RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 NT5CQ8TCD5 201 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 ZNF483Q8TF39 744 aaPredicted RBP9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 SNRNP27Q8WVK2 155 aaKnown RBP9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 SLC13A3Q8WWT9 602 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 DOCK10Q96BY6 2186 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 CLIP3Q96DZ5 547 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 PHF21BQ96EK2 531 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 C10orf90Q96M02 699 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 GBP5Q96PP8 586 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 SMC6Q96SB8 1091 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 EFHD1Q9BUP0 239 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 NLNQ9BYT8 704 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 IPPKQ9H8X2 491 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 ZBTB26Q9HCK0 441 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 CUTCQ9NTM9 273 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 ARGLU1Q9NWB6 273 aaPredicted RBP9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 PSD3Q9NYI0 1048 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 MED13Q9UHV7 2174 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 MID2Q9UJV3 735 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 ZNF490Q9ULM2 529 aaPredicted RBP9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 RUVBL1Q9Y265 456 aaKnown RBP9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 RAXQ9Y2V3 346 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 SLC22A7Q9Y694 548 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 LOC101059948A0A1B0GTJ6 334 aa9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 TEX51A0A1B0GUA7 166 aa9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 SRRM3A6NNA2 597 aaPredicted RBP9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 C21orf140B9A014 251 aa9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 H0YIV9 168 aa9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 OR7A17O14581 309 aa9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 P2RX6O15547 441 aa9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 KLK10O43240 276 aa9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 CLEC3AO75596 197 aa9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 ALBP02768 609 aa9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 SERPINA6P08185 405 aa9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 SLC35G6P0C7Q6 338 aa9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 SMIM10L1P0DMW3 83 aa9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 PIM1P11309 404 aaPredicted RBP9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 AGXTP21549 392 aa9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 VARSP26640 1264 aaKnown RBP9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 SERPINB1P30740 379 aa9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 UCNP55089 124 aa9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 DCDP81605 110 aaKnown RBP9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 TLE3Q04726 772 aa9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 HYAL2Q12891 473 aa9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 SLBPQ14493 270 aaKnown RBP eCLIP9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 HIST2H2ACQ16777 129 aaPredicted RBP9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 NDUFA9Q16795 377 aa9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 HKDC1Q2TB90 917 aa9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 ADPRMQ3LIE5 342 aa9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 GGTA1PQ4G0N0 100 aa9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 UNC50Q53HI1 259 aa9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 XKR6Q5GH73 641 aa9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 HIST2H2AA3Q6FI13 130 aa9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 TMEM214Q6NUQ4 689 aaKnown RBP9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 MRPL14Q6P1L8 145 aaKnown RBP9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 LRRC69Q6ZNQ3 347 aa9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 TTLL10Q6ZVT0 673 aa9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 GOLGA7Q7Z5G4 137 aa9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 ASPGQ86U10 573 aa9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 AFAP1L2Q8N4X5 818 aa9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 IL22RA1Q8N6P7 574 aa9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 CREB3L4Q8TEY5 395 aa9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 UBE2E3Q969T4 207 aa9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 SMIM10Q96HG1 83 aa9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 MAGEB10Q96LZ2 347 aaPredicted RBP9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 CCNL2Q96S94 520 aaPredicted RBP9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 C17orf62Q9BQA9 187 aa9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 GPR87Q9BY21 358 aa9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 SLC7A5P2Q9GIP4 190 aa9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 SLC6A16Q9GZN6 736 aa9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 SLC26A1Q9H2B4 701 aa9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 VIPAS39Q9H9C1 493 aa9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 AKIRIN1Q9H9L7 192 aaPredicted RBP9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 STARD5Q9NSY2 213 aa9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 TXLNGQ9NUQ3 528 aa9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 OXSMQ9NWU1 459 aa9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 DHCR7Q9UBM7 475 aaKnown RBP9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 ADGRE2Q9UHX3 823 aa9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 PPT2Q9UMR5 302 aa9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 CDC14AQ9UNH5 594 aa9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 ANGPTL3Q9Y5C1 460 aa9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 PCDHGA11Q9Y5H2 935 aa9.17□□□□□ -0.94
RABGGTA-221ENST00000561055 IGLV3-12A0A075B6K2 115 aa9.16□□□□□ -0.94
RABGGTA-221ENST00000561055 ANKDD1BA6NHY2 528 aa9.16□□□□□ -0.94
RABGGTA-221ENST00000561055 H0YIG0 161 aa9.16□□□□□ -0.94
RABGGTA-221ENST00000561055 H3BQF6 201 aa9.16□□□□□ -0.94
RABGGTA-221ENST00000561055 AGPSO00116 658 aa9.16□□□□□ -0.94
RABGGTA-221ENST00000561055 PRPF4O43172 522 aaKnown RBP eCLIP9.16□□□□□ -0.94
RABGGTA-221ENST00000561055 EFSO43281 561 aa9.16□□□□□ -0.94
RABGGTA-221ENST00000561055 FOXS1O43638 330 aa9.16□□□□□ -0.94
RABGGTA-221ENST00000561055 MED26O95402 600 aa9.16□□□□□ -0.94
RABGGTA-221ENST00000561055 NSA2O95478 260 aaKnown RBP9.16□□□□□ -0.94
RABGGTA-221ENST00000561055 CLDN9O95484 217 aa9.16□□□□□ -0.94
RABGGTA-221ENST00000561055 TBX6O95947 436 aaPredicted RBP9.16□□□□□ -0.94
RABGGTA-221ENST00000561055 EIF2S1P05198 315 aaKnown RBP9.16□□□□□ -0.94
RABGGTA-221ENST00000561055 MYZAPP0CAP1 466 aa9.16□□□□□ -0.94
RABGGTA-221ENST00000561055 MYL2P10916 166 aa9.16□□□□□ -0.94
RABGGTA-221ENST00000561055 CPA3P15088 417 aa9.16□□□□□ -0.94
RABGGTA-221ENST00000561055 CREB1P16220 341 aa9.16□□□□□ -0.94
RABGGTA-221ENST00000561055 TCN2P20062 427 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms