RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 TICAM1Q8IUC6 712 aa12.22□□□□□ -0.45
COMMD4-209ENST00000564068 SLC22A15Q8IZD6 547 aa12.22□□□□□ -0.45
COMMD4-209ENST00000564068 PAAF1Q9BRP4 392 aa12.22□□□□□ -0.45
COMMD4-209ENST00000564068 GSDMCQ9BYG8 508 aa12.22□□□□□ -0.45
COMMD4-209ENST00000564068 CD244Q9BZW8 370 aa12.22□□□□□ -0.45
COMMD4-209ENST00000564068 POPDC3Q9HBV1 291 aa12.22□□□□□ -0.45
COMMD4-209ENST00000564068 THG1LQ9NWX6 298 aaKnown RBP12.22□□□□□ -0.45
COMMD4-209ENST00000564068 ZNF282Q9UDV7 671 aaPredicted RBP12.22□□□□□ -0.45
COMMD4-209ENST00000564068 MAN2B2Q9Y2E5 1009 aa12.22□□□□□ -0.45
COMMD4-209ENST00000564068 NUP205Q92621 2012 aa12.22□□□□□ -0.45
COMMD4-209ENST00000564068 CH25HO95992 272 aa12.22□□□□□ -0.45
COMMD4-209ENST00000564068 CDH4P55283 916 aa12.22□□□□□ -0.45
COMMD4-209ENST00000564068 MAD2L1BPQ15013 274 aaPredicted RBP12.22□□□□□ -0.45
COMMD4-209ENST00000564068 SPHARQ15513 63 aa12.22□□□□□ -0.45
COMMD4-209ENST00000564068 KCNA10Q16322 511 aa12.22□□□□□ -0.45
COMMD4-209ENST00000564068 ZNF613Q6PF04 617 aa12.22□□□□□ -0.45
COMMD4-209ENST00000564068 SHQ1Q6PI26 577 aaKnown RBP12.22□□□□□ -0.45
COMMD4-209ENST00000564068 SLC5A8Q8N695 610 aa12.22□□□□□ -0.45
COMMD4-209ENST00000564068 SNAPC3Q92966 411 aa12.22□□□□□ -0.45
COMMD4-209ENST00000564068 UBE2FQ969M7 185 aa12.22□□□□□ -0.45
COMMD4-209ENST00000564068 IGSF8Q969P0 613 aa12.22□□□□□ -0.45
COMMD4-209ENST00000564068 GRIP1Q9Y3R0 1128 aa12.22□□□□□ -0.45
COMMD4-209ENST00000564068 A0A1B0GVM2 712 aa12.21□□□□□ -0.45
COMMD4-209ENST00000564068 UBE2QL1A1L167 161 aa12.21□□□□□ -0.45
COMMD4-209ENST00000564068 CLCA1A8K7I4 914 aa12.21□□□□□ -0.45
COMMD4-209ENST00000564068 PLD2O14939 933 aa12.21□□□□□ -0.45
COMMD4-209ENST00000564068 PCDH7O60245 1069 aa12.21□□□□□ -0.45
COMMD4-209ENST00000564068 TOXO94900 526 aa12.21□□□□□ -0.45
COMMD4-209ENST00000564068 OR1D2P34982 312 aa12.21□□□□□ -0.45
COMMD4-209ENST00000564068 ZNF81P51508 661 aa12.21□□□□□ -0.45
COMMD4-209ENST00000564068 ZXDBP98169 803 aa12.21□□□□□ -0.45
COMMD4-209ENST00000564068 MTAPQ13126 283 aa12.21□□□□□ -0.45
COMMD4-209ENST00000564068 PPIGQ13427 754 aaKnown RBP eCLIP12.21□□□□□ -0.451e-6■■■■□ 25.8
COMMD4-209ENST00000564068 SERINC3Q13530 473 aa12.21□□□□□ -0.45
COMMD4-209ENST00000564068 ZNF691Q5VV52 312 aa12.21□□□□□ -0.45
COMMD4-209ENST00000564068 PM20D1Q6GTS8 502 aa12.21□□□□□ -0.45
COMMD4-209ENST00000564068 MFSD6LQ8IWD5 586 aa12.21□□□□□ -0.45
COMMD4-209ENST00000564068 TMEM151AQ8N4L1 468 aa12.21□□□□□ -0.45
COMMD4-209ENST00000564068 OR52L1Q8NGH7 329 aa12.21□□□□□ -0.45
COMMD4-209ENST00000564068 UBXN10Q96LJ8 280 aa12.21□□□□□ -0.45
COMMD4-209ENST00000564068 STARD7Q9NQZ5 370 aa12.21□□□□□ -0.45
COMMD4-209ENST00000564068 DCAF13Q9NV06 445 aaKnown RBP12.21□□□□□ -0.45
COMMD4-209ENST00000564068 NLE1Q9NVX2 485 aaPredicted RBP12.21□□□□□ -0.45
COMMD4-209ENST00000564068 SEC14L4Q9UDX3 406 aa12.21□□□□□ -0.45
COMMD4-209ENST00000564068 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.21□□□□□ -0.45
COMMD4-209ENST00000564068 WNT9AO14904 365 aa12.21□□□□□ -0.45
COMMD4-209ENST00000564068 CLDN7O95471 211 aa12.21□□□□□ -0.45
COMMD4-209ENST00000564068 EPOP01588 193 aa12.21□□□□□ -0.45
COMMD4-209ENST00000564068 NSG1P42857 185 aa12.21□□□□□ -0.45
COMMD4-209ENST00000564068 MAGEA12P43365 314 aa12.21□□□□□ -0.45
COMMD4-209ENST00000564068 MAP2K3P46734 347 aa12.21□□□□□ -0.45
COMMD4-209ENST00000564068 SMARCD3Q6STE5 483 aa12.21□□□□□ -0.45
COMMD4-209ENST00000564068 CNTN4Q8IWV2 1026 aa12.21□□□□□ -0.45
COMMD4-209ENST00000564068 PCSK9Q8NBP7 692 aaKnown RBP12.21□□□□□ -0.45
COMMD4-209ENST00000564068 DEDD2Q8WXF8 326 aa12.21□□□□□ -0.45
COMMD4-209ENST00000564068 RACGAP1Q9H0H5 632 aa12.21□□□□□ -0.45
COMMD4-209ENST00000564068 PFDN2Q9UHV9 154 aa12.21□□□□□ -0.45
COMMD4-209ENST00000564068 DHRS7Q9Y394 339 aa12.21□□□□□ -0.45
COMMD4-209ENST00000564068 H3BM21 787 aa12.21□□□□□ -0.46
COMMD4-209ENST00000564068 MID1O15344 667 aa12.21□□□□□ -0.46
COMMD4-209ENST00000564068 SULT1C4O75897 302 aa12.21□□□□□ -0.46
COMMD4-209ENST00000564068 PDYNP01213 254 aa12.21□□□□□ -0.46
COMMD4-209ENST00000564068 UQCRC1P31930 480 aa12.21□□□□□ -0.46
COMMD4-209ENST00000564068 EPHB3P54753 998 aa12.21□□□□□ -0.46
COMMD4-209ENST00000564068 GHRHRQ02643 423 aa12.21□□□□□ -0.46
COMMD4-209ENST00000564068 HSF2Q03933 536 aa12.21□□□□□ -0.46
COMMD4-209ENST00000564068 EXOC3L2Q2M3D2 409 aa12.21□□□□□ -0.46
COMMD4-209ENST00000564068 NOXRED1Q6NXP6 359 aa12.21□□□□□ -0.46
COMMD4-209ENST00000564068 CLECL1Q8IZS7 167 aa12.21□□□□□ -0.46
COMMD4-209ENST00000564068 Q8N402 240 aa12.21□□□□□ -0.46
COMMD4-209ENST00000564068 ISL2Q96A47 359 aa12.21□□□□□ -0.46
COMMD4-209ENST00000564068 GPR78Q96P69 363 aa12.21□□□□□ -0.46
COMMD4-209ENST00000564068 ATOH8Q96SQ7 321 aa12.21□□□□□ -0.46
COMMD4-209ENST00000564068 HECAQ9UBI9 543 aaPredicted RBP12.21□□□□□ -0.46
COMMD4-209ENST00000564068 ENTPD4Q9Y227 616 aa12.21□□□□□ -0.46
COMMD4-209ENST00000564068 ASF1AQ9Y294 204 aa12.21□□□□□ -0.46
COMMD4-209ENST00000564068 NCKAP1Q9Y2A7 1128 aa12.21□□□□□ -0.46
COMMD4-209ENST00000564068 ACTL7AQ9Y615 435 aa12.21□□□□□ -0.46
COMMD4-209ENST00000564068 KNL1Q8NG31 2342 aa12.21□□□□□ -0.46
COMMD4-209ENST00000564068 A0A1W2PRB8 838 aa12.2□□□□□ -0.46
COMMD4-209ENST00000564068 MEIOCA2RUB1 952 aa12.2□□□□□ -0.46
COMMD4-209ENST00000564068 CAPNS1P04632 268 aa12.2□□□□□ -0.46
COMMD4-209ENST00000564068 TCF3P15923 654 aa12.2□□□□□ -0.46
COMMD4-209ENST00000564068 NTSP30990 170 aa12.2□□□□□ -0.46
COMMD4-209ENST00000564068 SLC6A4P31645 630 aa12.2□□□□□ -0.46
COMMD4-209ENST00000564068 STARP49675 285 aa12.2□□□□□ -0.46
COMMD4-209ENST00000564068 FAM110CQ1W6H9 321 aa12.2□□□□□ -0.46
COMMD4-209ENST00000564068 ZNF697Q5TEC3 545 aa12.2□□□□□ -0.46
COMMD4-209ENST00000564068 CAPN13Q6MZZ7 669 aaPredicted RBP12.2□□□□□ -0.46
COMMD4-209ENST00000564068 UROC1Q96N76 676 aa12.2□□□□□ -0.46
COMMD4-209ENST00000564068 ZNF583Q96ND8 569 aa12.2□□□□□ -0.46
COMMD4-209ENST00000564068 DEFB118Q96PH6 123 aa12.2□□□□□ -0.46
COMMD4-209ENST00000564068 BCL7BQ9BQE9 202 aa12.2□□□□□ -0.46
COMMD4-209ENST00000564068 SPATA5L1Q9BVQ7 753 aa12.2□□□□□ -0.46
COMMD4-209ENST00000564068 ANKRD34BA5PLL1 514 aa12.2□□□□□ -0.46
COMMD4-209ENST00000564068 PQBP1O60828 265 aaKnown RBP12.2□□□□□ -0.46
COMMD4-209ENST00000564068 KDM4BO94953 1096 aa12.2□□□□□ -0.46
COMMD4-209ENST00000564068 LRG1P02750 347 aa12.2□□□□□ -0.46
COMMD4-209ENST00000564068 ERP29P30040 261 aaKnown RBP12.2□□□□□ -0.46
COMMD4-209ENST00000564068 TGFBR1P36897 503 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms