RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 MS4A8Q9BY19 250 aa17.29■□□□□ 0.36
COMMD4-208ENST00000563220 DUSP15Q9H1R2 295 aaPredicted RBP17.29■□□□□ 0.36
COMMD4-208ENST00000563220 PCDHA9Q9Y5H5 950 aa17.29■□□□□ 0.36
COMMD4-208ENST00000563220 ARHGEF17Q96PE2 2063 aaPredicted RBP17.29■□□□□ 0.36
COMMD4-208ENST00000563220 H0Y3Z8 333 aa17.29■□□□□ 0.36
COMMD4-208ENST00000563220 PCDH7O60245 1069 aa17.29■□□□□ 0.36
COMMD4-208ENST00000563220 CMPK1P30085 196 aa17.29■□□□□ 0.36
COMMD4-208ENST00000563220 CSNK1EP49674 416 aaKnown RBP17.29■□□□□ 0.36
COMMD4-208ENST00000563220 NXPH1P58417 271 aa17.29■□□□□ 0.36
COMMD4-208ENST00000563220 FOXM1Q08050 763 aa17.29■□□□□ 0.36
COMMD4-208ENST00000563220 SIGLEC14Q08ET2 396 aa17.29■□□□□ 0.36
COMMD4-208ENST00000563220 UGT8Q16880 541 aa17.29■□□□□ 0.36
COMMD4-208ENST00000563220 PRMT9Q6P2P2 845 aa17.29■□□□□ 0.36
COMMD4-208ENST00000563220 DHDDSQ86SQ9 333 aa17.29■□□□□ 0.36
COMMD4-208ENST00000563220 ZDHHC1Q8WTX9 485 aa17.29■□□□□ 0.36
COMMD4-208ENST00000563220 OR52E6Q96RD3 313 aa17.29■□□□□ 0.36
COMMD4-208ENST00000563220 F2RL3Q96RI0 385 aa17.29■□□□□ 0.36
COMMD4-208ENST00000563220 SORBS1Q9BX66 1292 aaKnown RBP17.29■□□□□ 0.36
COMMD4-208ENST00000563220 FANCMQ8IYD8 2048 aa17.28■□□□□ 0.36
COMMD4-208ENST00000563220 TRBC2A0A5B9 178 aa17.28■□□□□ 0.36
COMMD4-208ENST00000563220 OR6C74A6NCV1 312 aa17.28■□□□□ 0.36
COMMD4-208ENST00000563220 HAT1O14929 419 aa17.28■□□□□ 0.36
COMMD4-208ENST00000563220 PSMG1O95456 288 aa17.28■□□□□ 0.36
COMMD4-208ENST00000563220 B3GALT4O96024 378 aa17.28■□□□□ 0.36
COMMD4-208ENST00000563220 NPPAP01160 153 aa17.28■□□□□ 0.36
COMMD4-208ENST00000563220 HOXA6P31267 233 aa17.28■□□□□ 0.36
COMMD4-208ENST00000563220 S100A3P33764 101 aa17.28■□□□□ 0.36
COMMD4-208ENST00000563220 BCL6P41182 706 aa17.28■□□□□ 0.36
COMMD4-208ENST00000563220 FNTBP49356 437 aa17.28■□□□□ 0.36
COMMD4-208ENST00000563220 PWP1Q13610 501 aa17.28■□□□□ 0.36
COMMD4-208ENST00000563220 MAPKAPK3Q16644 382 aa17.28■□□□□ 0.36
COMMD4-208ENST00000563220 HKDC1Q2TB90 917 aa17.28■□□□□ 0.36
COMMD4-208ENST00000563220 PGS1Q32NB8 556 aa17.28■□□□□ 0.36
COMMD4-208ENST00000563220 RABL3Q5HYI8 236 aa17.28■□□□□ 0.36
COMMD4-208ENST00000563220 SAMD4BQ5PRF9 694 aaKnown RBP17.28■□□□□ 0.36
COMMD4-208ENST00000563220 KHDRBS2Q5VWX1 349 aaKnown RBP17.28■□□□□ 0.36
COMMD4-208ENST00000563220 ZNF425Q6IV72 752 aa17.28■□□□□ 0.36
COMMD4-208ENST00000563220 NANOGP8Q6NSW7 305 aa17.28■□□□□ 0.36
COMMD4-208ENST00000563220 SLC9B2Q86UD5 537 aa17.28■□□□□ 0.36
COMMD4-208ENST00000563220 HIPK4Q8NE63 616 aa17.28■□□□□ 0.36
COMMD4-208ENST00000563220 OR7A2PQ8NGA2 310 aa17.28■□□□□ 0.36
COMMD4-208ENST00000563220 CDC26Q8NHZ8 85 aa17.28■□□□□ 0.36
COMMD4-208ENST00000563220 TMEM125Q96AQ2 219 aa17.28■□□□□ 0.36
COMMD4-208ENST00000563220 OR2A14Q96R47 310 aa17.28■□□□□ 0.36
COMMD4-208ENST00000563220 MYCBPQ99417 103 aaPredicted RBP17.28■□□□□ 0.36
COMMD4-208ENST00000563220 NANOGQ9H9S0 305 aa17.28■□□□□ 0.36
COMMD4-208ENST00000563220 NEUROG3Q9Y4Z2 214 aa17.28■□□□□ 0.36
COMMD4-208ENST00000563220 GNG14A0A1W2PPG7 69 aa17.27■□□□□ 0.36
COMMD4-208ENST00000563220 ACOT8O14734 319 aa17.27■□□□□ 0.36
COMMD4-208ENST00000563220 PRMT3O60678 531 aa17.27■□□□□ 0.36
COMMD4-208ENST00000563220 CCNDBP1O95273 360 aa17.27■□□□□ 0.36
COMMD4-208ENST00000563220 KLK1P06870 262 aa17.27■□□□□ 0.36
COMMD4-208ENST00000563220 POLR2CP19387 275 aaPredicted RBP17.27■□□□□ 0.36
COMMD4-208ENST00000563220 C21orf58P58505 322 aa17.27■□□□□ 0.36
COMMD4-208ENST00000563220 KIR2DS3Q14952 304 aa17.27■□□□□ 0.36
COMMD4-208ENST00000563220 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.27■□□□□ 0.36
COMMD4-208ENST00000563220 LMX1AQ8TE12 382 aa17.27■□□□□ 0.36
COMMD4-208ENST00000563220 CREB3L4Q8TEY5 395 aa17.27■□□□□ 0.36
COMMD4-208ENST00000563220 PPM1MQ96MI6 270 aa17.27■□□□□ 0.36
COMMD4-208ENST00000563220 PCDHAC1Q9H158 963 aa17.27■□□□□ 0.36
COMMD4-208ENST00000563220 SYNPO2LQ9H987 977 aa17.27■□□□□ 0.36
COMMD4-208ENST00000563220 EXO1Q9UQ84 846 aaKnown RBP17.27■□□□□ 0.36
COMMD4-208ENST00000563220 BTBD3Q9Y2F9 522 aa17.27■□□□□ 0.36
COMMD4-208ENST00000563220 CACNA1IQ9P0X4 2223 aa17.27■□□□□ 0.36
COMMD4-208ENST00000563220 B4DGG1 531 aa17.27■□□□□ 0.35
COMMD4-208ENST00000563220 RTCAO00442 366 aaKnown RBP17.27■□□□□ 0.35
COMMD4-208ENST00000563220 PLPP1O14494 284 aa17.27■□□□□ 0.35
COMMD4-208ENST00000563220 SERPINB1P30740 379 aa17.27■□□□□ 0.35
COMMD4-208ENST00000563220 GRIA3P42263 894 aa17.27■□□□□ 0.35
COMMD4-208ENST00000563220 ELOCQ15369 112 aa17.27■□□□□ 0.35
COMMD4-208ENST00000563220 OR4F3Q6IEY1 312 aa17.27■□□□□ 0.35
COMMD4-208ENST00000563220 TRIM73Q86UV7 250 aa17.27■□□□□ 0.35
COMMD4-208ENST00000563220 ZNF761Q86XN6 746 aaPredicted RBP17.27■□□□□ 0.35
COMMD4-208ENST00000563220 OR10G6Q8NH81 332 aa17.27■□□□□ 0.35
COMMD4-208ENST00000563220 EDAQ92838 391 aa17.27■□□□□ 0.35
COMMD4-208ENST00000563220 SLC22A18Q96BI1 424 aa17.27■□□□□ 0.35
COMMD4-208ENST00000563220 CGREF1Q99674 301 aa17.27■□□□□ 0.35
COMMD4-208ENST00000563220 SARGQ9BW04 601 aa17.27■□□□□ 0.35
COMMD4-208ENST00000563220 ZNF717Q9BY31 904 aaPredicted RBP17.27■□□□□ 0.35
COMMD4-208ENST00000563220 AICDAQ9GZX7 198 aa17.27■□□□□ 0.35
COMMD4-208ENST00000563220 DCLRE1BQ9H816 532 aa17.27■□□□□ 0.35
COMMD4-208ENST00000563220 SERHLQ9NQF3 203 aa17.27■□□□□ 0.35
COMMD4-208ENST00000563220 VAPAQ9P0L0 249 aa17.27■□□□□ 0.35
COMMD4-208ENST00000563220 USP34Q70CQ2 3546 aa17.26■□□□□ 0.35
COMMD4-208ENST00000563220 CCDC163A0A0D9SF12 145 aa17.26■□□□□ 0.35
COMMD4-208ENST00000563220 GABRR3A8MPY1 467 aa17.26■□□□□ 0.35
COMMD4-208ENST00000563220 VILLO15195 856 aa17.26■□□□□ 0.35
COMMD4-208ENST00000563220 YY2O15391 372 aa17.26■□□□□ 0.35
COMMD4-208ENST00000563220 TDGF1P13385 188 aa17.26■□□□□ 0.35
COMMD4-208ENST00000563220 HRH2P25021 359 aa17.26■□□□□ 0.35
COMMD4-208ENST00000563220 GRK3P35626 688 aa17.26■□□□□ 0.35
COMMD4-208ENST00000563220 ASMTP46597 345 aa17.26■□□□□ 0.35
COMMD4-208ENST00000563220 ATXN3P54252 364 aaPredicted RBP17.26■□□□□ 0.35
COMMD4-208ENST00000563220 WNT3P56703 355 aa17.26■□□□□ 0.35
COMMD4-208ENST00000563220 HHEXQ03014 270 aa17.26■□□□□ 0.35
COMMD4-208ENST00000563220 TRIM25Q14258 630 aaKnown RBP17.26■□□□□ 0.35
COMMD4-208ENST00000563220 CMPK2Q5EBM0 449 aa17.26■□□□□ 0.35
COMMD4-208ENST00000563220 C6orf10Q5SRN2 563 aa17.26■□□□□ 0.35
COMMD4-208ENST00000563220 ANKRD26P1Q6NSI1 321 aa17.26■□□□□ 0.35
COMMD4-208ENST00000563220 TMEM26Q6ZUK4 368 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms