RNA–Protein interactions for RNA: ENST00000566078.1

CTCF-203, Transcript of CCCTC-binding factor, humanhuman

TSL 2

Gene CTCF, Length 1,627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-203ENST00000566078 CCDC167Q9P0B6 97 aa29.26■■■□□ 2.27
CTCF-203ENST00000566078 DLGAP4Q9Y2H0 992 aa29.26■■■□□ 2.27
CTCF-203ENST00000566078 SAP18O00422 153 aaKnown RBP29.25■■■□□ 2.27
CTCF-203ENST00000566078 PCDHGA12O60330 932 aa29.25■■■□□ 2.27
CTCF-203ENST00000566078 TBX6O95947 436 aaPredicted RBP29.25■■■□□ 2.27
CTCF-203ENST00000566078 COX4I1P13073 169 aa29.25■■■□□ 2.27
CTCF-203ENST00000566078 CALB2P22676 271 aa29.25■■■□□ 2.27
CTCF-203ENST00000566078 GSTM2P28161 218 aa29.25■■■□□ 2.27
CTCF-203ENST00000566078 PRDX6P30041 224 aa29.25■■■□□ 2.27
CTCF-203ENST00000566078 GPR3P46089 330 aa29.25■■■□□ 2.27
CTCF-203ENST00000566078 MRPL19P49406 292 aaKnown RBP29.25■■■□□ 2.27
CTCF-203ENST00000566078 NR1D2Q14995 579 aa29.25■■■□□ 2.27
CTCF-203ENST00000566078 C1orf52Q8N6N3 182 aaKnown RBP29.25■■■□□ 2.27
CTCF-203ENST00000566078 CREB3L4Q8TEY5 395 aa29.25■■■□□ 2.27
CTCF-203ENST00000566078 CCDC74AQ96AQ1 378 aa29.25■■■□□ 2.27
CTCF-203ENST00000566078 METTL2AQ96IZ6 378 aaKnown RBP29.25■■■□□ 2.27
CTCF-203ENST00000566078 SLC45A3Q96JT2 553 aa29.25■■■□□ 2.27
CTCF-203ENST00000566078 FCRL1Q96LA6 429 aa29.25■■■□□ 2.27
CTCF-203ENST00000566078 RUVBL1Q9Y265 456 aaKnown RBP29.25■■■□□ 2.27
CTCF-203ENST00000566078 AP1M2Q9Y6Q5 423 aa29.25■■■□□ 2.27
CTCF-203ENST00000566078 UNC13CQ8NB66 2214 aa29.25■■■□□ 2.27
CTCF-203ENST00000566078 IGHV1OR21-1A0A087WYE8 117 aa29.24■■■□□ 2.27
CTCF-203ENST00000566078 CLEC3AO75596 197 aa29.24■■■□□ 2.27
CTCF-203ENST00000566078 UNC5CO95185 931 aa29.24■■■□□ 2.27
CTCF-203ENST00000566078 BCKDHAP12694 445 aa29.24■■■□□ 2.27
CTCF-203ENST00000566078 CPA2P48052 419 aa29.24■■■□□ 2.27
CTCF-203ENST00000566078 NOXRED1Q6NXP6 359 aa29.24■■■□□ 2.27
CTCF-203ENST00000566078 SNX32Q86XE0 403 aa29.24■■■□□ 2.27
CTCF-203ENST00000566078 PARP9Q8IXQ6 854 aa29.24■■■□□ 2.27
CTCF-203ENST00000566078 Q8N9G6 341 aaPredicted RBP29.24■■■□□ 2.27
CTCF-203ENST00000566078 FAM181AQ8N9Y4 354 aa29.24■■■□□ 2.27
CTCF-203ENST00000566078 EBPLQ9BY08 206 aa29.24■■■□□ 2.27
CTCF-203ENST00000566078 ZMYND15Q9H091 742 aa29.24■■■□□ 2.27
CTCF-203ENST00000566078 EPB41L1Q9H4G0 881 aa29.24■■■□□ 2.27
CTCF-203ENST00000566078 SYNPO2LQ9H987 977 aa29.24■■■□□ 2.27
CTCF-203ENST00000566078 LY6G6EA0A0G2JKS1 128 aa29.23■■■□□ 2.27
CTCF-203ENST00000566078 CAPN5O15484 640 aaPredicted RBP29.23■■■□□ 2.27
CTCF-203ENST00000566078 MYO1DO94832 1006 aa29.23■■■□□ 2.27
CTCF-203ENST00000566078 STATHP02808 62 aa29.23■■■□□ 2.27
CTCF-203ENST00000566078 GFERP55789 205 aa29.23■■■□□ 2.27
CTCF-203ENST00000566078 CUL3Q13618 768 aa29.23■■■□□ 2.27
CTCF-203ENST00000566078 HERC3Q15034 1050 aa29.23■■■□□ 2.27
CTCF-203ENST00000566078 KHDRBS2Q5VWX1 349 aaKnown RBP29.23■■■□□ 2.27
CTCF-203ENST00000566078 FAM92BQ6ZTR7 304 aa29.23■■■□□ 2.27
CTCF-203ENST00000566078 CHTF18Q8WVB6 975 aa29.23■■■□□ 2.27
CTCF-203ENST00000566078 NCSTNQ92542 709 aa29.23■■■□□ 2.27
CTCF-203ENST00000566078 FCRL4Q96PJ5 515 aa29.23■■■□□ 2.27
CTCF-203ENST00000566078 U3KQA8 63 aa29.23■■■□□ 2.27
CTCF-203ENST00000566078 CACNA1HO95180 2353 aa29.23■■■□□ 2.27
CTCF-203ENST00000566078 LOC100653049A0A140TA62 436 aa29.23■■■□□ 2.27
CTCF-203ENST00000566078 DUX1O43812 170 aa29.23■■■□□ 2.27
CTCF-203ENST00000566078 CTSVO60911 334 aa29.23■■■□□ 2.27
CTCF-203ENST00000566078 ATP5HO75947 161 aa29.23■■■□□ 2.27
CTCF-203ENST00000566078 KRT34O76011 436 aa29.23■■■□□ 2.27
CTCF-203ENST00000566078 ACPPP15309 386 aa29.23■■■□□ 2.27
CTCF-203ENST00000566078 ST6GAL1P15907 406 aa29.23■■■□□ 2.27
CTCF-203ENST00000566078 ACADVLP49748 655 aa29.23■■■□□ 2.27
CTCF-203ENST00000566078 UFM1P61960 85 aa29.23■■■□□ 2.27
CTCF-203ENST00000566078 PTGR1Q14914 329 aa29.23■■■□□ 2.27
CTCF-203ENST00000566078 TRPV3Q8NET8 790 aa29.23■■■□□ 2.27
CTCF-203ENST00000566078 OR6C4Q8NGE1 309 aa29.23■■■□□ 2.27
CTCF-203ENST00000566078 TGM7Q96PF1 710 aa29.23■■■□□ 2.27
CTCF-203ENST00000566078 F2RL3Q96RI0 385 aa29.23■■■□□ 2.27
CTCF-203ENST00000566078 ZIM2Q9NZV7 527 aa29.23■■■□□ 2.27
CTCF-203ENST00000566078 WDR87Q6ZQQ6 2873 aa29.22■■■□□ 2.27
CTCF-203ENST00000566078 NDUFS4O43181 175 aa29.22■■■□□ 2.27
CTCF-203ENST00000566078 PRAMEF10O60809 474 aa29.22■■■□□ 2.27
CTCF-203ENST00000566078 PRPS2P11908 318 aa29.22■■■□□ 2.27
CTCF-203ENST00000566078 SDC1P18827 310 aa29.22■■■□□ 2.27
CTCF-203ENST00000566078 MAPRE2Q15555 327 aa29.22■■■□□ 2.27
CTCF-203ENST00000566078 ZIC1Q15915 447 aa29.22■■■□□ 2.27
CTCF-203ENST00000566078 AMZ1Q400G9 498 aa29.22■■■□□ 2.27
CTCF-203ENST00000566078 DEPDC1Q5TB30 811 aa29.22■■■□□ 2.27
CTCF-203ENST00000566078 FBXO42Q6P3S6 717 aa29.22■■■□□ 2.27
CTCF-203ENST00000566078 GUSBP11Q6P575 273 aa29.22■■■□□ 2.27
CTCF-203ENST00000566078 TRAPPC9Q96Q05 1148 aa29.22■■■□□ 2.27
CTCF-203ENST00000566078 RAB33BQ9H082 229 aa29.22■■■□□ 2.27
CTCF-203ENST00000566078 A0A0J9YVX5 310 aa29.21■■■□□ 2.27
CTCF-203ENST00000566078 LNP1A1A4G5 178 aa29.21■■■□□ 2.27
CTCF-203ENST00000566078 SLC22A3O75751 556 aa29.21■■■□□ 2.27
CTCF-203ENST00000566078 THRAP10827 490 aa29.21■■■□□ 2.27
CTCF-203ENST00000566078 HNRNPH2P55795 449 aaKnown RBP29.21■■■□□ 2.27
CTCF-203ENST00000566078 NCALDP61601 193 aa29.21■■■□□ 2.27
CTCF-203ENST00000566078 RAE1P78406 368 aaKnown RBP29.21■■■□□ 2.27
CTCF-203ENST00000566078 GPLD1P80108 840 aa29.21■■■□□ 2.27
CTCF-203ENST00000566078 CYLC2Q14093 348 aaPredicted RBP29.21■■■□□ 2.27
CTCF-203ENST00000566078 COMMD6Q7Z4G1 85 aa29.21■■■□□ 2.27
CTCF-203ENST00000566078 FUNDC1Q8IVP5 155 aa29.21■■■□□ 2.27
CTCF-203ENST00000566078 METTL4Q8N3J2 472 aa29.21■■■□□ 2.27
CTCF-203ENST00000566078 C19orf47Q8N9M1 422 aaKnown RBP29.21■■■□□ 2.27
CTCF-203ENST00000566078 CLHC1Q8NHS4 586 aa29.21■■■□□ 2.27
CTCF-203ENST00000566078 RP9Q8TA86 221 aaKnown RBP29.21■■■□□ 2.27
CTCF-203ENST00000566078 C11orf24Q96F05 449 aaPredicted RBP29.21■■■□□ 2.27
CTCF-203ENST00000566078 TEX37Q96LM6 180 aa29.21■■■□□ 2.27
CTCF-203ENST00000566078 MAP3K3Q99759 626 aa29.21■■■□□ 2.27
CTCF-203ENST00000566078 ACTL8Q9H568 366 aa29.21■■■□□ 2.27
CTCF-203ENST00000566078 C1GALT1Q9NS00 363 aa29.21■■■□□ 2.27
CTCF-203ENST00000566078 BAIAP2L1Q9UHR4 511 aa29.21■■■□□ 2.27
CTCF-203ENST00000566078 PILRAQ9UKJ1 303 aa29.21■■■□□ 2.27
CTCF-203ENST00000566078 CPED1A4D0V7 1026 aa29.2■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms