034 GOLGA6L1Q8N7Z2 621 aa17.15■□□□□ 0.34
COMMD4-222ENST00000568034 OR7G3Q8NG95 312 aa17.15■□□□□ 0.34
COMMD4-222ENST00000568034 ACTR5Q9H9F9 607 aaPredicted RBP17.15■□□□□ 0.34
COMMD4-222ENST00000568034 TNFRSF12AQ9NP84 129 aa17.15■□□□□ 0.34
COMMD4-222ENST00000568034 TRPS1Q9UHF7 1281 aa17.15■□□□□ 0.34
COMMD4-222ENST00000568034 TSC22D4Q9Y3Q8 395 aa17.15■□□□□ 0.34
COMMD4-222ENST00000568034 TEX51A0A1B0GUA7 166 aa17.14■□□□□ 0.33
COMMD4-222ENST00000568034 WDR91A4D1P6 747 aa17.14■□□□□ 0.33
COMMD4-222ENST00000568034 C1QTNF9BB2RNN3 333 aa17.14■□□□□ 0.33
COMMD4-222ENST00000568034 NDUFS4O43181 175 aa17.14■□□□□ 0.33
COMMD4-222ENST00000568034 TLX3O43711 291 aaPredicted RBP17.14■□□□□ 0.33
COMMD4-222ENST00000568034 CPNE3O75131 537 aaKnown RBP17.14■□□□□ 0.33
COMMD4-222ENST00000568034 OR4F21O95013 312 aa17.14■□□□□ 0.33
COMMD4-222ENST00000568034 C1QTNF9P0C862 333 aa17.14■□□□□ 0.33
COMMD4-222ENST00000568034 ITGAXP20702 1163 aa17.14■□□□□ 0.33
COMMD4-222ENST00000568034 CD82P27701 267 aa17.14■□□□□ 0.33
COMMD4-222ENST00000568034 GSTM2P28161 218 aa17.14■□□□□ 0.33
COMMD4-222ENST00000568034 HPDP32754 393 aaPredicted RBP17.14■□□□□ 0.33
COMMD4-222ENST00000568034 EMP3P54852 163 aa17.14■□□□□ 0.33
COMMD4-222ENST00000568034 NAA20P61599 178 aa17.14■□□□□ 0.33
COMMD4-222ENST00000568034 GPS2Q13227 327 aa17.14■□□□□ 0.33
COMMD4-222ENST00000568034 PWP1Q13610 501 aa17.14■□□□□ 0.33
COMMD4-222ENST00000568034 ZRSR2Q15696 482 aaKnown RBP17.14■□□□□ 0.33
COMMD4-222ENST00000568034 CPSF6Q16630 551 aaKnown RBP eCLIP17.14■□□□□ 0.33
COMMD4-222ENST00000568034 CFAP157Q5JU67 520 aa17.14■□□□□ 0.33
COMMD4-222ENST00000568034 TMEM214Q6NUQ4 689 aaKnown RBP17.14■□□□□ 0.33
COMMD4-222ENST00000568034 GPRIN3Q6ZVF9 776 aa17.14■□□□□ 0.33
COMMD4-222ENST00000568034 DTX1Q86Y01 620 aa17.14■□□□□ 0.33
COMMD4-222ENST00000568034 MYLK4Q86YV6 388 aaPredicted RBP17.14■□□□□ 0.33
COMMD4-222ENST00000568034 NUDCD3Q8IVD9 361 aa17.14■□□□□ 0.33
COMMD4-222ENST00000568034 KCT2Q8NC54 265 aa17.14■□□□□ 0.33
COMMD4-222ENST00000568034 CAMKVQ8NCB2 501 aa17.14■□□□□ 0.33
COMMD4-222ENST00000568034 TTLQ8NG68 377 aa17.14■□□□□ 0.33
COMMD4-222ENST00000568034 WDR20Q8TBZ3 569 aa17.14■□□□□ 0.33
COMMD4-222ENST00000568034 MGARPQ8TDB4 240 aa17.14■□□□□ 0.33
COMMD4-222ENST00000568034 ZNF473Q8WTR7 871 aaKnown RBP17.14■□□□□ 0.33
COMMD4-222ENST00000568034 SLC13A3Q8WWT9 602 aa17.14■□□□□ 0.33
COMMD4-222ENST00000568034 ATP6V1E2Q96A05 226 aa17.14■□□□□ 0.33
COMMD4-222ENST00000568034 SEC16BQ96JE7 1060 aa17.14■□□□□ 0.33
COMMD4-222ENST00000568034 LRFN5Q96NI6 719 aa17.14■□□□□ 0.33
COMMD4-222ENST00000568034 GBP5Q96PP8 586 aa17.14■□□□□ 0.33
COMMD4-222ENST00000568034 SLC6A16Q9GZN6 736 aa17.14■□□□□ 0.33
COMMD4-222ENST00000568034 CUTCQ9NTM9 273 aa17.14■□□□□ 0.33
COMMD4-222ENST00000568034 IRAK4Q9NWZ3 460 aa17.14■□□□□ 0.33
COMMD4-222ENST00000568034 DHCR7Q9UBM7 475 aaKnown RBP17.14■□□□□ 0.33
COMMD4-222ENST00000568034 HYKKA2RU49 373 aa17.13■□□□□ 0.33
COMMD4-222ENST00000568034 C4orf51C9J302 202 aa17.13■□□□□ 0.33
COMMD4-222ENST00000568034 NPHS1O60500 1241 aa17.13■□□□□ 0.33
COMMD4-222ENST00000568034 CLEC3AO75596 197 aa17.13■□□□□ 0.33
COMMD4-222ENST00000568034 ESRRBO95718 433 aa17.13■□□□□ 0.33
COMMD4-222ENST00000568034 CHRNGP07510 517 aa17.13■□□□□ 0.33
COMMD4-222ENST00000568034 SLC35G6P0C7Q6 338 aa17.13■□□□□ 0.33
COMMD4-222ENST00000568034 PKNOX1P55347 436 aa17.13■□□□□ 0.33
COMMD4-222ENST00000568034 ASPHQ12797 758 aa17.13■□□□□ 0.33
COMMD4-222ENST00000568034 HIST2H2ACQ16777 129 aaPredicted RBP17.13■□□□□ 0.33
COMMD4-222ENST00000568034 YOD1Q5VVQ6 348 aaPredicted RBP17.13■□□□□ 0.33
COMMD4-222ENST00000568034 GARNL3Q5VVW2 1013 aa17.13■□□□□ 0.33
COMMD4-222ENST00000568034 HIST2H2AA3Q6FI13 130 aa17.13■□□□□ 0.33
COMMD4-222ENST00000568034 RNF175Q8N4F7 328 aa17.13■□□□□ 0.33
COMMD4-222ENST00000568034 TTC29Q8NA56 475 aaPredicted RBP17.13■□□□□ 0.33
COMMD4-222ENST00000568034 GALNT6Q8NCL4 622 aa17.13■□□□□ 0.33
COMMD4-222ENST00000568034 TRPV3Q8NET8 790 aa17.13■□□□□ 0.33
COMMD4-222ENST00000568034 UBE2E3Q969T4 207 aa17.13■□□□□ 0.33
COMMD4-222ENST00000568034 AKIRIN1Q9H9L7 192 aaPredicted RBP17.13■□□□□ 0.33
COMMD4-222ENST00000568034 SRPK3Q9UPE1 567 aa17.13■□□□□ 0.33
COMMD4-222ENST00000568034 STK38LQ9Y2H1 464 aa17.13■□□□□ 0.33
COMMD4-222ENST00000568034 IGF2RP11717 2491 aa17.13■□□□□ 0.33
COMMD4-222ENST00000568034 FREM2Q5SZK8 3169 aa17.13■□□□□ 0.33
COMMD4-222ENST00000568034 STMND1H3BQB6 276 aa17.12■□□□□ 0.33
COMMD4-222ENST00000568034 H3BQF6 201 aa17.12■□□□□ 0.33
COMMD4-222ENST00000568034 TXNDC9O14530 226 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms