RNA–Protein interactions for RNA: ENST00000562638.5

TCF4-215, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 401 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-215ENST00000562638 ATXN1LP0C7T5 689 aaKnown RBP4.79□□□□□ -1.64
TCF4-215ENST00000562638 CCNYL3P0C7X3 344 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 UMPSP11172 480 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 ATF2P15336 505 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 CHRM3P20309 590 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 HNF1AP20823 631 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 LHCGRP22888 699 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 EEF1B2P24534 225 aaKnown RBP4.79□□□□□ -1.64
TCF4-215ENST00000562638 CA5AP35218 305 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 SCNN1AP37088 669 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 LIMS1P48059 325 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 DGKGP49619 791 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 RGS6P49758 472 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 GMPSP49915 693 aaPredicted RBP4.79□□□□□ -1.64
TCF4-215ENST00000562638 PMS1P54277 932 aaKnown RBP4.79□□□□□ -1.64
TCF4-215ENST00000562638 EPHA4P54764 986 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 SNRPD2P62316 118 aaKnown RBP4.79□□□□□ -1.64
TCF4-215ENST00000562638 RAP1AP62834 184 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 VAMP2P63027 116 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 ZP2Q05996 745 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 EGR3Q06889 387 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 DUSP8Q13202 625 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 MAB21L1Q13394 359 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 NAE1Q13564 534 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 TP53BP2Q13625 1128 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 PTK6Q13882 451 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 SERTAD2Q14140 314 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 MLC1Q15049 377 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 TMED2Q15363 201 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 P2RY14Q15391 338 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 NRF1Q16656 503 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 ZNF404Q494X3 552 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 PTPN20Q4JDL3 420 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 TEX44Q53QW1 395 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 NHLRC3Q5JS37 347 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 EFHC2Q5JST6 749 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 COLEC12Q5KU26 742 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 C10orf120Q5SQS8 335 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 SPOUT1Q5T280 376 aaKnown RBP4.79□□□□□ -1.64
TCF4-215ENST00000562638 AVPI1Q5T686 147 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 IFIT1BQ5T764 474 aaKnown RBP4.79□□□□□ -1.64
TCF4-215ENST00000562638 TEDDM1Q5T9Z0 273 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 LCN1P1Q5VSP4 162 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 HACD4Q5VWC8 232 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 FAM46CQ5VWP2 391 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 ANKRD22Q5VYY1 191 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 JADE1Q6IE81 842 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 TAF2Q6P1X5 1199 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 C17orf107Q6ZR85 190 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 ZBTB49Q6ZSB9 765 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 SV2BQ7L1I2 683 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 SLC16A14Q7RTX9 510 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 KRT25Q7Z3Z0 450 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 NRARPQ7Z6K4 114 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 RFX6Q8HWS3 928 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 CCDC71Q8IV32 467 aaPredicted RBP4.79□□□□□ -1.64
TCF4-215ENST00000562638 ARID3BQ8IVW6 561 aaPredicted RBP4.79□□□□□ -1.64
TCF4-215ENST00000562638 DEFB107AQ8IZN7 70 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 TMEM132CQ8N3T6 1108 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 CCDC24Q8N4L8 307 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 ATPAF2Q8N5M1 289 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 PARP16Q8N5Y8 322 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 FAM181AQ8N9Y4 354 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 L3MBTL4Q8NA19 623 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 BHLHE22Q8NFJ8 381 aaPredicted RBP4.79□□□□□ -1.64
TCF4-215ENST00000562638 OR4K15Q8NH41 348 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 SPATA22Q8NHS9 363 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 CENPIQ92674 756 aaPredicted RBP4.79□□□□□ -1.64
TCF4-215ENST00000562638 TIFAQ96CG3 184 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 ACSF2Q96CM8 615 aaPredicted RBP4.79□□□□□ -1.64
TCF4-215ENST00000562638 FOXRED1Q96CU9 486 aaPredicted RBP4.79□□□□□ -1.64
TCF4-215ENST00000562638 PABPC5Q96DU9 382 aaKnown RBP4.79□□□□□ -1.64
TCF4-215ENST00000562638 L3HYPDHQ96EM0 354 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 ABHD17AQ96GS6 310 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 ZC3HAV1LQ96H79 300 aaKnown RBP4.79□□□□□ -1.64
TCF4-215ENST00000562638 FCRL3Q96P31 734 aaPredicted RBP4.79□□□□□ -1.64
TCF4-215ENST00000562638 NEDD4LQ96PU5 975 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 ATP6V0BQ99437 205 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 PRRX2Q99811 253 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 CPPED1Q9BRF8 314 aaPredicted RBP4.79□□□□□ -1.64
TCF4-215ENST00000562638 LXNQ9BS40 222 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 TRMOQ9BU70 441 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 TEX12Q9BXU0 123 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 POLDIP3Q9BY77 421 aaKnown RBP4.79□□□□□ -1.64
TCF4-215ENST00000562638 PPIL3Q9H2H8 161 aaKnown RBP4.79□□□□□ -1.64
TCF4-215ENST00000562638 TMPRSS5Q9H3S3 457 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 TOR3AQ9H497 397 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 PRDM13Q9H4Q3 707 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 KLHL31Q9H511 634 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 TMEM8AQ9HCN3 771 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 SPAG4Q9NPE6 437 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 IL1RAPQ9NPH3 570 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 C11orf16Q9NQ32 467 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 SIRT7Q9NRC8 400 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 TMEM184CQ9NVA4 438 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 PRMT7Q9NVM4 692 aaPredicted RBP4.79□□□□□ -1.64
TCF4-215ENST00000562638 OBP2AQ9NY56 170 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 TMEM181Q9P2C4 612 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 OR12D3Q9UGF7 316 aa4.79□□□□□ -1.64
TCF4-215ENST00000562638 WARS2Q9UGM6 360 aaKnown RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms