RNA–Protein interactions for RNA: ENST00000565936.1

LINC01043-201, Transcript of long intergenic non-protein coding RNA 1043, humanhuman

TSL 1 (best) BASIC

Gene LINC01043, Length 6,897 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01043-201ENST00000565936 ZSWIM3Q96MP5 696 aa6.31□□□□□ -1.4
LINC01043-201ENST00000565936 MGME1Q9BQP7 344 aa6.31□□□□□ -1.4
LINC01043-201ENST00000565936 OR8D2Q9GZM6 311 aa6.31□□□□□ -1.4
LINC01043-201ENST00000565936 MRPL39Q9NYK5 338 aaKnown RBP6.31□□□□□ -1.4
LINC01043-201ENST00000565936 FZD4Q9ULV1 537 aa6.31□□□□□ -1.4
LINC01043-201ENST00000565936 TOGARAM1Q9Y4F4 1720 aa6.31□□□□□ -1.4
LINC01043-201ENST00000565936 LOC100506127A0A0U1RQW1 187 aa6.31□□□□□ -1.4
LINC01043-201ENST00000565936 UBE2QL1A1L167 161 aa6.31□□□□□ -1.4
LINC01043-201ENST00000565936 ENO4A6NNW6 628 aa6.31□□□□□ -1.4
LINC01043-201ENST00000565936 KRT36O76013 467 aa6.31□□□□□ -1.4
LINC01043-201ENST00000565936 TCF4P15884 667 aa6.31□□□□□ -1.4
LINC01043-201ENST00000565936 MATN1P21941 496 aa6.31□□□□□ -1.4
LINC01043-201ENST00000565936 CDH12P55289 794 aa6.31□□□□□ -1.4
LINC01043-201ENST00000565936 EMX2Q04743 252 aa6.31□□□□□ -1.4
LINC01043-201ENST00000565936 DMPKQ09013 629 aa6.31□□□□□ -1.4
LINC01043-201ENST00000565936 ST3GAL3Q11203 375 aa6.31□□□□□ -1.4
LINC01043-201ENST00000565936 TRAP1Q12931 704 aaKnown RBP6.31□□□□□ -1.4
LINC01043-201ENST00000565936 ZNF267Q14586 743 aaPredicted RBP6.31□□□□□ -1.4
LINC01043-201ENST00000565936 ZSWIM7Q19AV6 140 aa6.31□□□□□ -1.4
LINC01043-201ENST00000565936 Q6ZSR6 202 aa6.31□□□□□ -1.4
LINC01043-201ENST00000565936 SYVN1Q86TM6 617 aa6.31□□□□□ -1.4
LINC01043-201ENST00000565936 LRRTM3Q86VH5 581 aa6.31□□□□□ -1.4
LINC01043-201ENST00000565936 ZNF440Q8IYI8 595 aa6.31□□□□□ -1.4
LINC01043-201ENST00000565936 ACVR1CQ8NER5 493 aa6.31□□□□□ -1.4
LINC01043-201ENST00000565936 FKBP10Q96AY3 582 aa6.31□□□□□ -1.4
LINC01043-201ENST00000565936 CMKLR1Q99788 373 aa6.31□□□□□ -1.4
LINC01043-201ENST00000565936 DGCR6LQ9BY27 220 aa6.31□□□□□ -1.4
LINC01043-201ENST00000565936 TMLHEQ9NVH6 421 aa6.31□□□□□ -1.4
LINC01043-201ENST00000565936 PAPPA2Q9BXP8 1791 aa6.31□□□□□ -1.4
LINC01043-201ENST00000565936 DRGXA6NNA5 263 aa6.31□□□□□ -1.4
LINC01043-201ENST00000565936 FARS2O95363 451 aaKnown RBP6.31□□□□□ -1.4
LINC01043-201ENST00000565936 CD38P28907 300 aa6.31□□□□□ -1.4
LINC01043-201ENST00000565936 IRF9Q00978 393 aa6.31□□□□□ -1.4
LINC01043-201ENST00000565936 EML3Q32P44 896 aa6.31□□□□□ -1.4
LINC01043-201ENST00000565936 CLNKQ7Z7G1 428 aa6.31□□□□□ -1.4
LINC01043-201ENST00000565936 ZDHHC21Q8IVQ6 265 aa6.31□□□□□ -1.4
LINC01043-201ENST00000565936 PDPRQ8NCN5 879 aa6.31□□□□□ -1.4
LINC01043-201ENST00000565936 SORCS1Q8WY21 1168 aa6.31□□□□□ -1.4
LINC01043-201ENST00000565936 SLC25A36Q96CQ1 311 aa6.31□□□□□ -1.4
LINC01043-201ENST00000565936 COL21A1Q96P44 957 aa6.31□□□□□ -1.4
LINC01043-201ENST00000565936 LENG8Q96PV6 779 aaPredicted RBP6.31□□□□□ -1.4
LINC01043-201ENST00000565936 ZNF382Q96SR6 550 aa6.31□□□□□ -1.4
LINC01043-201ENST00000565936 NAA11Q9BSU3 229 aaPredicted RBP6.31□□□□□ -1.4
LINC01043-201ENST00000565936 SLC46A2Q9BY10 475 aa6.31□□□□□ -1.4
LINC01043-201ENST00000565936 CLEC4MQ9H2X3 399 aaPredicted RBP6.31□□□□□ -1.4
LINC01043-201ENST00000565936 REEP4Q9H6H4 257 aa6.31□□□□□ -1.4
LINC01043-201ENST00000565936 CSNK1G1Q9HCP0 422 aa6.31□□□□□ -1.4
LINC01043-201ENST00000565936 HCFC1R1Q9NWW0 138 aa6.31□□□□□ -1.4
LINC01043-201ENST00000565936 TIAM2Q8IVF5 1701 aa6.3□□□□□ -1.4
LINC01043-201ENST00000565936 SH3PXD2BA1X283 911 aa6.3□□□□□ -1.4
LINC01043-201ENST00000565936 MEIS3P2A8K0S8 358 aa6.3□□□□□ -1.4
LINC01043-201ENST00000565936 H7BY64 318 aa6.3□□□□□ -1.4
LINC01043-201ENST00000565936 BTN3A3O00478 584 aa6.3□□□□□ -1.4
LINC01043-201ENST00000565936 BCKDKO14874 412 aa6.3□□□□□ -1.4
LINC01043-201ENST00000565936 BRINP1O60477 761 aa6.3□□□□□ -1.4
LINC01043-201ENST00000565936 KLHL18O94889 574 aa6.3□□□□□ -1.4
LINC01043-201ENST00000565936 IL33O95760 270 aa6.3□□□□□ -1.4
LINC01043-201ENST00000565936 RAP2AP10114 183 aa6.3□□□□□ -1.4
LINC01043-201ENST00000565936 TCEA1P23193 301 aaKnown RBP6.3□□□□□ -1.4
LINC01043-201ENST00000565936 KCNJ2P63252 427 aa6.3□□□□□ -1.4
LINC01043-201ENST00000565936 SMAD4Q13485 552 aaKnown RBP6.3□□□□□ -1.4
LINC01043-201ENST00000565936 NPTX1Q15818 432 aa6.3□□□□□ -1.4
LINC01043-201ENST00000565936 PRPF38BQ5VTL8 546 aaKnown RBP6.3□□□□□ -1.4
LINC01043-201ENST00000565936 OR52E8Q6IFG1 317 aa6.3□□□□□ -1.4
LINC01043-201ENST00000565936 UBALD2Q8IYN6 164 aa6.3□□□□□ -1.4
LINC01043-201ENST00000565936 DEFB123Q8N688 67 aa6.3□□□□□ -1.4
LINC01043-201ENST00000565936 SHKBP1Q8TBC3 707 aa6.3□□□□□ -1.4
LINC01043-201ENST00000565936 SPPL3Q8TCT6 385 aa6.3□□□□□ -1.4
LINC01043-201ENST00000565936 OR5P2Q8WZ92 322 aa6.3□□□□□ -1.4
LINC01043-201ENST00000565936 CENPNQ96H22 339 aaPredicted RBP6.3□□□□□ -1.4
LINC01043-201ENST00000565936 PRAP1Q96NZ9 151 aa6.3□□□□□ -1.4
LINC01043-201ENST00000565936 PHF7Q9BWX1 381 aaPredicted RBP6.3□□□□□ -1.4
LINC01043-201ENST00000565936 LINC00597Q9H2U6 94 aa6.3□□□□□ -1.4
LINC01043-201ENST00000565936 PELI2Q9HAT8 420 aa6.3□□□□□ -1.4
LINC01043-201ENST00000565936 BLACEA4D250 179 aa6.3□□□□□ -1.4
LINC01043-201ENST00000565936 FAM72CH0Y354 149 aa6.3□□□□□ -1.4
LINC01043-201ENST00000565936 TOR1BO14657 336 aa6.3□□□□□ -1.4
LINC01043-201ENST00000565936 PDCD5O14737 125 aa6.3□□□□□ -1.4
LINC01043-201ENST00000565936 KHDRBS3O75525 346 aaKnown RBP6.3□□□□□ -1.4
LINC01043-201ENST00000565936 PGM3O95394 542 aa6.3□□□□□ -1.4
LINC01043-201ENST00000565936 P04436 131 aa6.3□□□□□ -1.4
LINC01043-201ENST00000565936 UQCRC2P22695 453 aa6.3□□□□□ -1.4
LINC01043-201ENST00000565936 FOLR3P41439 243 aa6.3□□□□□ -1.4
LINC01043-201ENST00000565936 GRIA1P42261 906 aa6.3□□□□□ -1.4
LINC01043-201ENST00000565936 DGCR6Q14129 220 aa6.3□□□□□ -1.4
LINC01043-201ENST00000565936 SERTAD2Q14140 314 aa6.3□□□□□ -1.4
LINC01043-201ENST00000565936 MED22Q15528 200 aa6.3□□□□□ -1.4
LINC01043-201ENST00000565936 FAM72AQ5TYM5 149 aa6.3□□□□□ -1.4
LINC01043-201ENST00000565936 FAM72DQ6L9T8 149 aa6.3□□□□□ -1.4
LINC01043-201ENST00000565936 SUSD1Q6UWL2 747 aa6.3□□□□□ -1.4
LINC01043-201ENST00000565936 GPR149Q86SP6 731 aa6.3□□□□□ -1.4
LINC01043-201ENST00000565936 FAM72BQ86X60 149 aa6.3□□□□□ -1.4
LINC01043-201ENST00000565936 UBE2J2Q8N2K1 259 aa6.3□□□□□ -1.4
LINC01043-201ENST00000565936 PQLC1Q8N2U9 271 aa6.3□□□□□ -1.4
LINC01043-201ENST00000565936 HBEGFQ99075 208 aa6.3□□□□□ -1.4
LINC01043-201ENST00000565936 PITHD1Q9GZP4 211 aaPredicted RBP6.3□□□□□ -1.4
LINC01043-201ENST00000565936 WBP1LQ9NX94 342 aa6.3□□□□□ -1.4
LINC01043-201ENST00000565936 GALPQ9UBC7 116 aa6.3□□□□□ -1.4
LINC01043-201ENST00000565936 PLCL2Q9UPR0 1127 aa6.3□□□□□ -1.4
LINC01043-201ENST00000565936 KCTD3Q9Y597 815 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms