RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 OR4K1Q8NGD4 311 aa14.15□□□□□ -0.14
RNF40-209ENST00000566703 SLC13A3Q8WWT9 602 aa14.15□□□□□ -0.14
RNF40-209ENST00000566703 MS4A14Q96JA4 679 aa14.15□□□□□ -0.14
RNF40-209ENST00000566703 OR1F2PQ96R84 312 aa14.15□□□□□ -0.14
RNF40-209ENST00000566703 MMP25Q9NPA2 562 aa14.15□□□□□ -0.14
RNF40-209ENST00000566703 ADAMTS6Q9UKP5 1117 aa14.15□□□□□ -0.14
RNF40-209ENST00000566703 ZGRF1Q86YA3 2104 aa14.14□□□□□ -0.15
RNF40-209ENST00000566703 SGK494L7N484 410 aa14.14□□□□□ -0.15
RNF40-209ENST00000566703 PGRMC1O00264 195 aaKnown RBP14.14□□□□□ -0.15
RNF40-209ENST00000566703 UNC5CO95185 931 aa14.14□□□□□ -0.15
RNF40-209ENST00000566703 F10P00742 488 aa14.14□□□□□ -0.15
RNF40-209ENST00000566703 F7P08709 466 aaPredicted RBP14.14□□□□□ -0.15
RNF40-209ENST00000566703 SLC35G6P0C7Q6 338 aa14.14□□□□□ -0.15
RNF40-209ENST00000566703 IL1RNP18510 177 aa14.14□□□□□ -0.15
RNF40-209ENST00000566703 MST1P26927 711 aa14.14□□□□□ -0.15
RNF40-209ENST00000566703 CA7P43166 264 aa14.14□□□□□ -0.15
RNF40-209ENST00000566703 HERC3Q15034 1050 aa14.14□□□□□ -0.15
RNF40-209ENST00000566703 MEP1AQ16819 746 aa14.14□□□□□ -0.15
RNF40-209ENST00000566703 SPANXN3Q5MJ09 141 aa14.14□□□□□ -0.15
RNF40-209ENST00000566703 RNASEH2BQ5TBB1 312 aaKnown RBP14.14□□□□□ -0.15
RNF40-209ENST00000566703 DUPD1Q68J44 220 aa14.14□□□□□ -0.15
RNF40-209ENST00000566703 PAQR3Q6TCH7 311 aa14.14□□□□□ -0.15
RNF40-209ENST00000566703 LANCL3Q6ZV70 420 aa14.14□□□□□ -0.15
RNF40-209ENST00000566703 PRSS41Q7RTY9 318 aa14.14□□□□□ -0.15
RNF40-209ENST00000566703 SLC26A11Q86WA9 606 aa14.14□□□□□ -0.15
RNF40-209ENST00000566703 KCT2Q8NC54 265 aa14.14□□□□□ -0.15
RNF40-209ENST00000566703 ACTRT1Q8TDG2 376 aa14.14□□□□□ -0.15
RNF40-209ENST00000566703 MARVELD3Q96A59 401 aa14.14□□□□□ -0.15
RNF40-209ENST00000566703 LPAR4Q99677 370 aa14.14□□□□□ -0.15
RNF40-209ENST00000566703 TRIM54Q9BYV2 358 aa14.14□□□□□ -0.15
RNF40-209ENST00000566703 ATG10Q9H0Y0 220 aa14.14□□□□□ -0.15
RNF40-209ENST00000566703 CLK4Q9HAZ1 481 aaKnown RBP14.14□□□□□ -0.15
RNF40-209ENST00000566703 KCNK13Q9HB14 408 aa14.14□□□□□ -0.15
RNF40-209ENST00000566703 HCN3Q9P1Z3 774 aa14.14□□□□□ -0.15
RNF40-209ENST00000566703 UNC79Q9P2D8 2635 aa14.14□□□□□ -0.15
RNF40-209ENST00000566703 IGHV3-20A0A0C4DH32 117 aa14.13□□□□□ -0.15
RNF40-209ENST00000566703 GOLGA6L10A0A0M3HER8 536 aa14.13□□□□□ -0.15
RNF40-209ENST00000566703 FEZF1A0PJY2 475 aa14.13□□□□□ -0.15
RNF40-209ENST00000566703 MAGEB17A8MXT2 336 aa14.13□□□□□ -0.15
RNF40-209ENST00000566703 PRSS44E7EML9 344 aa14.13□□□□□ -0.15
RNF40-209ENST00000566703 TTI1O43156 1089 aa14.13□□□□□ -0.15
RNF40-209ENST00000566703 MLYCDO95822 493 aa14.13□□□□□ -0.15
RNF40-209ENST00000566703 AHSGP02765 367 aa14.13□□□□□ -0.15
RNF40-209ENST00000566703 STATHP02808 62 aa14.13□□□□□ -0.15
RNF40-209ENST00000566703 GABRB3P28472 473 aa14.13□□□□□ -0.15
RNF40-209ENST00000566703 CCR8P51685 355 aa14.13□□□□□ -0.15
RNF40-209ENST00000566703 CASP6P55212 293 aa14.13□□□□□ -0.15
RNF40-209ENST00000566703 AP1S2P56377 157 aa14.13□□□□□ -0.15
RNF40-209ENST00000566703 IL2P60568 153 aa14.13□□□□□ -0.15
RNF40-209ENST00000566703 SKP1P63208 163 aa14.13□□□□□ -0.15
RNF40-209ENST00000566703 ACTN3Q08043 901 aaPredicted RBP14.13□□□□□ -0.15
RNF40-209ENST00000566703 PWP1Q13610 501 aa14.13□□□□□ -0.15
RNF40-209ENST00000566703 CRYMQ14894 314 aa14.13□□□□□ -0.15
RNF40-209ENST00000566703 NSDHLQ15738 373 aa14.13□□□□□ -0.15
RNF40-209ENST00000566703 KRTCAP3Q53RY4 240 aa14.13□□□□□ -0.15
RNF40-209ENST00000566703 ZNF766Q5HY98 468 aa14.13□□□□□ -0.15
RNF40-209ENST00000566703 RPTNQ6XPR3 784 aa14.13□□□□□ -0.15
RNF40-209ENST00000566703 STRA8Q7Z7C7 330 aa14.13□□□□□ -0.15
RNF40-209ENST00000566703 SPNS2Q8IVW8 549 aa14.13□□□□□ -0.15
RNF40-209ENST00000566703 CNTN4Q8IWV2 1026 aa14.13□□□□□ -0.15
RNF40-209ENST00000566703 LGI4Q8N135 537 aa14.13□□□□□ -0.15
RNF40-209ENST00000566703 AFAP1L2Q8N4X5 818 aa14.13□□□□□ -0.15
RNF40-209ENST00000566703 TBC1D19Q8N5T2 526 aa14.13□□□□□ -0.15
RNF40-209ENST00000566703 OR56A3Q8NH54 315 aa14.13□□□□□ -0.15
RNF40-209ENST00000566703 THAP3Q8WTV1 239 aaPredicted RBP14.13□□□□□ -0.15
RNF40-209ENST00000566703 ITLN2Q8WWU7 325 aaPredicted RBP14.13□□□□□ -0.15
RNF40-209ENST00000566703 ATL1Q8WXF7 558 aa14.13□□□□□ -0.15
RNF40-209ENST00000566703 NDNQ99608 321 aa14.13□□□□□ -0.15
RNF40-209ENST00000566703 MACROD1Q9BQ69 325 aa14.13□□□□□ -0.15
RNF40-209ENST00000566703 UTP23Q9BRU9 249 aaKnown RBP14.13□□□□□ -0.15
RNF40-209ENST00000566703 CORO1CQ9ULV4 474 aaPredicted RBP14.13□□□□□ -0.15
RNF40-209ENST00000566703 NAALAD2Q9Y3Q0 740 aa14.13□□□□□ -0.15
RNF40-209ENST00000566703 TRGV8A0A0C4DH27 118 aa14.12□□□□□ -0.15
RNF40-209ENST00000566703 TRBC2A0A5B9 178 aa14.12□□□□□ -0.15
RNF40-209ENST00000566703 PABPN1LA6NDY0 278 aaKnown RBP14.12□□□□□ -0.15
RNF40-209ENST00000566703 CCL21O00585 134 aa14.12□□□□□ -0.15
RNF40-209ENST00000566703 CES2O00748 559 aa14.12□□□□□ -0.15
RNF40-209ENST00000566703 CDH1P12830 882 aa14.12□□□□□ -0.15
RNF40-209ENST00000566703 TNFRSF8P28908 595 aa14.12□□□□□ -0.15
RNF40-209ENST00000566703 MEF2AQ02078 507 aaPredicted RBP14.12□□□□□ -0.15
RNF40-209ENST00000566703 RHAGQ02094 409 aa14.12□□□□□ -0.15
RNF40-209ENST00000566703 DHX9Q08211 1270 aaKnown RBP14.12□□□□□ -0.15
RNF40-209ENST00000566703 PAPD4Q6PIY7 484 aaKnown RBP14.12□□□□□ -0.15
RNF40-209ENST00000566703 XKRXQ6PP77 449 aa14.12□□□□□ -0.15
RNF40-209ENST00000566703 PDSS2Q86YH6 399 aa14.12□□□□□ -0.15
RNF40-209ENST00000566703 BEST3Q8N1M1 668 aa14.12□□□□□ -0.15
RNF40-209ENST00000566703 ZNF808Q8N4W9 903 aaPredicted RBP14.12□□□□□ -0.15
RNF40-209ENST00000566703 SLC5A8Q8N695 610 aa14.12□□□□□ -0.15
RNF40-209ENST00000566703 HORMAD2Q8N7B1 307 aa14.12□□□□□ -0.15
RNF40-209ENST00000566703 MDS2Q8NDY4 140 aa14.12□□□□□ -0.15
RNF40-209ENST00000566703 ALKBH8Q96BT7 664 aaKnown RBP14.12□□□□□ -0.15
RNF40-209ENST00000566703 LINGO1Q96FE5 620 aa14.12□□□□□ -0.15
RNF40-209ENST00000566703 SNF8Q96H20 258 aa14.12□□□□□ -0.15
RNF40-209ENST00000566703 PDLIM5Q96HC4 596 aaKnown RBP14.12□□□□□ -0.15
RNF40-209ENST00000566703 LANCL2Q9NS86 450 aa14.12□□□□□ -0.15
RNF40-209ENST00000566703 SH2B3Q9UQQ2 575 aa14.12□□□□□ -0.15
RNF40-209ENST00000566703 VWA7Q9Y334 891 aa14.12□□□□□ -0.15
RNF40-209ENST00000566703 CROCCQ5TZA2 2017 aa14.12□□□□□ -0.15
RNF40-209ENST00000566703 ARHGAP10A1A4S6 786 aa14.11□□□□□ -0.15
RNF40-209ENST00000566703 ASPDHA6ND91 283 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms