RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 FGFR1OPO95684 399 aaKnown RBP4.97□□□□□ -1.61
HERC1-213ENST00000561359 TSPAN15O95858 294 aa4.97□□□□□ -1.61
HERC1-213ENST00000561359 HLA-DQB2P05538 268 aa4.97□□□□□ -1.61
HERC1-213ENST00000561359 C8orf89P0DMQ9 161 aa4.97□□□□□ -1.61
HERC1-213ENST00000561359 BMP5P22003 454 aa4.97□□□□□ -1.61
HERC1-213ENST00000561359 PSMA2P25787 234 aa4.97□□□□□ -1.61
HERC1-213ENST00000561359 PPP1R2P41236 205 aa4.97□□□□□ -1.61
HERC1-213ENST00000561359 CYB561P49447 251 aa4.97□□□□□ -1.61
HERC1-213ENST00000561359 EFNA3P52797 238 aa4.97□□□□□ -1.61
HERC1-213ENST00000561359 NR1H2P55055 460 aa4.97□□□□□ -1.61
HERC1-213ENST00000561359 GSCP56915 257 aaPredicted RBP4.97□□□□□ -1.61
HERC1-213ENST00000561359 VSX2P58304 361 aaPredicted RBP4.97□□□□□ -1.61
HERC1-213ENST00000561359 TAS2R50P59544 299 aa4.97□□□□□ -1.61
HERC1-213ENST00000561359 FMO1Q01740 532 aa4.97□□□□□ -1.61
HERC1-213ENST00000561359 CDR2Q01850 454 aa4.97□□□□□ -1.61
HERC1-213ENST00000561359 OGDHQ02218 1023 aa4.97□□□□□ -1.61
HERC1-213ENST00000561359 PTP4A2Q12974 167 aa4.97□□□□□ -1.61
HERC1-213ENST00000561359 TNK1Q13470 666 aa4.97□□□□□ -1.61
HERC1-213ENST00000561359 BECN1Q14457 450 aa4.97□□□□□ -1.61
HERC1-213ENST00000561359 ZC3H12BQ5HYM0 836 aaKnown RBP4.97□□□□□ -1.61
HERC1-213ENST00000561359 WASHC2DQ5SRD0 308 aa4.97□□□□□ -1.61
HERC1-213ENST00000561359 HIST2H2BDQ6DRA6 164 aa4.97□□□□□ -1.61
HERC1-213ENST00000561359 H3F3CQ6NXT2 135 aa4.97□□□□□ -1.61
HERC1-213ENST00000561359 ZNF449Q6P9G9 518 aa4.97□□□□□ -1.61
HERC1-213ENST00000561359 ZNF677Q86XU0 584 aa4.97□□□□□ -1.61
HERC1-213ENST00000561359 LRRC49Q8IUZ0 686 aa4.97□□□□□ -1.61
HERC1-213ENST00000561359 SLC5A8Q8N695 610 aa4.97□□□□□ -1.61
HERC1-213ENST00000561359 OR52N2Q8NGI0 321 aa4.97□□□□□ -1.61
HERC1-213ENST00000561359 HM13Q8TCT9 377 aa4.97□□□□□ -1.61
HERC1-213ENST00000561359 CREB3L4Q8TEY5 395 aa4.97□□□□□ -1.61
HERC1-213ENST00000561359 ROBO4Q8WZ75 1007 aa4.97□□□□□ -1.61
HERC1-213ENST00000561359 TFGQ92734 400 aaPredicted RBP4.97□□□□□ -1.61
HERC1-213ENST00000561359 PEBP4Q96S96 227 aa4.97□□□□□ -1.61
HERC1-213ENST00000561359 NPAS2Q99743 824 aa4.97□□□□□ -1.61
HERC1-213ENST00000561359 PRDM14Q9GZV8 571 aa4.97□□□□□ -1.61
HERC1-213ENST00000561359 THAP2Q9H0W7 228 aa4.97□□□□□ -1.61
HERC1-213ENST00000561359 GOLPH3LQ9H4A5 285 aa4.97□□□□□ -1.61
HERC1-213ENST00000561359 C14orf105Q9NVL8 296 aa4.97□□□□□ -1.61
HERC1-213ENST00000561359 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.97□□□□□ -1.61
HERC1-213ENST00000561359 OR6C2Q9NZP2 312 aa4.97□□□□□ -1.61
HERC1-213ENST00000561359 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.97□□□□□ -1.61
HERC1-213ENST00000561359 STOX2Q9P2F5 926 aaPredicted RBP4.97□□□□□ -1.61
HERC1-213ENST00000561359 MTRF1LQ9UGC7 380 aaKnown RBP4.97□□□□□ -1.61
HERC1-213ENST00000561359 EIF3LQ9Y262 564 aaKnown RBP4.97□□□□□ -1.61
HERC1-213ENST00000561359 TDRKHQ9Y2W6 561 aaKnown RBP4.97□□□□□ -1.61
HERC1-213ENST00000561359 ZNF281Q9Y2X9 895 aa4.97□□□□□ -1.61
HERC1-213ENST00000561359 KLF13Q9Y2Y9 288 aaPredicted RBP4.97□□□□□ -1.61
HERC1-213ENST00000561359 FAM215AQ9Y5M1 114 aa4.97□□□□□ -1.61
HERC1-213ENST00000561359 PHF3Q92576 2039 aaKnown RBP4.97□□□□□ -1.61
HERC1-213ENST00000561359 GLYATL1P3A0A0U1RQE8 302 aa4.96□□□□□ -1.62
HERC1-213ENST00000561359 FAM237AA0A1B0GTK4 181 aa4.96□□□□□ -1.62
HERC1-213ENST00000561359 A8MV72 311 aaPredicted RBP4.96□□□□□ -1.62
HERC1-213ENST00000561359 NDC80O14777 642 aa4.96□□□□□ -1.62
HERC1-213ENST00000561359 BCKDKO14874 412 aa4.96□□□□□ -1.62
HERC1-213ENST00000561359 MATN3O15232 486 aa4.96□□□□□ -1.62
HERC1-213ENST00000561359 CD5LO43866 347 aa4.96□□□□□ -1.62
HERC1-213ENST00000561359 PEX1O43933 1283 aa4.96□□□□□ -1.62
HERC1-213ENST00000561359 RNF8O76064 485 aa4.96□□□□□ -1.62
HERC1-213ENST00000561359 GFPT2O94808 682 aa4.96□□□□□ -1.62
HERC1-213ENST00000561359 EIF2S1P05198 315 aaKnown RBP4.96□□□□□ -1.62
HERC1-213ENST00000561359 MMP2P08253 660 aa4.96□□□□□ -1.62
HERC1-213ENST00000561359 ZSCAN22P10073 491 aaPredicted RBP4.96□□□□□ -1.62
HERC1-213ENST00000561359 ERVK-10P10266 1014 aa4.96□□□□□ -1.62
HERC1-213ENST00000561359 FPR1P21462 350 aa4.96□□□□□ -1.62
HERC1-213ENST00000561359 PDHA2P29803 388 aa4.96□□□□□ -1.62
HERC1-213ENST00000561359 MIPP30301 263 aa4.96□□□□□ -1.62
HERC1-213ENST00000561359 PRKCIP41743 596 aa4.96□□□□□ -1.62
HERC1-213ENST00000561359 NR0B1P51843 470 aaKnown RBP4.96□□□□□ -1.62
HERC1-213ENST00000561359 ITGA9Q13797 1035 aa4.96□□□□□ -1.62
HERC1-213ENST00000561359 BOP1Q14137 746 aaKnown RBP4.96□□□□□ -1.62
HERC1-213ENST00000561359 KIR2DS3Q14952 304 aa4.96□□□□□ -1.62
HERC1-213ENST00000561359 MUM1Q2TAK8 710 aa4.96□□□□□ -1.62
HERC1-213ENST00000561359 BCL7AQ4VC05 210 aa4.96□□□□□ -1.62
HERC1-213ENST00000561359 FIGNQ5HY92 759 aa4.96□□□□□ -1.62
HERC1-213ENST00000561359 MFSD4BQ5TF39 518 aa4.96□□□□□ -1.62
HERC1-213ENST00000561359 ZDHHC20Q5W0Z9 365 aa4.96□□□□□ -1.62
HERC1-213ENST00000561359 RTL6Q6ICC9 239 aa4.96□□□□□ -1.62
HERC1-213ENST00000561359 CCDC70Q6NSX1 233 aa4.96□□□□□ -1.62
HERC1-213ENST00000561359 FIGLAQ6QHK4 219 aa4.96□□□□□ -1.62
HERC1-213ENST00000561359 TMEM205Q6UW68 189 aa4.96□□□□□ -1.62
HERC1-213ENST00000561359 CPEB2Q7Z5Q1 589 aaKnown RBP4.96□□□□□ -1.62
HERC1-213ENST00000561359 POLNQ7Z5Q5 900 aa4.96□□□□□ -1.62
HERC1-213ENST00000561359 PSTKQ8IV42 348 aaKnown RBP4.96□□□□□ -1.62
HERC1-213ENST00000561359 RELL2Q8NC24 303 aaPredicted RBP4.96□□□□□ -1.62
HERC1-213ENST00000561359 OR5AR1Q8NGP9 310 aa4.96□□□□□ -1.62
HERC1-213ENST00000561359 FLVCR1-AS1Q8TAF5 88 aa4.96□□□□□ -1.62
HERC1-213ENST00000561359 MAML1Q92585 1016 aa4.96□□□□□ -1.62
HERC1-213ENST00000561359 DCUN1D1Q96GG9 259 aa4.96□□□□□ -1.62
HERC1-213ENST00000561359 DHRS1Q96LJ7 313 aa4.96□□□□□ -1.62
HERC1-213ENST00000561359 CSPG4P5Q96PW8 444 aa4.96□□□□□ -1.62
HERC1-213ENST00000561359 SMC6Q96SB8 1091 aa4.96□□□□□ -1.62
HERC1-213ENST00000561359 SH3GL2Q99962 352 aa4.96□□□□□ -1.62
HERC1-213ENST00000561359 ZFYVE21Q9BQ24 234 aa4.96□□□□□ -1.62
HERC1-213ENST00000561359 BEX2Q9BXY8 128 aa4.96□□□□□ -1.62
HERC1-213ENST00000561359 OR52A5Q9H2C5 316 aa4.96□□□□□ -1.62
HERC1-213ENST00000561359 CDCP1Q9H5V8 836 aa4.96□□□□□ -1.62
HERC1-213ENST00000561359 COG4Q9H9E3 785 aa4.96□□□□□ -1.62
HERC1-213ENST00000561359 UBTD1Q9HAC8 227 aa4.96□□□□□ -1.62
HERC1-213ENST00000561359 INTS7Q9NVH2 962 aaKnown RBP4.96□□□□□ -1.62
HERC1-213ENST00000561359 AMACRQ9UHK6 382 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms