RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 ERGP11308 486 aa10.98□□□□□ -0.65
NSMCE1-202ENST00000561960 ICAM2P13598 275 aa10.98□□□□□ -0.65
NSMCE1-202ENST00000561960 EZRP15311 586 aaKnown RBP10.98□□□□□ -0.65
NSMCE1-202ENST00000561960 BCL6P41182 706 aa10.98□□□□□ -0.65
NSMCE1-202ENST00000561960 MEOX1P50221 254 aa10.98□□□□□ -0.65
NSMCE1-202ENST00000561960 ITGA8P53708 1063 aa10.98□□□□□ -0.65
NSMCE1-202ENST00000561960 BASP1P80723 227 aaKnown RBP10.98□□□□□ -0.65
NSMCE1-202ENST00000561960 PRDX1Q06830 199 aaKnown RBP10.98□□□□□ -0.65
NSMCE1-202ENST00000561960 OASLQ15646 514 aaKnown RBP10.98□□□□□ -0.65
NSMCE1-202ENST00000561960 NSDHLQ15738 373 aa10.98□□□□□ -0.65
NSMCE1-202ENST00000561960 PCID2Q5JVF3 399 aa10.98□□□□□ -0.65
NSMCE1-202ENST00000561960 C16orf47Q6ZP98 133 aaPredicted RBP10.98□□□□□ -0.65
NSMCE1-202ENST00000561960 Q71RC1 249 aaPredicted RBP10.98□□□□□ -0.65
NSMCE1-202ENST00000561960 KIAA1328Q86T90 577 aa10.98□□□□□ -0.65
NSMCE1-202ENST00000561960 ZNF227Q86WZ6 799 aa10.98□□□□□ -0.65
NSMCE1-202ENST00000561960 MPP5Q8N3R9 675 aa10.98□□□□□ -0.65
NSMCE1-202ENST00000561960 MVB12AQ96EY5 273 aa10.98□□□□□ -0.65
NSMCE1-202ENST00000561960 C14orf79Q96F83 325 aa10.98□□□□□ -0.65
NSMCE1-202ENST00000561960 SPOCK3Q9BQ16 436 aa10.98□□□□□ -0.65
NSMCE1-202ENST00000561960 TRIM5Q9C035 493 aa10.98□□□□□ -0.65
NSMCE1-202ENST00000561960 ENKD1Q9H0I2 346 aa10.98□□□□□ -0.65
NSMCE1-202ENST00000561960 TSPY26PQ9H489 355 aa10.98□□□□□ -0.65
NSMCE1-202ENST00000561960 FBXO6Q9NRD1 293 aaPredicted RBP10.98□□□□□ -0.65
NSMCE1-202ENST00000561960 TREX1Q9NSU2 369 aa10.98□□□□□ -0.65
NSMCE1-202ENST00000561960 NAALAD2Q9Y3Q0 740 aa10.98□□□□□ -0.65
NSMCE1-202ENST00000561960 EPN1Q9Y6I3 576 aaPredicted RBP10.98□□□□□ -0.65
NSMCE1-202ENST00000561960 ARHGAP21Q5T5U3 1957 aa10.97□□□□□ -0.65
NSMCE1-202ENST00000561960 MYOCOSA0A1B0GUC4 107 aa10.97□□□□□ -0.65
NSMCE1-202ENST00000561960 ASPDHA6ND91 283 aa10.97□□□□□ -0.65
NSMCE1-202ENST00000561960 E7ENX8 843 aa10.97□□□□□ -0.65
NSMCE1-202ENST00000561960 G3V3Y1 287 aa10.97□□□□□ -0.65
NSMCE1-202ENST00000561960 PRRG2O14669 202 aa10.97□□□□□ -0.65
NSMCE1-202ENST00000561960 TFECO14948 347 aaPredicted RBP10.97□□□□□ -0.65
NSMCE1-202ENST00000561960 LCMT2O60294 686 aaKnown RBP10.97□□□□□ -0.65
NSMCE1-202ENST00000561960 PSIP1O75475 530 aaKnown RBP10.97□□□□□ -0.65
NSMCE1-202ENST00000561960 MYBL2P10244 700 aa10.97□□□□□ -0.65
NSMCE1-202ENST00000561960 HOXB4P17483 251 aaPredicted RBP10.97□□□□□ -0.65
NSMCE1-202ENST00000561960 AGAP20933 346 aa10.97□□□□□ -0.65
NSMCE1-202ENST00000561960 IMPA1P29218 277 aa10.97□□□□□ -0.65
NSMCE1-202ENST00000561960 RPL22P35268 128 aaKnown RBP10.97□□□□□ -0.65
NSMCE1-202ENST00000561960 FDFT1P37268 417 aa10.97□□□□□ -0.65
NSMCE1-202ENST00000561960 PGGT1BP53609 377 aa10.97□□□□□ -0.65
NSMCE1-202ENST00000561960 OR4D2P58180 307 aa10.97□□□□□ -0.65
NSMCE1-202ENST00000561960 RHAGQ02094 409 aa10.97□□□□□ -0.65
NSMCE1-202ENST00000561960 TAP2Q03519 686 aa10.97□□□□□ -0.65
NSMCE1-202ENST00000561960 MYBPHQ13203 477 aa10.97□□□□□ -0.65
NSMCE1-202ENST00000561960 USP10Q14694 798 aaKnown RBP10.97□□□□□ -0.65
NSMCE1-202ENST00000561960 TRIP13Q15645 432 aaPredicted RBP10.97□□□□□ -0.65
NSMCE1-202ENST00000561960 NDUFA9Q16795 377 aa10.97□□□□□ -0.65
NSMCE1-202ENST00000561960 KRTCAP3Q53RY4 240 aa10.97□□□□□ -0.65
NSMCE1-202ENST00000561960 GARNL3Q5VVW2 1013 aa10.97□□□□□ -0.65
NSMCE1-202ENST00000561960 SLC25A25Q6KCM7 469 aa10.97□□□□□ -0.65
NSMCE1-202ENST00000561960 H3F3CQ6NXT2 135 aa10.97□□□□□ -0.65
NSMCE1-202ENST00000561960 PIWIL4Q7Z3Z4 852 aaKnown RBP10.97□□□□□ -0.65
NSMCE1-202ENST00000561960 SLC26A11Q86WA9 606 aa10.97□□□□□ -0.65
NSMCE1-202ENST00000561960 CCDC170Q8IYT3 715 aa10.97□□□□□ -0.65
NSMCE1-202ENST00000561960 UBL4BQ8N7F7 174 aa10.97□□□□□ -0.65
NSMCE1-202ENST00000561960 CCDC89Q8N998 374 aa10.97□□□□□ -0.65
NSMCE1-202ENST00000561960 TMEM178AQ8NBL3 297 aa10.97□□□□□ -0.65
NSMCE1-202ENST00000561960 OR5M9Q8NGP3 310 aa10.97□□□□□ -0.65
NSMCE1-202ENST00000561960 MAGEC3Q8TD91 643 aa10.97□□□□□ -0.65
NSMCE1-202ENST00000561960 DEFB127Q9H1M4 99 aa10.97□□□□□ -0.65
NSMCE1-202ENST00000561960 RHBGQ9H310 441 aa10.97□□□□□ -0.65
NSMCE1-202ENST00000561960 LIN28AQ9H9Z2 209 aaKnown RBP10.97□□□□□ -0.65
NSMCE1-202ENST00000561960 C19orf25Q9UFG5 118 aaPredicted RBP10.97□□□□□ -0.65
NSMCE1-202ENST00000561960 RNF6Q9Y252 685 aa10.97□□□□□ -0.65
NSMCE1-202ENST00000561960 CAPN6Q9Y6Q1 641 aa10.97□□□□□ -0.65
NSMCE1-202ENST00000561960 ABCA4P78363 2273 aa10.96□□□□□ -0.65
NSMCE1-202ENST00000561960 CTAGE15A4D2H0 777 aa10.96□□□□□ -0.65
NSMCE1-202ENST00000561960 FAM166BA8MTA8 275 aa10.96□□□□□ -0.65
NSMCE1-202ENST00000561960 E9PLN8 166 aa10.96□□□□□ -0.65
NSMCE1-202ENST00000561960 KPNA5O15131 536 aa10.96□□□□□ -0.65
NSMCE1-202ENST00000561960 NME2P1O60361 137 aa10.96□□□□□ -0.65
NSMCE1-202ENST00000561960 NSA2O95478 260 aaKnown RBP10.96□□□□□ -0.65
NSMCE1-202ENST00000561960 CATP04040 527 aaKnown RBP10.96□□□□□ -0.65
NSMCE1-202ENST00000561960 CDH1P12830 882 aa10.96□□□□□ -0.65
NSMCE1-202ENST00000561960 CD99P14209 185 aa10.96□□□□□ -0.65
NSMCE1-202ENST00000561960 PKMP14618 531 aaKnown RBP10.96□□□□□ -0.65
NSMCE1-202ENST00000561960 CAPN3P20807 821 aa10.96□□□□□ -0.65
NSMCE1-202ENST00000561960 MAOAP21397 527 aa10.96□□□□□ -0.65
NSMCE1-202ENST00000561960 NME2P22392 152 aa10.96□□□□□ -0.65
NSMCE1-202ENST00000561960 RPS3P23396 243 aaKnown RBP eCLIP10.96□□□□□ -0.651e-7■■■■■ 50.6
NSMCE1-202ENST00000561960 DNAJA1P31689 397 aaKnown RBP10.96□□□□□ -0.65
NSMCE1-202ENST00000561960 PTGS2P35354 604 aa10.96□□□□□ -0.65
NSMCE1-202ENST00000561960 HNF4AP41235 474 aa10.96□□□□□ -0.65
NSMCE1-202ENST00000561960 VPS41P49754 854 aa10.96□□□□□ -0.65
NSMCE1-202ENST00000561960 IST1P53990 364 aa10.96□□□□□ -0.65
NSMCE1-202ENST00000561960 SLC26A5P58743 744 aa10.96□□□□□ -0.65
NSMCE1-202ENST00000561960 TBPL1P62380 186 aa10.96□□□□□ -0.65
NSMCE1-202ENST00000561960 BTG2P78543 158 aa10.96□□□□□ -0.65
NSMCE1-202ENST00000561960 GBX1Q14549 363 aa10.96□□□□□ -0.65
NSMCE1-202ENST00000561960 CTAGE6Q86UF2 777 aa10.96□□□□□ -0.65
NSMCE1-202ENST00000561960 DENND6AQ8IWF6 608 aa10.96□□□□□ -0.65
NSMCE1-202ENST00000561960 CPNE9Q8IYJ1 553 aa10.96□□□□□ -0.65
NSMCE1-202ENST00000561960 SLC5A8Q8N695 610 aa10.96□□□□□ -0.65
NSMCE1-202ENST00000561960 PRELID2Q8N945 189 aa10.96□□□□□ -0.65
NSMCE1-202ENST00000561960 OR52N2Q8NGI0 321 aa10.96□□□□□ -0.65
NSMCE1-202ENST00000561960 M1APQ8TC57 530 aa10.96□□□□□ -0.65
NSMCE1-202ENST00000561960 VKORC1Q9BQB6 163 aa10.96□□□□□ -0.65
NSMCE1-202ENST00000561960 ATG10Q9H0Y0 220 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms