RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 RETP07949 1114 aa18.35■□□□□ 0.53
SMPD3-203ENST00000563226 GAB1Q13480 694 aa18.35■□□□□ 0.53
SMPD3-203ENST00000563226 RBBP5Q15291 538 aaKnown RBP18.35■□□□□ 0.53
SMPD3-203ENST00000563226 KIAA1161Q6NSJ0 714 aa18.35■□□□□ 0.53
SMPD3-203ENST00000563226 FAM124AQ86V42 546 aa18.35■□□□□ 0.53
SMPD3-203ENST00000563226 LINC01555Q8NAE3 123 aa18.35■□□□□ 0.53
SMPD3-203ENST00000563226 STARD8Q92502 1023 aa18.35■□□□□ 0.53
SMPD3-203ENST00000563226 TMBIM1Q969X1 311 aa18.35■□□□□ 0.53
SMPD3-203ENST00000563226 COQ8BQ96D53 544 aa18.35■□□□□ 0.53
SMPD3-203ENST00000563226 DPH2Q9BQC3 489 aaPredicted RBP18.35■□□□□ 0.53
SMPD3-203ENST00000563226 ADI1Q9BV57 179 aa18.35■□□□□ 0.53
SMPD3-203ENST00000563226 SIRT5Q9NXA8 310 aa18.35■□□□□ 0.53
SMPD3-203ENST00000563226 SH3BP4Q9P0V3 963 aa18.35■□□□□ 0.53
SMPD3-203ENST00000563226 HEATR5BQ9P2D3 2071 aa18.35■□□□□ 0.53
SMPD3-203ENST00000563226 TBC1D3DA0A087WVF3 549 aa18.35■□□□□ 0.53
SMPD3-203ENST00000563226 TBC1D3IA0A087WXS9 549 aa18.35■□□□□ 0.53
SMPD3-203ENST00000563226 TBC1D3EA0A087X179 549 aa18.35■□□□□ 0.53
SMPD3-203ENST00000563226 TBC1D3KA0A087X1G2 549 aa18.35■□□□□ 0.53
SMPD3-203ENST00000563226 TBC1D3FA6NER0 549 aaPredicted RBP18.35■□□□□ 0.53
SMPD3-203ENST00000563226 EVPLLA8MZ36 301 aa18.35■□□□□ 0.53
SMPD3-203ENST00000563226 GPR89AB7ZAQ6 455 aa18.35■□□□□ 0.53
SMPD3-203ENST00000563226 TBC1D3LB9A6J9 549 aa18.35■□□□□ 0.53
SMPD3-203ENST00000563226 SLC31A1O15431 190 aa18.35■□□□□ 0.53
SMPD3-203ENST00000563226 RPN2P04844 631 aa18.35■□□□□ 0.53
SMPD3-203ENST00000563226 TBC1D3HP0C7X1 549 aa18.35■□□□□ 0.53
SMPD3-203ENST00000563226 GPR89BP0CG08 455 aa18.35■□□□□ 0.53
SMPD3-203ENST00000563226 PAX7P23759 505 aa18.35■□□□□ 0.53
SMPD3-203ENST00000563226 PIK3CBP42338 1070 aa18.35■□□□□ 0.53
SMPD3-203ENST00000563226 IST1P53990 364 aa18.35■□□□□ 0.53
SMPD3-203ENST00000563226 DMPKQ09013 629 aa18.35■□□□□ 0.53
SMPD3-203ENST00000563226 ARHGAP19Q14CB8 494 aa18.35■□□□□ 0.53
SMPD3-203ENST00000563226 C16orf72Q14CZ0 275 aa18.35■□□□□ 0.53
SMPD3-203ENST00000563226 C10orf62Q5T681 223 aaPredicted RBP18.35■□□□□ 0.53
SMPD3-203ENST00000563226 TBC1D3GQ6DHY5 549 aa18.35■□□□□ 0.53
SMPD3-203ENST00000563226 TBC1D3CQ6IPX1 549 aa18.35■□□□□ 0.53
SMPD3-203ENST00000563226 SDE2Q6IQ49 451 aa18.35■□□□□ 0.53
SMPD3-203ENST00000563226 ZCCHC8Q6NZY4 707 aaKnown RBP18.35■□□□□ 0.53
SMPD3-203ENST00000563226 GALNT10Q86SR1 603 aa18.35■□□□□ 0.53
SMPD3-203ENST00000563226 SERPINA11Q86U17 422 aa18.35■□□□□ 0.53
SMPD3-203ENST00000563226 C17orf64Q86WR6 236 aa18.35■□□□□ 0.53
SMPD3-203ENST00000563226 APLFQ8IW19 511 aaPredicted RBP18.35■□□□□ 0.53
SMPD3-203ENST00000563226 ZZZ3Q8IYH5 903 aa18.35■□□□□ 0.53
SMPD3-203ENST00000563226 TBC1D3Q8IZP1 549 aaPredicted RBP18.35■□□□□ 0.53
SMPD3-203ENST00000563226 METTL4Q8N3J2 472 aa18.35■□□□□ 0.53
SMPD3-203ENST00000563226 MAGEE2Q8TD90 523 aaPredicted RBP18.35■□□□□ 0.53
SMPD3-203ENST00000563226 SNX19Q92543 992 aa18.35■□□□□ 0.53
SMPD3-203ENST00000563226 FERD3LQ96RJ6 166 aa18.35■□□□□ 0.53
SMPD3-203ENST00000563226 YIPF3Q9GZM5 350 aa18.35■□□□□ 0.53
SMPD3-203ENST00000563226 MOSPD1Q9UJG1 213 aa18.35■□□□□ 0.53
SMPD3-203ENST00000563226 ACSL5Q9ULC5 683 aa18.35■□□□□ 0.53
SMPD3-203ENST00000563226 DEAF1O75398 565 aaPredicted RBP18.34■□□□□ 0.53
SMPD3-203ENST00000563226 KCNK5O95279 499 aa18.34■□□□□ 0.53
SMPD3-203ENST00000563226 KLK1P06870 262 aa18.34■□□□□ 0.53
SMPD3-203ENST00000563226 GPX2P18283 190 aa18.34■□□□□ 0.53
SMPD3-203ENST00000563226 CYP4F2P78329 520 aa18.34■□□□□ 0.53
SMPD3-203ENST00000563226 MERTKQ12866 999 aa18.34■□□□□ 0.53
SMPD3-203ENST00000563226 MAP7Q14244 749 aa18.34■□□□□ 0.53
SMPD3-203ENST00000563226 PRSS53Q2L4Q9 553 aa18.34■□□□□ 0.53
SMPD3-203ENST00000563226 OTUD3Q5T2D3 398 aaPredicted RBP18.34■□□□□ 0.53
SMPD3-203ENST00000563226 HORMAD1Q86X24 394 aa18.34■□□□□ 0.53
SMPD3-203ENST00000563226 PTOV1Q86YD1 416 aa18.34■□□□□ 0.53
SMPD3-203ENST00000563226 ANKRD53Q8N9V6 530 aa18.34■□□□□ 0.53
SMPD3-203ENST00000563226 OR4K1Q8NGD4 311 aa18.34■□□□□ 0.53
SMPD3-203ENST00000563226 C16orf78Q8WTQ4 265 aa18.34■□□□□ 0.53
SMPD3-203ENST00000563226 BTBD1Q9H0C5 482 aa18.34■□□□□ 0.53
SMPD3-203ENST00000563226 XKR8Q9H6D3 395 aa18.34■□□□□ 0.53
SMPD3-203ENST00000563226 SOX17Q9H6I2 414 aaPredicted RBP18.34■□□□□ 0.53
SMPD3-203ENST00000563226 ATP6V1HQ9UI12 483 aa18.34■□□□□ 0.53
SMPD3-203ENST00000563226 BTNL2Q9UIR0 455 aa18.34■□□□□ 0.53
SMPD3-203ENST00000563226 SUFUQ9UMX1 484 aa18.34■□□□□ 0.53
SMPD3-203ENST00000563226 SLC17A4Q9Y2C5 497 aa18.34■□□□□ 0.53
SMPD3-203ENST00000563226 PCDHB11Q9Y5F2 797 aa18.34■□□□□ 0.53
SMPD3-203ENST00000563226 FEZF1A0PJY2 475 aa18.34■□□□□ 0.53
SMPD3-203ENST00000563226 C1orf226A1L170 272 aa18.34■□□□□ 0.53
SMPD3-203ENST00000563226 CLIC3O95833 236 aa18.34■□□□□ 0.53
SMPD3-203ENST00000563226 RPS9P46781 194 aaKnown RBP18.34■□□□□ 0.53
SMPD3-203ENST00000563226 CLCA4Q14CN2 919 aa18.34■□□□□ 0.53
SMPD3-203ENST00000563226 MMP21Q8N119 569 aa18.34■□□□□ 0.53
SMPD3-203ENST00000563226 FAM47BQ8NA70 645 aa18.34■□□□□ 0.53
SMPD3-203ENST00000563226 FBXL20Q96IG2 436 aa18.34■□□□□ 0.53
SMPD3-203ENST00000563226 TIMM29Q9BSF4 260 aa18.34■□□□□ 0.53
SMPD3-203ENST00000563226 APOOQ9BUR5 198 aa18.34■□□□□ 0.53
SMPD3-203ENST00000563226 REEP4Q9H6H4 257 aa18.34■□□□□ 0.53
SMPD3-203ENST00000563226 TPT1P8Q9HAU6 139 aa18.34■□□□□ 0.53
SMPD3-203ENST00000563226 AASDHPPTQ9NRN7 309 aa18.34■□□□□ 0.53
SMPD3-203ENST00000563226 IMP3Q9NV31 184 aaKnown RBP18.34■□□□□ 0.53
SMPD3-203ENST00000563226 PRAMEF33A0A0G2JMD5 474 aa18.33■□□□□ 0.52
SMPD3-203ENST00000563226 SNAP29O95721 258 aa18.33■□□□□ 0.52
SMPD3-203ENST00000563226 TAS2R50P59544 299 aa18.33■□□□□ 0.52
SMPD3-203ENST00000563226 ADRM1Q16186 407 aa18.33■□□□□ 0.52
SMPD3-203ENST00000563226 MPEG1Q2M385 716 aa18.33■□□□□ 0.52
SMPD3-203ENST00000563226 SLC36A3Q495N2 470 aa18.33■□□□□ 0.52
SMPD3-203ENST00000563226 LIN52Q52LA3 116 aa18.33■□□□□ 0.52
SMPD3-203ENST00000563226 KRT78Q8N1N4 520 aa18.33■□□□□ 0.52
SMPD3-203ENST00000563226 SMPDL3AQ92484 453 aa18.33■□□□□ 0.52
SMPD3-203ENST00000563226 UBE2E3Q969T4 207 aa18.33■□□□□ 0.52
SMPD3-203ENST00000563226 CIDECQ96AQ7 238 aaPredicted RBP18.33■□□□□ 0.52
SMPD3-203ENST00000563226 OLAHQ9NV23 265 aa18.33■□□□□ 0.52
SMPD3-203ENST00000563226 SPATA7Q9P0W8 599 aa18.33■□□□□ 0.52
SMPD3-203ENST00000563226 GPSM3Q9Y4H4 160 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms