RNA–Protein interactions for RNA: ENST00000563901.5

SH3GL3-205, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-205ENST00000563901 CSTF2P33240 577 aaKnown RBP eCLIP25.79■■□□□ 1.72
SH3GL3-205ENST00000563901 LSP1P33241 339 aa25.79■■□□□ 1.72
SH3GL3-205ENST00000563901 SNRPNP63162 240 aaKnown RBP25.79■■□□□ 1.72
SH3GL3-205ENST00000563901 RELAQ04206 551 aa25.79■■□□□ 1.72
SH3GL3-205ENST00000563901 HKDC1Q2TB90 917 aa25.79■■□□□ 1.72
SH3GL3-205ENST00000563901 ZC3H12BQ5HYM0 836 aaKnown RBP25.79■■□□□ 1.72
SH3GL3-205ENST00000563901 TBC1D19Q8N5T2 526 aa25.79■■□□□ 1.72
SH3GL3-205ENST00000563901 CREB3L4Q8TEY5 395 aa25.79■■□□□ 1.72
SH3GL3-205ENST00000563901 ZNF473Q8WTR7 871 aaKnown RBP25.79■■□□□ 1.72
SH3GL3-205ENST00000563901 UBE2E3Q969T4 207 aa25.79■■□□□ 1.72
SH3GL3-205ENST00000563901 DEPDC7Q96QD5 511 aa25.79■■□□□ 1.72
SH3GL3-205ENST00000563901 PITHD1Q9GZP4 211 aaPredicted RBP25.79■■□□□ 1.72
SH3GL3-205ENST00000563901 RHBGQ9H310 441 aa25.79■■□□□ 1.72
SH3GL3-205ENST00000563901 PLCL2Q9UPR0 1127 aa25.79■■□□□ 1.72
SH3GL3-205ENST00000563901 AP1M2Q9Y6Q5 423 aa25.79■■□□□ 1.72
SH3GL3-205ENST00000563901 ANKDD1BA6NHY2 528 aa25.78■■□□□ 1.72
SH3GL3-205ENST00000563901 EFCAB7A8K855 629 aa25.78■■□□□ 1.72
SH3GL3-205ENST00000563901 HGSO14964 777 aaPredicted RBP25.78■■□□□ 1.72
SH3GL3-205ENST00000563901 NDUFS4O43181 175 aa25.78■■□□□ 1.72
SH3GL3-205ENST00000563901 SNUPNO95149 360 aaKnown RBP25.78■■□□□ 1.72
SH3GL3-205ENST00000563901 KRT6AP02538 564 aa25.78■■□□□ 1.72
SH3GL3-205ENST00000563901 KRT6BP04259 564 aa25.78■■□□□ 1.72
SH3GL3-205ENST00000563901 CDK4P11802 303 aa25.78■■□□□ 1.72
SH3GL3-205ENST00000563901 CCL4P13236 92 aa25.78■■□□□ 1.72
SH3GL3-205ENST00000563901 KRT6CP48668 564 aa25.78■■□□□ 1.72
SH3GL3-205ENST00000563901 SEC24CP53992 1094 aa25.78■■□□□ 1.72
SH3GL3-205ENST00000563901 RPS13P62277 151 aaKnown RBP25.78■■□□□ 1.72
SH3GL3-205ENST00000563901 SF3A3Q12874 501 aaKnown RBP eCLIP25.78■■□□□ 1.72
SH3GL3-205ENST00000563901 TMTC4Q5T4D3 741 aa25.78■■□□□ 1.72
SH3GL3-205ENST00000563901 USP7Q93009 1102 aa25.78■■□□□ 1.72
SH3GL3-205ENST00000563901 OR6C1Q96RD1 312 aa25.78■■□□□ 1.72
SH3GL3-205ENST00000563901 AICDAQ9GZX7 198 aa25.78■■□□□ 1.72
SH3GL3-205ENST00000563901 DMRT3Q9NQL9 472 aa25.78■■□□□ 1.72
SH3GL3-205ENST00000563901 PIP5K1BO14986 540 aa25.77■■□□□ 1.72
SH3GL3-205ENST00000563901 ULK1O75385 1050 aa25.77■■□□□ 1.72
SH3GL3-205ENST00000563901 ETHE1O95571 254 aa25.77■■□□□ 1.72
SH3GL3-205ENST00000563901 TGFB1P01137 390 aa25.77■■□□□ 1.72
SH3GL3-205ENST00000563901 LINC00032P0C843 101 aa25.77■■□□□ 1.72
SH3GL3-205ENST00000563901 AHRP35869 848 aa25.77■■□□□ 1.72
SH3GL3-205ENST00000563901 FOXM1Q08050 763 aa25.77■■□□□ 1.72
SH3GL3-205ENST00000563901 TUBB3Q13509 450 aa25.77■■□□□ 1.72
SH3GL3-205ENST00000563901 ASPGQ86U10 573 aa25.77■■□□□ 1.72
SH3GL3-205ENST00000563901 AGBL5Q8NDL9 886 aa25.77■■□□□ 1.72
SH3GL3-205ENST00000563901 OR1L3Q8NH93 324 aa25.77■■□□□ 1.72
SH3GL3-205ENST00000563901 PIWIL2Q8TC59 973 aaKnown RBP25.77■■□□□ 1.72
SH3GL3-205ENST00000563901 RERGQ96A58 199 aaPredicted RBP25.77■■□□□ 1.72
SH3GL3-205ENST00000563901 REPS1Q96D71 796 aa25.77■■□□□ 1.72
SH3GL3-205ENST00000563901 SPRTNQ9H040 489 aaPredicted RBP25.77■■□□□ 1.72
SH3GL3-205ENST00000563901 APMAPQ9HDC9 416 aa25.77■■□□□ 1.72
SH3GL3-205ENST00000563901 FGF21Q9NSA1 209 aa25.77■■□□□ 1.72
SH3GL3-205ENST00000563901 ADAM21Q9UKJ8 722 aa25.77■■□□□ 1.72
SH3GL3-205ENST00000563901 SCN3AQ9NY46 2000 aa25.77■■□□□ 1.72
SH3GL3-205ENST00000563901 A0A1W2PNU3 283 aaPredicted RBP25.77■■□□□ 1.72
SH3GL3-205ENST00000563901 BTKQ06187 659 aa25.77■■□□□ 1.72
SH3GL3-205ENST00000563901 HYAL2Q12891 473 aa25.77■■□□□ 1.72
SH3GL3-205ENST00000563901 WASHC2DQ5SRD0 308 aa25.77■■□□□ 1.72
SH3GL3-205ENST00000563901 PRAMEF17Q5VTA0 474 aa25.77■■□□□ 1.72
SH3GL3-205ENST00000563901 MAVSQ7Z434 540 aa25.77■■□□□ 1.72
SH3GL3-205ENST00000563901 DDIASQ8IXT1 998 aa25.77■■□□□ 1.72
SH3GL3-205ENST00000563901 KCT2Q8NC54 265 aa25.77■■□□□ 1.72
SH3GL3-205ENST00000563901 SLC13A3Q8WWT9 602 aa25.77■■□□□ 1.72
SH3GL3-205ENST00000563901 N4BP2L2Q92802 583 aaPredicted RBP25.77■■□□□ 1.72
SH3GL3-205ENST00000563901 ZNF501Q96CX3 271 aaPredicted RBP25.77■■□□□ 1.72
SH3GL3-205ENST00000563901 TM4SF19Q96DZ7 209 aa25.77■■□□□ 1.72
SH3GL3-205ENST00000563901 NUF2Q9BZD4 464 aa25.77■■□□□ 1.72
SH3GL3-205ENST00000563901 KLHL31Q9H511 634 aa25.77■■□□□ 1.72
SH3GL3-205ENST00000563901 SAP18O00422 153 aaKnown RBP25.76■■□□□ 1.71
SH3GL3-205ENST00000563901 ITIH1P19827 911 aa25.76■■□□□ 1.71
SH3GL3-205ENST00000563901 HNRNPH1P31943 449 aaKnown RBP25.76■■□□□ 1.71
SH3GL3-205ENST00000563901 HMGCS1Q01581 520 aa25.76■■□□□ 1.71
SH3GL3-205ENST00000563901 TARDBPQ13148 414 aaKnown RBP eCLIP25.76■■□□□ 1.713e-7■■■■□ 23.8
SH3GL3-205ENST00000563901 VWA5B1Q5TIE3 1220 aa25.76■■□□□ 1.71
SH3GL3-205ENST00000563901 CGB2Q6NT52 195 aa25.76■■□□□ 1.71
SH3GL3-205ENST00000563901 WDR75Q8IWA0 830 aaKnown RBP25.76■■□□□ 1.71
SH3GL3-205ENST00000563901 CSNK1A1LQ8N752 337 aa25.76■■□□□ 1.71
SH3GL3-205ENST00000563901 BMPERQ8N8U9 685 aa25.76■■□□□ 1.71
SH3GL3-205ENST00000563901 OR2T11Q8NH01 316 aa25.76■■□□□ 1.71
SH3GL3-205ENST00000563901 PMEPA1Q969W9 287 aa25.76■■□□□ 1.71
SH3GL3-205ENST00000563901 C3orf30Q96M34 536 aa25.76■■□□□ 1.71
SH3GL3-205ENST00000563901 CTRCQ99895 268 aa25.76■■□□□ 1.71
SH3GL3-205ENST00000563901 STRADBQ9C0K7 418 aa25.76■■□□□ 1.71
SH3GL3-205ENST00000563901 OR51B5Q9H339 312 aa25.76■■□□□ 1.71
SH3GL3-205ENST00000563901 IRAK4Q9NWZ3 460 aa25.76■■□□□ 1.71
SH3GL3-205ENST00000563901 LOXL2Q9Y4K0 774 aa25.76■■□□□ 1.71
SH3GL3-205ENST00000563901 SDHBP21912 280 aa25.75■■□□□ 1.71
SH3GL3-205ENST00000563901 ADAMTS14Q8WXS8 1223 aa25.75■■□□□ 1.71
SH3GL3-205ENST00000563901 THAP11Q96EK4 314 aa25.75■■□□□ 1.71
SH3GL3-205ENST00000563901 MS4A8Q9BY19 250 aa25.75■■□□□ 1.71
SH3GL3-205ENST00000563901 ACPTQ9BZG2 426 aa25.75■■□□□ 1.71
SH3GL3-205ENST00000563901 RABEP2Q9H5N1 569 aa25.75■■□□□ 1.71
SH3GL3-205ENST00000563901 GIMAP2Q9UG22 337 aa25.75■■□□□ 1.71
SH3GL3-205ENST00000563901 RUVBL1Q9Y265 456 aaKnown RBP25.75■■□□□ 1.71
SH3GL3-205ENST00000563901 MRPS2Q9Y399 296 aaKnown RBP25.75■■□□□ 1.71
SH3GL3-205ENST00000563901 TSC22D4Q9Y3Q8 395 aa25.75■■□□□ 1.71
SH3GL3-205ENST00000563901 C4orf51C9J302 202 aa25.74■■□□□ 1.71
SH3GL3-205ENST00000563901 H3BMH7 237 aa25.74■■□□□ 1.71
SH3GL3-205ENST00000563901 CLEC3AO75596 197 aa25.74■■□□□ 1.71
SH3GL3-205ENST00000563901 CHEK2O96017 543 aa25.74■■□□□ 1.71
SH3GL3-205ENST00000563901 ETV5P41161 510 aa25.74■■□□□ 1.71
SH3GL3-205ENST00000563901 PIK3CBP42338 1070 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms