RNA–Protein interactions for RNA: ENST00000563112.1

CLK3-210, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-210ENST00000563112 WFS1O76024 890 aa15.95■□□□□ 0.14
CLK3-210ENST00000563112 BMP10O95393 424 aa15.95■□□□□ 0.14
CLK3-210ENST00000563112 SERPINA7P05543 415 aa15.95■□□□□ 0.14
CLK3-210ENST00000563112 CYC1P08574 325 aa15.95■□□□□ 0.14
CLK3-210ENST00000563112 C8orf89P0DMQ9 161 aa15.95■□□□□ 0.14
CLK3-210ENST00000563112 ICAM2P13598 275 aa15.95■□□□□ 0.14
CLK3-210ENST00000563112 SKP1P63208 163 aa15.95■□□□□ 0.14
CLK3-210ENST00000563112 POU4F1Q01851 419 aa15.95■□□□□ 0.14
CLK3-210ENST00000563112 CAV1Q03135 178 aa15.95■□□□□ 0.14
CLK3-210ENST00000563112 MFAP5Q13361 173 aa15.95■□□□□ 0.14
CLK3-210ENST00000563112 ZXDCQ2QGD7 858 aaPredicted RBP15.95■□□□□ 0.14
CLK3-210ENST00000563112 MINDY4Q4G0A6 757 aa15.95■□□□□ 0.14
CLK3-210ENST00000563112 CRB2Q5IJ48 1285 aa15.95■□□□□ 0.14
CLK3-210ENST00000563112 NIPAL1Q6NVV3 410 aa15.95■□□□□ 0.14
CLK3-210ENST00000563112 TMEM205Q6UW68 189 aa15.95■□□□□ 0.14
CLK3-210ENST00000563112 SYT10Q6XYQ8 523 aa15.95■□□□□ 0.14
CLK3-210ENST00000563112 LINC00696Q6ZRV3 163 aa15.95■□□□□ 0.14
CLK3-210ENST00000563112 RIPOR1Q6ZS17 1223 aa15.95■□□□□ 0.14
CLK3-210ENST00000563112 FRA10AC1Q70Z53 315 aa15.95■□□□□ 0.14
CLK3-210ENST00000563112 ADAMTSL2Q86TH1 951 aa15.95■□□□□ 0.14
CLK3-210ENST00000563112 KCT2Q8NC54 265 aa15.95■□□□□ 0.14
CLK3-210ENST00000563112 OR4K1Q8NGD4 311 aa15.95■□□□□ 0.14
CLK3-210ENST00000563112 OR51Q1Q8NH59 317 aa15.95■□□□□ 0.14
CLK3-210ENST00000563112 C19orf60Q96EN9 201 aa15.95■□□□□ 0.14
CLK3-210ENST00000563112 TSPAN17Q96FV3 270 aa15.95■□□□□ 0.14
CLK3-210ENST00000563112 CNDP1Q96KN2 507 aa15.95■□□□□ 0.14
CLK3-210ENST00000563112 MESP1Q9BRJ9 268 aa15.95■□□□□ 0.14
CLK3-210ENST00000563112 SARGQ9BW04 601 aa15.95■□□□□ 0.14
CLK3-210ENST00000563112 RAB17Q9H0T7 212 aa15.95■□□□□ 0.14
CLK3-210ENST00000563112 HCN3Q9P1Z3 774 aa15.95■□□□□ 0.14
CLK3-210ENST00000563112 C19orf25Q9UFG5 118 aaPredicted RBP15.95■□□□□ 0.14
CLK3-210ENST00000563112 SLC22A7Q9Y694 548 aa15.95■□□□□ 0.14
CLK3-210ENST00000563112 KCNE2Q9Y6J6 123 aa15.95■□□□□ 0.14
CLK3-210ENST00000563112 SPTAN1Q13813 2472 aaKnown RBP15.94■□□□□ 0.14
CLK3-210ENST00000563112 COL12A1Q99715 3063 aa15.94■□□□□ 0.14
CLK3-210ENST00000563112 SCN3AQ9NY46 2000 aa15.94■□□□□ 0.14
CLK3-210ENST00000563112 LOC102723996A0A087X1L8 192 aa15.94■□□□□ 0.14
CLK3-210ENST00000563112 NPEPPSL1A6NEC2 478 aa15.94■□□□□ 0.14
CLK3-210ENST00000563112 TCP11X1B4DZS4 312 aa15.94■□□□□ 0.14
CLK3-210ENST00000563112 SGK494L7N484 410 aa15.94■□□□□ 0.14
CLK3-210ENST00000563112 CDC7O00311 574 aa15.94■□□□□ 0.14
CLK3-210ENST00000563112 AGFG2O95081 481 aa15.94■□□□□ 0.14
CLK3-210ENST00000563112 SERPIND1P05546 499 aa15.94■□□□□ 0.14
CLK3-210ENST00000563112 GSTA2P09210 222 aa15.94■□□□□ 0.14
CLK3-210ENST00000563112 PRR35P0CG20 571 aa15.94■□□□□ 0.14
CLK3-210ENST00000563112 SSTR1P30872 391 aa15.94■□□□□ 0.14
CLK3-210ENST00000563112 XCR1P46094 333 aa15.94■□□□□ 0.14
CLK3-210ENST00000563112 HNMTP50135 292 aa15.94■□□□□ 0.14
CLK3-210ENST00000563112 CDKL1Q00532 357 aa15.94■□□□□ 0.14
CLK3-210ENST00000563112 MEF2AQ02078 507 aaPredicted RBP15.94■□□□□ 0.14
CLK3-210ENST00000563112 PWP1Q13610 501 aa15.94■□□□□ 0.14
CLK3-210ENST00000563112 ZNF460Q14592 562 aa15.94■□□□□ 0.14
CLK3-210ENST00000563112 HERC3Q15034 1050 aa15.94■□□□□ 0.14
CLK3-210ENST00000563112 TLR1Q15399 786 aa15.94■□□□□ 0.14
CLK3-210ENST00000563112 PPP1R3AQ16821 1122 aa15.94■□□□□ 0.14
CLK3-210ENST00000563112 PRSS41Q7RTY9 318 aa15.94■□□□□ 0.14
CLK3-210ENST00000563112 CUZD1Q86UP6 607 aa15.94■□□□□ 0.14
CLK3-210ENST00000563112 THOC6Q86W42 341 aaKnown RBP15.94■□□□□ 0.14
CLK3-210ENST00000563112 NEIL2Q969S2 332 aa15.94■□□□□ 0.14
CLK3-210ENST00000563112 OR4K3Q96R72 315 aa15.94■□□□□ 0.14
CLK3-210ENST00000563112 TUBB6Q9BUF5 446 aa15.94■□□□□ 0.14
CLK3-210ENST00000563112 ZNF700Q9H0M5 742 aa15.94■□□□□ 0.14
CLK3-210ENST00000563112 PELI2Q9HAT8 420 aa15.94■□□□□ 0.14
CLK3-210ENST00000563112 AGPAT4Q9NRZ5 378 aa15.94■□□□□ 0.14
CLK3-210ENST00000563112 ASF1BQ9NVP2 202 aa15.94■□□□□ 0.14
CLK3-210ENST00000563112 IKZF3Q9UKT9 509 aa15.94■□□□□ 0.14
CLK3-210ENST00000563112 OARD1Q9Y530 152 aa15.94■□□□□ 0.14
CLK3-210ENST00000563112 PCDHGA10Q9Y5H3 936 aa15.94■□□□□ 0.14
CLK3-210ENST00000563112 DYTNA2CJ06 578 aa15.93■□□□□ 0.14
CLK3-210ENST00000563112 NDUFS4O43181 175 aa15.93■□□□□ 0.14
CLK3-210ENST00000563112 JRKO75564 520 aa15.93■□□□□ 0.14
CLK3-210ENST00000563112 KLHL18O94889 574 aa15.93■□□□□ 0.14
CLK3-210ENST00000563112 IL10P22301 178 aa15.93■□□□□ 0.14
CLK3-210ENST00000563112 PLTPP55058 493 aa15.93■□□□□ 0.14
CLK3-210ENST00000563112 SRSF1Q07955 248 aaKnown RBP eCLIP15.93■□□□□ 0.14
CLK3-210ENST00000563112 RGS1Q08116 209 aa15.93■□□□□ 0.14
CLK3-210ENST00000563112 ELOAQ14241 798 aaKnown RBP15.93■□□□□ 0.14
CLK3-210ENST00000563112 ZNF169Q14929 603 aaPredicted RBP15.93■□□□□ 0.14
CLK3-210ENST00000563112 CATSPEREQ5SY80 951 aa15.93■□□□□ 0.14
CLK3-210ENST00000563112 C3orf62Q6ZUJ4 267 aa15.93■□□□□ 0.14
CLK3-210ENST00000563112 CYS1Q717R9 158 aa15.93■□□□□ 0.14
CLK3-210ENST00000563112 C17orf53Q8N3J3 647 aaPredicted RBP15.93■□□□□ 0.14
CLK3-210ENST00000563112 BRIX1Q8TDN6 353 aaKnown RBP15.93■□□□□ 0.14
CLK3-210ENST00000563112 TSNARE1Q96NA8 513 aa15.93■□□□□ 0.14
CLK3-210ENST00000563112 CYTH2Q99418 400 aa15.93■□□□□ 0.14
CLK3-210ENST00000563112 CPNE1Q99829 537 aa15.93■□□□□ 0.14
CLK3-210ENST00000563112 AIF1LQ9BQI0 150 aa15.93■□□□□ 0.14
CLK3-210ENST00000563112 VN1R1Q9GZP7 353 aa15.93■□□□□ 0.14
CLK3-210ENST00000563112 SMYD2Q9NRG4 433 aa15.93■□□□□ 0.14
CLK3-210ENST00000563112 GRHL1Q9NZI5 618 aa15.93■□□□□ 0.14
CLK3-210ENST00000563112 PTGFRNQ9P2B2 879 aa15.93■□□□□ 0.14
CLK3-210ENST00000563112 ZFP69BQ9UJL9 534 aa15.93■□□□□ 0.14
CLK3-210ENST00000563112 SLC22A14Q9Y267 594 aa15.93■□□□□ 0.14
CLK3-210ENST00000563112 NAALAD2Q9Y3Q0 740 aa15.93■□□□□ 0.14
CLK3-210ENST00000563112 SPTBN1Q01082 2364 aaKnown RBP15.93■□□□□ 0.14
CLK3-210ENST00000563112 URADA6NGE7 173 aa15.92■□□□□ 0.14
CLK3-210ENST00000563112 RDH16O75452 317 aa15.92■□□□□ 0.14
CLK3-210ENST00000563112 ALOX12P18054 663 aa15.92■□□□□ 0.14
CLK3-210ENST00000563112 AHRP35869 848 aa15.92■□□□□ 0.14
CLK3-210ENST00000563112 TSFMP43897 325 aaKnown RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms