RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 LRRC14BA6NHZ5 514 aa24.79■■□□□ 1.56
NME3-208ENST00000565379 IQCJ-SCHIP1C9J366 451 aaPredicted RBP24.79■■□□□ 1.56
NME3-208ENST00000565379 STMND1H3BQB6 276 aa24.79■■□□□ 1.56
NME3-208ENST00000565379 TXNDC9O14530 226 aa24.79■■□□□ 1.56
NME3-208ENST00000565379 POLR1CO15160 346 aaPredicted RBP24.79■■□□□ 1.56
NME3-208ENST00000565379 CTSVO60911 334 aa24.79■■□□□ 1.56
NME3-208ENST00000565379 WFS1O76024 890 aa24.79■■□□□ 1.56
NME3-208ENST00000565379 OTCP00480 354 aa24.79■■□□□ 1.56
NME3-208ENST00000565379 FGF5P12034 268 aa24.79■■□□□ 1.56
NME3-208ENST00000565379 EPORP19235 508 aa24.79■■□□□ 1.56
NME3-208ENST00000565379 ALDH3A1P30838 453 aa24.79■■□□□ 1.56
NME3-208ENST00000565379 SERPINB5P36952 375 aa24.79■■□□□ 1.56
NME3-208ENST00000565379 HNF4AP41235 474 aa24.79■■□□□ 1.56
NME3-208ENST00000565379 GABRA4P48169 554 aa24.79■■□□□ 1.56
NME3-208ENST00000565379 SERPINB4P48594 390 aa24.79■■□□□ 1.56
NME3-208ENST00000565379 CCNG1P51959 295 aa24.79■■□□□ 1.56
NME3-208ENST00000565379 NAGLUP54802 743 aa24.79■■□□□ 1.56
NME3-208ENST00000565379 SH3BP2P78314 561 aa24.79■■□□□ 1.56
NME3-208ENST00000565379 REEP5Q00765 189 aa24.79■■□□□ 1.56
NME3-208ENST00000565379 FOXM1Q08050 763 aa24.79■■□□□ 1.56
NME3-208ENST00000565379 HHATQ5VTY9 493 aa24.79■■□□□ 1.56
NME3-208ENST00000565379 CEACAM20Q6UY09 585 aa24.79■■□□□ 1.56
NME3-208ENST00000565379 PPP1R3BQ86XI6 285 aa24.79■■□□□ 1.56
NME3-208ENST00000565379 RERGQ96A58 199 aaPredicted RBP24.79■■□□□ 1.56
NME3-208ENST00000565379 ZNF501Q96CX3 271 aaPredicted RBP24.79■■□□□ 1.56
NME3-208ENST00000565379 SELENOSQ9BQE4 189 aa24.79■■□□□ 1.56
NME3-208ENST00000565379 TRMOQ9BU70 441 aa24.79■■□□□ 1.56
NME3-208ENST00000565379 NOL11Q9H8H0 719 aaKnown RBP24.79■■□□□ 1.56
NME3-208ENST00000565379 ACTR8Q9H981 624 aa24.79■■□□□ 1.56
NME3-208ENST00000565379 TLN1Q9Y490 2541 aaKnown RBP24.79■■□□□ 1.56
NME3-208ENST00000565379 HAT1O14929 419 aa24.78■■□□□ 1.56
NME3-208ENST00000565379 CD82P27701 267 aa24.78■■□□□ 1.56
NME3-208ENST00000565379 MPP2Q14168 576 aa24.78■■□□□ 1.56
NME3-208ENST00000565379 DOC2AQ14183 400 aa24.78■■□□□ 1.56
NME3-208ENST00000565379 KCNAB1Q14722 419 aa24.78■■□□□ 1.56
NME3-208ENST00000565379 LARP7Q4G0J3 582 aaKnown RBP eCLIP24.78■■□□□ 1.56
NME3-208ENST00000565379 DCAF12Q5T6F0 453 aa24.78■■□□□ 1.56
NME3-208ENST00000565379 GRHL2Q6ISB3 625 aa24.78■■□□□ 1.56
NME3-208ENST00000565379 NUDCD3Q8IVD9 361 aa24.78■■□□□ 1.56
NME3-208ENST00000565379 GPR135Q8IZ08 494 aa24.78■■□□□ 1.56
NME3-208ENST00000565379 CCNYL1Q8N7R7 359 aa24.78■■□□□ 1.56
NME3-208ENST00000565379 ANKRD42Q8N9B4 389 aa24.78■■□□□ 1.56
NME3-208ENST00000565379 CNDP1Q96KN2 507 aa24.78■■□□□ 1.56
NME3-208ENST00000565379 OR2A5Q96R48 311 aa24.78■■□□□ 1.56
NME3-208ENST00000565379 DRC3Q9H069 523 aa24.78■■□□□ 1.56
NME3-208ENST00000565379 GEMIN8Q9NWZ8 242 aaKnown RBP24.78■■□□□ 1.56
NME3-208ENST00000565379 A0A0J9YVX5 310 aa24.77■■□□□ 1.56
NME3-208ENST00000565379 TMEM150CB9EJG8 249 aa24.77■■□□□ 1.56
NME3-208ENST00000565379 CLDN9O95484 217 aa24.77■■□□□ 1.56
NME3-208ENST00000565379 AHRP35869 848 aa24.77■■□□□ 1.56
NME3-208ENST00000565379 ITGA1P56199 1179 aa24.77■■□□□ 1.56
NME3-208ENST00000565379 LCP2Q13094 533 aa24.77■■□□□ 1.56
NME3-208ENST00000565379 SLBPQ14493 270 aaKnown RBP eCLIP24.77■■□□□ 1.56
NME3-208ENST00000565379 LINC00303Q3SY05 128 aa24.77■■□□□ 1.56
NME3-208ENST00000565379 TLDC1Q6P9B6 456 aa24.77■■□□□ 1.56
NME3-208ENST00000565379 ZNF655Q8N720 491 aaPredicted RBP24.77■■□□□ 1.56
NME3-208ENST00000565379 EXD3Q8N9H8 876 aa24.77■■□□□ 1.56
NME3-208ENST00000565379 L3MBTL4Q8NA19 623 aa24.77■■□□□ 1.56
NME3-208ENST00000565379 MFSD9Q8NBP5 474 aa24.77■■□□□ 1.56
NME3-208ENST00000565379 EXTL1Q92935 676 aa24.77■■□□□ 1.56
NME3-208ENST00000565379 ZNF285Q96NJ3 590 aa24.77■■□□□ 1.56
NME3-208ENST00000565379 NSUN5Q96P11 429 aaKnown RBP24.77■■□□□ 1.56
NME3-208ENST00000565379 ZBTB26Q9HCK0 441 aa24.77■■□□□ 1.56
NME3-208ENST00000565379 SEMA4BQ9NPR2 832 aaPredicted RBP24.77■■□□□ 1.56
NME3-208ENST00000565379 OR7A17O14581 309 aa24.76■■□□□ 1.55
NME3-208ENST00000565379 NPHS1O60500 1241 aa24.76■■□□□ 1.55
NME3-208ENST00000565379 RAD1O60671 282 aa24.76■■□□□ 1.55
NME3-208ENST00000565379 LIFP15018 202 aa24.76■■□□□ 1.55
NME3-208ENST00000565379 VARSP26640 1264 aaKnown RBP24.76■■□□□ 1.55
NME3-208ENST00000565379 SERPINB1P30740 379 aa24.76■■□□□ 1.55
NME3-208ENST00000565379 HPDP32754 393 aaPredicted RBP24.76■■□□□ 1.55
NME3-208ENST00000565379 SCTRP47872 440 aa24.76■■□□□ 1.55
NME3-208ENST00000565379 PKNOX1P55347 436 aa24.76■■□□□ 1.55
NME3-208ENST00000565379 GPR19Q15760 415 aa24.76■■□□□ 1.55
NME3-208ENST00000565379 RBBP7Q16576 425 aa24.76■■□□□ 1.55
NME3-208ENST00000565379 GGTA1PQ4G0N0 100 aa24.76■■□□□ 1.55
NME3-208ENST00000565379 C10orf62Q5T681 223 aaPredicted RBP24.76■■□□□ 1.55
NME3-208ENST00000565379 TMIGD1Q6UXZ0 262 aa24.76■■□□□ 1.55
NME3-208ENST00000565379 FRMD7Q6ZUT3 714 aa24.76■■□□□ 1.55
NME3-208ENST00000565379 TIPARPQ7Z3E1 657 aaKnown RBP24.76■■□□□ 1.55
NME3-208ENST00000565379 MILR1Q7Z6M3 343 aa24.76■■□□□ 1.55
NME3-208ENST00000565379 TRPC4APQ8TEL6 797 aa24.76■■□□□ 1.55
NME3-208ENST00000565379 REPS1Q96D71 796 aa24.76■■□□□ 1.55
NME3-208ENST00000565379 ZNF382Q96SR6 550 aa24.76■■□□□ 1.55
NME3-208ENST00000565379 NLNQ9BYT8 704 aa24.76■■□□□ 1.55
NME3-208ENST00000565379 SPRY4Q9C004 299 aa24.76■■□□□ 1.55
NME3-208ENST00000565379 GSTO2Q9H4Y5 243 aa24.76■■□□□ 1.55
NME3-208ENST00000565379 ADGRE2Q9UHX3 823 aa24.76■■□□□ 1.55
NME3-208ENST00000565379 AP1M2Q9Y6Q5 423 aa24.76■■□□□ 1.55
NME3-208ENST00000565379 SPTA1P02549 2419 aa24.76■■□□□ 1.55
NME3-208ENST00000565379 OR1F1O43749 312 aa24.75■■□□□ 1.55
NME3-208ENST00000565379 SNRNP200O75643 2136 aaKnown RBP24.75■■□□□ 1.55
NME3-208ENST00000565379 SNUPNO95149 360 aaKnown RBP24.75■■□□□ 1.55
NME3-208ENST00000565379 ARL1P40616 181 aaPredicted RBP24.75■■□□□ 1.55
NME3-208ENST00000565379 CDH13P55290 713 aa24.75■■□□□ 1.55
NME3-208ENST00000565379 PPP2R2AP63151 447 aa24.75■■□□□ 1.55
NME3-208ENST00000565379 YOD1Q5VVQ6 348 aaPredicted RBP24.75■■□□□ 1.55
NME3-208ENST00000565379 TRPV3Q8NET8 790 aa24.75■■□□□ 1.55
NME3-208ENST00000565379 PPP1R14CQ8TAE6 165 aa24.75■■□□□ 1.55
NME3-208ENST00000565379 MECRQ9BV79 373 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms