RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 GRK3P35626 688 aa15.32■□□□□ 0.04
SNX1-213ENST00000561026 IL2P60568 153 aa15.32■□□□□ 0.04
SNX1-213ENST00000561026 BBS9Q3SYG4 887 aa15.32■□□□□ 0.04
SNX1-213ENST00000561026 TEDDM1Q5T9Z0 273 aa15.32■□□□□ 0.04
SNX1-213ENST00000561026 MFSD4BQ5TF39 518 aa15.32■□□□□ 0.04
SNX1-213ENST00000561026 ABHD17BQ5VST6 288 aa15.32■□□□□ 0.04
SNX1-213ENST00000561026 ZNF787Q6DD87 383 aa15.32■□□□□ 0.04
SNX1-213ENST00000561026 PLAG1Q6DJT9 500 aa15.32■□□□□ 0.04
SNX1-213ENST00000561026 HIBCHQ6NVY1 386 aaPredicted RBP15.32■□□□□ 0.04
SNX1-213ENST00000561026 LANCL3Q6ZV70 420 aa15.32■□□□□ 0.04
SNX1-213ENST00000561026 CPEB2Q7Z5Q1 589 aaKnown RBP15.32■□□□□ 0.04
SNX1-213ENST00000561026 SLC26A11Q86WA9 606 aa15.32■□□□□ 0.04
SNX1-213ENST00000561026 PDSS2Q86YH6 399 aa15.32■□□□□ 0.04
SNX1-213ENST00000561026 LURAP1LQ8IV03 231 aa15.32■□□□□ 0.04
SNX1-213ENST00000561026 ABHD11Q8NFV4 315 aa15.32■□□□□ 0.04
SNX1-213ENST00000561026 HAUS8Q9BT25 410 aa15.32■□□□□ 0.04
SNX1-213ENST00000561026 ARL15Q9NXU5 204 aa15.32■□□□□ 0.04
SNX1-213ENST00000561026 TEKT2Q9UIF3 430 aa15.32■□□□□ 0.04
SNX1-213ENST00000561026 VWA7Q9Y334 891 aa15.32■□□□□ 0.04
SNX1-213ENST00000561026 SLC22A7Q9Y694 548 aa15.32■□□□□ 0.04
SNX1-213ENST00000561026 CACNA1DQ01668 2161 aa15.31■□□□□ 0.04
SNX1-213ENST00000561026 IGHV3-20A0A0C4DH32 117 aa15.31■□□□□ 0.04
SNX1-213ENST00000561026 OR2W5A6NFC9 320 aa15.31■□□□□ 0.04
SNX1-213ENST00000561026 SEC24DO94855 1032 aaPredicted RBP15.31■□□□□ 0.04
SNX1-213ENST00000561026 TDGF1P3P51864 188 aa15.31■□□□□ 0.04
SNX1-213ENST00000561026 AP1S2P56377 157 aa15.31■□□□□ 0.04
SNX1-213ENST00000561026 PER3P56645 1201 aa15.31■□□□□ 0.04
SNX1-213ENST00000561026 PDAP1Q13442 181 aaKnown RBP15.31■□□□□ 0.04
SNX1-213ENST00000561026 DUPD1Q68J44 220 aa15.31■□□□□ 0.04
SNX1-213ENST00000561026 MFSD9Q8NBP5 474 aa15.31■□□□□ 0.04
SNX1-213ENST00000561026 OR4K1Q8NGD4 311 aa15.31■□□□□ 0.04
SNX1-213ENST00000561026 OR56A3Q8NH54 315 aa15.31■□□□□ 0.04
SNX1-213ENST00000561026 ZCCHC10Q8TBK6 192 aa15.31■□□□□ 0.04
SNX1-213ENST00000561026 NR4A3Q92570 626 aa15.31■□□□□ 0.04
SNX1-213ENST00000561026 PYCR2Q96C36 320 aa15.31■□□□□ 0.04
SNX1-213ENST00000561026 SARGQ9BW04 601 aa15.31■□□□□ 0.04
SNX1-213ENST00000561026 PPANQ9NQ55 473 aaKnown RBP15.31■□□□□ 0.04
SNX1-213ENST00000561026 SLC17A6Q9P2U8 582 aa15.31■□□□□ 0.04
SNX1-213ENST00000561026 C19orf25Q9UFG5 118 aaPredicted RBP15.31■□□□□ 0.04
SNX1-213ENST00000561026 NAALAD2Q9Y3Q0 740 aa15.31■□□□□ 0.04
SNX1-213ENST00000561026 A0A1B0GUH1 482 aa15.3■□□□□ 0.04
SNX1-213ENST00000561026 OR5H15A6NDH6 313 aa15.3■□□□□ 0.04
SNX1-213ENST00000561026 RDH16O75452 317 aa15.3■□□□□ 0.04
SNX1-213ENST00000561026 SLC35G6P0C7Q6 338 aa15.3■□□□□ 0.04
SNX1-213ENST00000561026 MYBL2P10244 700 aa15.3■□□□□ 0.04
SNX1-213ENST00000561026 TCP1P17987 556 aaKnown RBP15.3■□□□□ 0.04
SNX1-213ENST00000561026 ELK3P41970 407 aa15.3■□□□□ 0.04
SNX1-213ENST00000561026 AGTR2P50052 363 aa15.3■□□□□ 0.04
SNX1-213ENST00000561026 CCR8P51685 355 aa15.3■□□□□ 0.04
SNX1-213ENST00000561026 PGGT1BP53609 377 aa15.3■□□□□ 0.04
SNX1-213ENST00000561026 ZNF33BQ06732 778 aa15.3■□□□□ 0.04
SNX1-213ENST00000561026 MORF4L2Q15014 288 aa15.3■□□□□ 0.04
SNX1-213ENST00000561026 BTBD16Q32M84 506 aa15.3■□□□□ 0.04
SNX1-213ENST00000561026 HP1BP3Q5SSJ5 553 aaPredicted RBP15.3■□□□□ 0.04
SNX1-213ENST00000561026 HECTD2Q5U5R9 776 aa15.3■□□□□ 0.04
SNX1-213ENST00000561026 ANKRD37Q7Z713 158 aa15.3■□□□□ 0.04
SNX1-213ENST00000561026 PDIK1LQ8N165 341 aa15.3■□□□□ 0.04
SNX1-213ENST00000561026 GPATCH11Q8N954 259 aa15.3■□□□□ 0.04
SNX1-213ENST00000561026 SNF8Q96H20 258 aa15.3■□□□□ 0.04
SNX1-213ENST00000561026 OR4K3Q96R72 315 aa15.3■□□□□ 0.04
SNX1-213ENST00000561026 TRIM54Q9BYV2 358 aa15.3■□□□□ 0.04
SNX1-213ENST00000561026 TRMT1Q9NXH9 659 aaKnown RBP15.3■□□□□ 0.04
SNX1-213ENST00000561026 CORO1CQ9ULV4 474 aaPredicted RBP15.3■□□□□ 0.04
SNX1-213ENST00000561026 MYO9AB2RTY4 2548 aa15.29■□□□□ 0.04
SNX1-213ENST00000561026 PABPN1LA6NDY0 278 aaKnown RBP15.29■□□□□ 0.04
SNX1-213ENST00000561026 A8MUI8 341 aa15.29■□□□□ 0.04
SNX1-213ENST00000561026 OR1F1O43749 312 aa15.29■□□□□ 0.04
SNX1-213ENST00000561026 PRAMEF2O60811 474 aa15.29■□□□□ 0.04
SNX1-213ENST00000561026 RASAL1O95294 804 aa15.29■□□□□ 0.04
SNX1-213ENST00000561026 IL10P22301 178 aa15.29■□□□□ 0.04
SNX1-213ENST00000561026 PWP1Q13610 501 aa15.29■□□□□ 0.04
SNX1-213ENST00000561026 HERC3Q15034 1050 aa15.29■□□□□ 0.04
SNX1-213ENST00000561026 H3F3CQ6NXT2 135 aa15.29■□□□□ 0.04
SNX1-213ENST00000561026 TRMT10BQ6PF06 316 aaKnown RBP15.29■□□□□ 0.04
SNX1-213ENST00000561026 AFAP1L2Q8N4X5 818 aa15.29■□□□□ 0.04
SNX1-213ENST00000561026 PLPP5Q8NEB5 264 aa15.29■□□□□ 0.04
SNX1-213ENST00000561026 SUN3Q8TAQ9 357 aa15.29■□□□□ 0.04
SNX1-213ENST00000561026 ATL1Q8WXF7 558 aa15.29■□□□□ 0.04
SNX1-213ENST00000561026 FBXL8Q96CD0 374 aa15.29■□□□□ 0.04
SNX1-213ENST00000561026 MOCOSQ96EN8 888 aa15.29■□□□□ 0.04
SNX1-213ENST00000561026 PWWP2AQ96N64 755 aa15.29■□□□□ 0.04
SNX1-213ENST00000561026 OR1F2PQ96R84 312 aa15.29■□□□□ 0.04
SNX1-213ENST00000561026 WDR83Q9BRX9 315 aaKnown RBP15.29■□□□□ 0.04
SNX1-213ENST00000561026 SCN3AQ9NY46 2000 aa15.29■□□□□ 0.04
SNX1-213ENST00000561026 CREBBPQ92793 2442 aa15.29■□□□□ 0.04
SNX1-213ENST00000561026 TRBC2A0A5B9 178 aa15.28■□□□□ 0.04
SNX1-213ENST00000561026 NDUFS4O43181 175 aa15.28■□□□□ 0.04
SNX1-213ENST00000561026 ZG16O60844 167 aa15.28■□□□□ 0.04
SNX1-213ENST00000561026 CRYABP02511 175 aaKnown RBP15.28■□□□□ 0.04
SNX1-213ENST00000561026 ENO2P09104 434 aaPredicted RBP15.28■□□□□ 0.04
SNX1-213ENST00000561026 KCNK10P57789 538 aa15.28■□□□□ 0.04
SNX1-213ENST00000561026 MEF2AQ02078 507 aaPredicted RBP15.28■□□□□ 0.04
SNX1-213ENST00000561026 RHAGQ02094 409 aa15.28■□□□□ 0.04
SNX1-213ENST00000561026 ABRAXAS2Q15018 415 aa15.28■□□□□ 0.04
SNX1-213ENST00000561026 ZRSR2Q15696 482 aaKnown RBP15.28■□□□□ 0.04
SNX1-213ENST00000561026 NSDHLQ15738 373 aa15.28■□□□□ 0.04
SNX1-213ENST00000561026 EXT1Q16394 746 aa15.28■□□□□ 0.04
SNX1-213ENST00000561026 ACER2Q5QJU3 275 aa15.28■□□□□ 0.04
SNX1-213ENST00000561026 STEAP4Q687X5 459 aa15.28■□□□□ 0.04
SNX1-213ENST00000561026 FAM45BPQ6NSW5 357 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms