RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 KLHL18O94889 574 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 RASGRP1O95267 797 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 TNFP01375 233 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 GSTM2P28161 218 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 HPCAL1P37235 193 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 GRIA3P42263 894 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 CYP4F3Q08477 520 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 DUOXA1Q1HG43 343 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 MUM1Q2TAK8 710 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 OGFRL1Q5TC84 451 aaPredicted RBP12.38□□□□□ -0.43
SNX1-211ENST00000560829 KHDRBS2Q5VWX1 349 aaKnown RBP12.38□□□□□ -0.43
SNX1-211ENST00000560829 PROSER1Q86XN7 944 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 GJD3Q8N144 294 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 LILRA2Q8N149 483 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 TMEM132CQ8N3T6 1108 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 TTLQ8NG68 377 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 OR7A2PQ8NGA2 310 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 GPBAR1Q8TDU6 330 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 NELL1Q92832 810 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 GFM2Q969S9 779 aaKnown RBP12.38□□□□□ -0.43
SNX1-211ENST00000560829 PRPF18Q99633 342 aaKnown RBP12.38□□□□□ -0.43
SNX1-211ENST00000560829 CPPED1Q9BRF8 314 aaPredicted RBP12.38□□□□□ -0.43
SNX1-211ENST00000560829 VCX3BQ9H321 246 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 MYNNQ9NPC7 610 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 CCM2LQ9NUG4 571 aaPredicted RBP12.38□□□□□ -0.43
SNX1-211ENST00000560829 AHSPQ9NZD4 102 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.38□□□□□ -0.43
SNX1-211ENST00000560829 BTNL2Q9UIR0 455 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 MAGEL2Q9UJ55 1249 aa12.38□□□□□ -0.43
SNX1-211ENST00000560829 EXO1Q9UQ84 846 aaKnown RBP12.38□□□□□ -0.43
SNX1-211ENST00000560829 PRUNE2Q8WUY3 3088 aa12.37□□□□□ -0.43
SNX1-211ENST00000560829 TRBC2A0A5B9 178 aa12.37□□□□□ -0.43
SNX1-211ENST00000560829 GABRR3A8MPY1 467 aa12.37□□□□□ -0.43
SNX1-211ENST00000560829 RFXANKO14593 260 aa12.37□□□□□ -0.43
SNX1-211ENST00000560829 CCNDBP1O95273 360 aa12.37□□□□□ -0.43
SNX1-211ENST00000560829 PIM1P11309 404 aaPredicted RBP12.37□□□□□ -0.43
SNX1-211ENST00000560829 ACADSP16219 412 aa12.37□□□□□ -0.43
SNX1-211ENST00000560829 HRH2P25021 359 aa12.37□□□□□ -0.43
SNX1-211ENST00000560829 PEBP1P30086 187 aaKnown RBP12.37□□□□□ -0.43
SNX1-211ENST00000560829 RPL3P39023 403 aaKnown RBP12.37□□□□□ -0.43
SNX1-211ENST00000560829 SLC19A1P41440 591 aa12.37□□□□□ -0.43
SNX1-211ENST00000560829 PLIN5Q00G26 463 aa12.37□□□□□ -0.43
SNX1-211ENST00000560829 LRRC74AQ0VAA2 488 aa12.37□□□□□ -0.43
SNX1-211ENST00000560829 ILF3Q12906 894 aaKnown RBP eCLIP12.37□□□□□ -0.437e-7■■■■□ 23.2
SNX1-211ENST00000560829 PDE7AQ13946 482 aa12.37□□□□□ -0.43
SNX1-211ENST00000560829 HKDC1Q2TB90 917 aa12.37□□□□□ -0.43
SNX1-211ENST00000560829 SLC30A9Q6PML9 568 aa12.37□□□□□ -0.43
SNX1-211ENST00000560829 IKBIPQ70UQ0 350 aa12.37□□□□□ -0.43
SNX1-211ENST00000560829 AMIGO1Q86WK6 493 aa12.37□□□□□ -0.43
SNX1-211ENST00000560829 IFNEQ86WN2 208 aa12.37□□□□□ -0.43
SNX1-211ENST00000560829 KBTBD2Q8IY47 623 aa12.37□□□□□ -0.43
SNX1-211ENST00000560829 PHACTR4Q8IZ21 702 aa12.37□□□□□ -0.43
SNX1-211ENST00000560829 OR2L3Q8NG85 312 aa12.37□□□□□ -0.43
SNX1-211ENST00000560829 WDR48Q8TAF3 677 aa12.37□□□□□ -0.43
SNX1-211ENST00000560829 ZFPM2Q8WW38 1151 aa12.37□□□□□ -0.43
SNX1-211ENST00000560829 MTERF3Q96E29 417 aa12.37□□□□□ -0.43
SNX1-211ENST00000560829 GBP5Q96PP8 586 aa12.37□□□□□ -0.43
SNX1-211ENST00000560829 ZNF184Q99676 751 aaPredicted RBP12.37□□□□□ -0.43
SNX1-211ENST00000560829 ECSITQ9BQ95 431 aa12.37□□□□□ -0.43
SNX1-211ENST00000560829 INPP5KQ9BT40 448 aa12.37□□□□□ -0.43
SNX1-211ENST00000560829 DUSP26Q9BV47 211 aa12.37□□□□□ -0.43
SNX1-211ENST00000560829 PCED1AQ9H1Q7 454 aa12.37□□□□□ -0.43
SNX1-211ENST00000560829 IKZF5Q9H5V7 419 aa12.37□□□□□ -0.43
SNX1-211ENST00000560829 REEP4Q9H6H4 257 aa12.37□□□□□ -0.43
SNX1-211ENST00000560829 KAT8Q9H7Z6 458 aaKnown RBP12.37□□□□□ -0.43
SNX1-211ENST00000560829 SLC6A13Q9NSD5 602 aa12.37□□□□□ -0.43
SNX1-211ENST00000560829 TMEM184CQ9NVA4 438 aa12.37□□□□□ -0.43
SNX1-211ENST00000560829 KLF15Q9UIH9 416 aa12.37□□□□□ -0.43
SNX1-211ENST00000560829 BTBD3Q9Y2F9 522 aa12.37□□□□□ -0.43
SNX1-211ENST00000560829 WBP11Q9Y2W2 641 aaKnown RBP12.37□□□□□ -0.43
SNX1-211ENST00000560829 GMEB1Q9Y692 573 aa12.37□□□□□ -0.43
SNX1-211ENST00000560829 TCRBV5S2A0A599 114 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 CLEC3AO75596 197 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 GPIP06744 558 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 THEGLP0DJG4 465 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 LAMP1P11279 417 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 CDKN2CP42773 168 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 OR4D2P58180 307 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 ZP2Q05996 745 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 EIF2B5Q13144 721 aaKnown RBP12.36□□□□□ -0.43
SNX1-211ENST00000560829 TAF11Q15544 211 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 TRIP10Q15642 601 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 GTDC1Q4AE62 458 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 CPTPQ5TA50 214 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 ANXA8L1Q5VT79 327 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 FAM71E1Q6IPT2 247 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 DNAJC14Q6Y2X3 702 aaPredicted RBP12.36□□□□□ -0.43
SNX1-211ENST00000560829 ANKRD46Q86W74 232 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 CALHM3Q86XJ0 350 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 SPPL2CQ8IUH8 684 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 TMEM102Q8N9M5 508 aaPredicted RBP12.36□□□□□ -0.43
SNX1-211ENST00000560829 TNIP2Q8NFZ5 429 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 C16orf78Q8WTQ4 265 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 LCN9Q8WX39 176 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 PHF12Q96QT6 1004 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 PKP2Q99959 881 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 EFHD1Q9BUP0 239 aa12.36□□□□□ -0.43
SNX1-211ENST00000560829 THUMPD3Q9BV44 507 aaKnown RBP12.36□□□□□ -0.43
SNX1-211ENST00000560829 ZNF717Q9BY31 904 aaPredicted RBP12.36□□□□□ -0.43
SNX1-211ENST00000560829 GSDMCQ9BYG8 508 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms