RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 UNC13CQ8NB66 2214 aa17.94■□□□□ 0.46
COMMD4-213ENST00000565834 DUX1O43812 170 aa17.93■□□□□ 0.46
COMMD4-213ENST00000565834 MYO1DO94832 1006 aa17.93■□□□□ 0.46
COMMD4-213ENST00000565834 SERPIND1P05546 499 aa17.93■□□□□ 0.46
COMMD4-213ENST00000565834 RETP07949 1114 aa17.93■□□□□ 0.46
COMMD4-213ENST00000565834 ZNF883P0CG24 379 aa17.93■□□□□ 0.46
COMMD4-213ENST00000565834 G6PDP11413 515 aa17.93■□□□□ 0.46
COMMD4-213ENST00000565834 ACPPP15309 386 aa17.93■□□□□ 0.46
COMMD4-213ENST00000565834 GPX3P22352 226 aa17.93■□□□□ 0.46
COMMD4-213ENST00000565834 PRDX6P30041 224 aa17.93■□□□□ 0.46
COMMD4-213ENST00000565834 NME5P56597 212 aa17.93■□□□□ 0.46
COMMD4-213ENST00000565834 GPLD1P80108 840 aa17.93■□□□□ 0.46
COMMD4-213ENST00000565834 TBL3Q12788 808 aaKnown RBP17.93■□□□□ 0.46
COMMD4-213ENST00000565834 CUL3Q13618 768 aa17.93■□□□□ 0.46
COMMD4-213ENST00000565834 SPRED3Q2MJR0 410 aa17.93■□□□□ 0.46
COMMD4-213ENST00000565834 PDCD4Q53EL6 469 aaKnown RBP17.93■□□□□ 0.46
COMMD4-213ENST00000565834 AGKQ53H12 422 aa17.93■□□□□ 0.46
COMMD4-213ENST00000565834 LACTB2Q53H82 288 aaPredicted RBP17.93■□□□□ 0.46
COMMD4-213ENST00000565834 NKAIN2Q5VXU1 208 aa17.93■□□□□ 0.46
COMMD4-213ENST00000565834 CYP20A1Q6UW02 462 aa17.93■□□□□ 0.46
COMMD4-213ENST00000565834 Q8N9G6 341 aaPredicted RBP17.93■□□□□ 0.46
COMMD4-213ENST00000565834 TRPV3Q8NET8 790 aa17.93■□□□□ 0.46
COMMD4-213ENST00000565834 CREB3L4Q8TEY5 395 aa17.93■□□□□ 0.46
COMMD4-213ENST00000565834 NCSTNQ92542 709 aa17.93■□□□□ 0.46
COMMD4-213ENST00000565834 CMTM5Q96DZ9 223 aa17.93■□□□□ 0.46
COMMD4-213ENST00000565834 PRRX2Q99811 253 aa17.93■□□□□ 0.46
COMMD4-213ENST00000565834 LRFN3Q9BTN0 628 aa17.93■□□□□ 0.46
COMMD4-213ENST00000565834 EPHA6Q9UF33 1036 aa17.93■□□□□ 0.46
COMMD4-213ENST00000565834 RUVBL1Q9Y265 456 aaKnown RBP17.93■□□□□ 0.46
COMMD4-213ENST00000565834 DMDP11532 3685 aa17.93■□□□□ 0.46
COMMD4-213ENST00000565834 LY6G6EA0A0G2JKS1 128 aa17.93■□□□□ 0.46
COMMD4-213ENST00000565834 LNP1A1A4G5 178 aa17.93■□□□□ 0.46
COMMD4-213ENST00000565834 CAPN5O15484 640 aaPredicted RBP17.93■□□□□ 0.46
COMMD4-213ENST00000565834 T-ENOLP0DO92 83 aa17.93■□□□□ 0.46
COMMD4-213ENST00000565834 ESRRAP11474 423 aaPredicted RBP17.93■□□□□ 0.46
COMMD4-213ENST00000565834 PNLIPP16233 465 aa17.93■□□□□ 0.46
COMMD4-213ENST00000565834 CALB2P22676 271 aa17.93■□□□□ 0.46
COMMD4-213ENST00000565834 ACADVLP49748 655 aa17.93■□□□□ 0.46
COMMD4-213ENST00000565834 RELAQ04206 551 aa17.93■□□□□ 0.46
COMMD4-213ENST00000565834 KHDRBS2Q5VWX1 349 aaKnown RBP17.93■□□□□ 0.46
COMMD4-213ENST00000565834 NOXRED1Q6NXP6 359 aa17.93■□□□□ 0.46
COMMD4-213ENST00000565834 PAOXQ6QHF9 649 aa17.93■□□□□ 0.46
COMMD4-213ENST00000565834 FAM92BQ6ZTR7 304 aa17.93■□□□□ 0.46
COMMD4-213ENST00000565834 LIX1Q8N485 282 aa17.93■□□□□ 0.46
COMMD4-213ENST00000565834 C1orf52Q8N6N3 182 aaKnown RBP17.93■□□□□ 0.46
COMMD4-213ENST00000565834 POU5F2Q8N7G0 328 aa17.93■□□□□ 0.46
COMMD4-213ENST00000565834 OR9I1Q8NGQ6 314 aa17.93■□□□□ 0.46
COMMD4-213ENST00000565834 CHTF18Q8WVB6 975 aa17.93■□□□□ 0.46
COMMD4-213ENST00000565834 ZDHHC12Q96GR4 267 aa17.93■□□□□ 0.46
COMMD4-213ENST00000565834 FCRL1Q96LA6 429 aa17.93■□□□□ 0.46
COMMD4-213ENST00000565834 TGM7Q96PF1 710 aa17.93■□□□□ 0.46
COMMD4-213ENST00000565834 CENPKQ9BS16 269 aa17.93■□□□□ 0.46
COMMD4-213ENST00000565834 C1GALT1Q9NS00 363 aa17.93■□□□□ 0.46
COMMD4-213ENST00000565834 CCDC167Q9P0B6 97 aa17.93■□□□□ 0.46
COMMD4-213ENST00000565834 DLGAP4Q9Y2H0 992 aa17.93■□□□□ 0.46
COMMD4-213ENST00000565834 U3KQA8 63 aa17.93■□□□□ 0.46
COMMD4-213ENST00000565834 CPED1A4D0V7 1026 aa17.92■□□□□ 0.46
COMMD4-213ENST00000565834 SAP18O00422 153 aaKnown RBP17.92■□□□□ 0.46
COMMD4-213ENST00000565834 B4GAT1O43505 415 aa17.92■□□□□ 0.46
COMMD4-213ENST00000565834 CTSVO60911 334 aa17.92■□□□□ 0.46
COMMD4-213ENST00000565834 ATP5HO75947 161 aa17.92■□□□□ 0.46
COMMD4-213ENST00000565834 SEMA3DO95025 777 aa17.92■□□□□ 0.46
COMMD4-213ENST00000565834 UNC5CO95185 931 aa17.92■□□□□ 0.46
COMMD4-213ENST00000565834 TBX6O95947 436 aaPredicted RBP17.92■□□□□ 0.46
COMMD4-213ENST00000565834 PRPS2P11908 318 aa17.92■□□□□ 0.46
COMMD4-213ENST00000565834 BCKDHAP12694 445 aa17.92■□□□□ 0.46
COMMD4-213ENST00000565834 COX4I1P13073 169 aa17.92■□□□□ 0.46
COMMD4-213ENST00000565834 ST6GAL1P15907 406 aa17.92■□□□□ 0.46
COMMD4-213ENST00000565834 GFERP55789 205 aa17.92■□□□□ 0.46
COMMD4-213ENST00000565834 SUZ12Q15022 739 aaKnown RBP17.92■□□□□ 0.46
COMMD4-213ENST00000565834 HERC3Q15034 1050 aa17.92■□□□□ 0.46
COMMD4-213ENST00000565834 MAPRE2Q15555 327 aa17.92■□□□□ 0.46
COMMD4-213ENST00000565834 AMZ1Q400G9 498 aa17.92■□□□□ 0.46
COMMD4-213ENST00000565834 DEPDC1Q5TB30 811 aa17.92■□□□□ 0.46
COMMD4-213ENST00000565834 FBXO42Q6P3S6 717 aa17.92■□□□□ 0.46
COMMD4-213ENST00000565834 GUSBP11Q6P575 273 aa17.92■□□□□ 0.46
COMMD4-213ENST00000565834 SPRED1Q7Z699 444 aa17.92■□□□□ 0.46
COMMD4-213ENST00000565834 C19orf47Q8N9M1 422 aaKnown RBP17.92■□□□□ 0.46
COMMD4-213ENST00000565834 SUMF1Q8NBK3 374 aa17.92■□□□□ 0.46
COMMD4-213ENST00000565834 THAP11Q96EK4 314 aa17.92■□□□□ 0.46
COMMD4-213ENST00000565834 TRAPPC9Q96Q05 1148 aa17.92■□□□□ 0.46
COMMD4-213ENST00000565834 F2RL3Q96RI0 385 aa17.92■□□□□ 0.46
COMMD4-213ENST00000565834 CD180Q99467 661 aa17.92■□□□□ 0.46
COMMD4-213ENST00000565834 MAP3K3Q99759 626 aa17.92■□□□□ 0.46
COMMD4-213ENST00000565834 ZFYVE21Q9BQ24 234 aa17.92■□□□□ 0.46
COMMD4-213ENST00000565834 AHSPQ9NZD4 102 aa17.92■□□□□ 0.46
COMMD4-213ENST00000565834 ZIM2Q9NZV7 527 aa17.92■□□□□ 0.46
COMMD4-213ENST00000565834 PILRAQ9UKJ1 303 aa17.92■□□□□ 0.46
COMMD4-213ENST00000565834 WDR87Q6ZQQ6 2873 aa17.92■□□□□ 0.46
COMMD4-213ENST00000565834 A0A0J9YVX5 310 aa17.91■□□□□ 0.46
COMMD4-213ENST00000565834 LOC100653049A0A140TA62 436 aa17.91■□□□□ 0.46
COMMD4-213ENST00000565834 TLCD2A6NGC4 264 aa17.91■□□□□ 0.46
COMMD4-213ENST00000565834 DLL1O00548 723 aa17.91■□□□□ 0.46
COMMD4-213ENST00000565834 NDUFS4O43181 175 aa17.91■□□□□ 0.46
COMMD4-213ENST00000565834 KRT34O76011 436 aa17.91■□□□□ 0.46
COMMD4-213ENST00000565834 THRAP10827 490 aa17.91■□□□□ 0.46
COMMD4-213ENST00000565834 RAP1GDS1P52306 607 aa17.91■□□□□ 0.46
COMMD4-213ENST00000565834 TCF15Q12870 199 aa17.91■□□□□ 0.46
COMMD4-213ENST00000565834 ZIC1Q15915 447 aa17.91■□□□□ 0.46
COMMD4-213ENST00000565834 INAVAQ3KP66 663 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms