RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 ZNF490Q9ULM2 529 aaPredicted RBP8.13□□□□□ -1.11
UBR1-204ENST00000563239 DYRK1BQ9Y463 629 aa8.13□□□□□ -1.11
UBR1-204ENST00000563239 KCNE2Q9Y6J6 123 aa8.13□□□□□ -1.11
UBR1-204ENST00000563239 MAU2Q9Y6X3 613 aa8.13□□□□□ -1.11
UBR1-204ENST00000563239 MDC1Q14676 2089 aaKnown RBP8.13□□□□□ -1.11
UBR1-204ENST00000563239 A0A1W2PPM1 405 aa8.12□□□□□ -1.11
UBR1-204ENST00000563239 CDC14CA4D256 554 aa8.12□□□□□ -1.11
UBR1-204ENST00000563239 TXNDC9O14530 226 aa8.12□□□□□ -1.11
UBR1-204ENST00000563239 OR1F1O43749 312 aa8.12□□□□□ -1.11
UBR1-204ENST00000563239 DNAJB6O75190 326 aa8.12□□□□□ -1.11
UBR1-204ENST00000563239 ALBP02768 609 aa8.12□□□□□ -1.11
UBR1-204ENST00000563239 ITGB2P05107 769 aa8.12□□□□□ -1.11
UBR1-204ENST00000563239 C1GALT1C1LP0DN25 315 aa8.12□□□□□ -1.11
UBR1-204ENST00000563239 GNAZP19086 355 aa8.12□□□□□ -1.11
UBR1-204ENST00000563239 AHRP35869 848 aa8.12□□□□□ -1.11
UBR1-204ENST00000563239 CASP2P42575 452 aa8.12□□□□□ -1.11
UBR1-204ENST00000563239 EFNA3P52797 238 aa8.12□□□□□ -1.11
UBR1-204ENST00000563239 ALDH18A1P54886 795 aaKnown RBP8.12□□□□□ -1.11
UBR1-204ENST00000563239 MC1RQ01726 317 aa8.12□□□□□ -1.11
UBR1-204ENST00000563239 FAM53BQ14153 422 aa8.12□□□□□ -1.11
UBR1-204ENST00000563239 DOC2AQ14183 400 aa8.12□□□□□ -1.11
UBR1-204ENST00000563239 SLBPQ14493 270 aaKnown RBP eCLIP8.12□□□□□ -1.11
UBR1-204ENST00000563239 SETDB1Q15047 1291 aa8.12□□□□□ -1.11
UBR1-204ENST00000563239 RASA2Q15283 850 aa8.12□□□□□ -1.11
UBR1-204ENST00000563239 NKG7Q16617 165 aa8.12□□□□□ -1.11
UBR1-204ENST00000563239 PDK4Q16654 411 aa8.12□□□□□ -1.11
UBR1-204ENST00000563239 PFKFB4Q16877 469 aa8.12□□□□□ -1.11
UBR1-204ENST00000563239 MUM1Q2TAK8 710 aa8.12□□□□□ -1.11
UBR1-204ENST00000563239 DEFB109BQ30KR1 87 aa8.12□□□□□ -1.11
UBR1-204ENST00000563239 GARNL3Q5VVW2 1013 aa8.12□□□□□ -1.11
UBR1-204ENST00000563239 ADNP2Q6IQ32 1131 aa8.12□□□□□ -1.11
UBR1-204ENST00000563239 LRRC70Q7Z2Q7 622 aa8.12□□□□□ -1.11
UBR1-204ENST00000563239 VN1R5Q7Z5H4 357 aa8.12□□□□□ -1.11
UBR1-204ENST00000563239 ASPGQ86U10 573 aa8.12□□□□□ -1.11
UBR1-204ENST00000563239 PDSS2Q86YH6 399 aa8.12□□□□□ -1.11
UBR1-204ENST00000563239 TDRPQ86YL5 185 aa8.12□□□□□ -1.11
UBR1-204ENST00000563239 AFAP1L2Q8N4X5 818 aa8.12□□□□□ -1.11
UBR1-204ENST00000563239 OR2Y1Q8NGV0 311 aa8.12□□□□□ -1.11
UBR1-204ENST00000563239 OR2W6PQ8NHA6 318 aa8.12□□□□□ -1.11
UBR1-204ENST00000563239 NT5CQ8TCD5 201 aa8.12□□□□□ -1.11
UBR1-204ENST00000563239 EPS8L3Q8TE67 593 aaKnown RBP8.12□□□□□ -1.11
UBR1-204ENST00000563239 SLC13A3Q8WWT9 602 aa8.12□□□□□ -1.11
UBR1-204ENST00000563239 CAVIN3Q969G5 261 aa8.12□□□□□ -1.11
UBR1-204ENST00000563239 FKBP10Q96AY3 582 aa8.12□□□□□ -1.11
UBR1-204ENST00000563239 MTBPQ96DY7 904 aa8.12□□□□□ -1.11
UBR1-204ENST00000563239 CABS1Q96KC9 395 aa8.12□□□□□ -1.11
UBR1-204ENST00000563239 SPSB2Q99619 263 aa8.12□□□□□ -1.11
UBR1-204ENST00000563239 EHD1Q9H4M9 534 aa8.12□□□□□ -1.11
UBR1-204ENST00000563239 CNOT10Q9H9A5 744 aaKnown RBP8.12□□□□□ -1.11
UBR1-204ENST00000563239 ZNF304Q9HCX3 659 aa8.12□□□□□ -1.11
UBR1-204ENST00000563239 TMEM216Q9P0N5 145 aa8.12□□□□□ -1.11
UBR1-204ENST00000563239 IFT80Q9P2H3 777 aaPredicted RBP8.12□□□□□ -1.11
UBR1-204ENST00000563239 XPR1Q9UBH6 696 aa8.12□□□□□ -1.11
UBR1-204ENST00000563239 TBK1Q9UHD2 729 aa8.12□□□□□ -1.11
UBR1-204ENST00000563239 ZFP69BQ9UJL9 534 aa8.12□□□□□ -1.11
UBR1-204ENST00000563239 BSNQ9UPA5 3926 aa8.11□□□□□ -1.11
UBR1-204ENST00000563239 IGLV3-12A0A075B6K2 115 aa8.11□□□□□ -1.11
UBR1-204ENST00000563239 A0A0A6YYC8 382 aaPredicted RBP8.11□□□□□ -1.11
UBR1-204ENST00000563239 IQANK1A0A1B0GTG1 560 aa8.11□□□□□ -1.11
UBR1-204ENST00000563239 SYCE1LA8MT33 242 aa8.11□□□□□ -1.11
UBR1-204ENST00000563239 C4orf51C9J302 202 aa8.11□□□□□ -1.11
UBR1-204ENST00000563239 C9J4A7 227 aa8.11□□□□□ -1.11
UBR1-204ENST00000563239 I3L1I5 382 aaPredicted RBP8.11□□□□□ -1.11
UBR1-204ENST00000563239 GOLGA8RI6L899 631 aa8.11□□□□□ -1.11
UBR1-204ENST00000563239 K7EPI3 171 aa8.11□□□□□ -1.11
UBR1-204ENST00000563239 ERVH48-1M5A8F1 160 aa8.11□□□□□ -1.11
UBR1-204ENST00000563239 TK2O00142 265 aa8.11□□□□□ -1.11
UBR1-204ENST00000563239 E2F3O00716 465 aa8.11□□□□□ -1.11
UBR1-204ENST00000563239 FFAR3O14843 346 aa8.11□□□□□ -1.11
UBR1-204ENST00000563239 ATXN7O15265 892 aaPredicted RBP8.11□□□□□ -1.11
UBR1-204ENST00000563239 GPR42O15529 346 aa8.11□□□□□ -1.11
UBR1-204ENST00000563239 CCNT2O60583 730 aaKnown RBP8.11□□□□□ -1.11
UBR1-204ENST00000563239 WFS1O76024 890 aa8.11□□□□□ -1.11
UBR1-204ENST00000563239 SIX3O95343 332 aaPredicted RBP8.11□□□□□ -1.11
UBR1-204ENST00000563239 B3GALT4O96024 378 aa8.11□□□□□ -1.11
UBR1-204ENST00000563239 S100BP04271 92 aaPredicted RBP8.11□□□□□ -1.11
UBR1-204ENST00000563239 RBP1P09455 135 aa8.11□□□□□ -1.11
UBR1-204ENST00000563239 NUDT17P0C025 328 aa8.11□□□□□ -1.11
UBR1-204ENST00000563239 SMIM10L1P0DMW3 83 aa8.11□□□□□ -1.11
UBR1-204ENST00000563239 GRK3P35626 688 aa8.11□□□□□ -1.11
UBR1-204ENST00000563239 SLCO1A2P46721 670 aa8.11□□□□□ -1.11
UBR1-204ENST00000563239 PWP1Q13610 501 aa8.11□□□□□ -1.11
UBR1-204ENST00000563239 DSG2Q14126 1118 aa8.11□□□□□ -1.11
UBR1-204ENST00000563239 PCBP2Q15366 365 aaKnown RBP eCLIP8.11□□□□□ -1.11
UBR1-204ENST00000563239 TBCCQ15814 346 aa8.11□□□□□ -1.11
UBR1-204ENST00000563239 SYT16Q17RD7 645 aa8.11□□□□□ -1.11
UBR1-204ENST00000563239 TSNAXIP1Q2TAA8 658 aa8.11□□□□□ -1.11
UBR1-204ENST00000563239 LGSNQ5TDP6 509 aa8.11□□□□□ -1.11
UBR1-204ENST00000563239 PRMT9Q6P2P2 845 aa8.11□□□□□ -1.11
UBR1-204ENST00000563239 KLC3Q6P597 504 aa8.11□□□□□ -1.11
UBR1-204ENST00000563239 EMBQ6PCB8 327 aa8.11□□□□□ -1.11
UBR1-204ENST00000563239 PPP1R32Q7Z5V6 425 aa8.11□□□□□ -1.11
UBR1-204ENST00000563239 LAPTM4BQ86VI4 370 aa8.11□□□□□ -1.11
UBR1-204ENST00000563239 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.11□□□□□ -1.112e-7■■■■■ 278.5
UBR1-204ENST00000563239 MREGQ8N565 214 aa8.11□□□□□ -1.11
UBR1-204ENST00000563239 SNX31Q8N9S9 440 aa8.11□□□□□ -1.11
UBR1-204ENST00000563239 CAMKVQ8NCB2 501 aa8.11□□□□□ -1.11
UBR1-204ENST00000563239 OR9A4Q8NGU2 314 aa8.11□□□□□ -1.11
UBR1-204ENST00000563239 ACMSDQ8TDX5 336 aa8.11□□□□□ -1.11
UBR1-204ENST00000563239 MVB12AQ96EY5 273 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms