RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 REEP5Q00765 189 aa14.08□□□□□ -0.16
RABGGTA-211ENST00000559850 OCA2Q04671 838 aa14.08□□□□□ -0.16
RABGGTA-211ENST00000559850 RBBP5Q15291 538 aaKnown RBP14.08□□□□□ -0.16
RABGGTA-211ENST00000559850 RBBP7Q16576 425 aa14.08□□□□□ -0.16
RABGGTA-211ENST00000559850 NDUFA9Q16795 377 aa14.08□□□□□ -0.16
RABGGTA-211ENST00000559850 FAM153CQ494X1 144 aa14.08□□□□□ -0.16
RABGGTA-211ENST00000559850 DCAF10Q5QP82 559 aa14.08□□□□□ -0.16
RABGGTA-211ENST00000559850 GARNL3Q5VVW2 1013 aa14.08□□□□□ -0.16
RABGGTA-211ENST00000559850 TMEM214Q6NUQ4 689 aaKnown RBP14.08□□□□□ -0.16
RABGGTA-211ENST00000559850 CEP128Q6ZU80 1094 aa14.08□□□□□ -0.16
RABGGTA-211ENST00000559850 MED25Q71SY5 747 aa14.08□□□□□ -0.16
RABGGTA-211ENST00000559850 ISCA2Q86U28 154 aa14.08□□□□□ -0.16
RABGGTA-211ENST00000559850 PDSS2Q86YH6 399 aa14.08□□□□□ -0.16
RABGGTA-211ENST00000559850 IFT20Q8IY31 132 aa14.08□□□□□ -0.16
RABGGTA-211ENST00000559850 CENPLQ8N0S6 344 aaPredicted RBP14.08□□□□□ -0.16
RABGGTA-211ENST00000559850 SNX31Q8N9S9 440 aa14.08□□□□□ -0.16
RABGGTA-211ENST00000559850 CAMKVQ8NCB2 501 aa14.08□□□□□ -0.16
RABGGTA-211ENST00000559850 THAP11Q96EK4 314 aa14.08□□□□□ -0.16
RABGGTA-211ENST00000559850 FAM129AQ9BZQ8 928 aa14.08□□□□□ -0.16
RABGGTA-211ENST00000559850 FBXL4Q9UKA2 621 aa14.08□□□□□ -0.16
RABGGTA-211ENST00000559850 ACOT9Q9Y305 439 aa14.08□□□□□ -0.16
RABGGTA-211ENST00000559850 BSNQ9UPA5 3926 aa14.08□□□□□ -0.16
RABGGTA-211ENST00000559850 A0A096LPK6 155 aa14.07□□□□□ -0.16
RABGGTA-211ENST00000559850 OR2W5A6NFC9 320 aa14.07□□□□□ -0.16
RABGGTA-211ENST00000559850 SUPT3HB4E1H0 165 aa14.07□□□□□ -0.16
RABGGTA-211ENST00000559850 PRAMEF4O60810 478 aa14.07□□□□□ -0.16
RABGGTA-211ENST00000559850 DNAJB6O75190 326 aa14.07□□□□□ -0.16
RABGGTA-211ENST00000559850 RDH16O75452 317 aa14.07□□□□□ -0.16
RABGGTA-211ENST00000559850 SUPT3HO75486 399 aa14.07□□□□□ -0.16
RABGGTA-211ENST00000559850 ALDOAP04075 364 aaKnown RBP14.07□□□□□ -0.16
RABGGTA-211ENST00000559850 S100BP04271 92 aaPredicted RBP14.07□□□□□ -0.16
RABGGTA-211ENST00000559850 LTA4HP09960 611 aaKnown RBP14.07□□□□□ -0.16
RABGGTA-211ENST00000559850 SCTRP47872 440 aa14.07□□□□□ -0.16
RABGGTA-211ENST00000559850 AVPR1BP47901 424 aa14.07□□□□□ -0.16
RABGGTA-211ENST00000559850 AGTR2P50052 363 aa14.07□□□□□ -0.16
RABGGTA-211ENST00000559850 PGDP52209 483 aa14.07□□□□□ -0.16
RABGGTA-211ENST00000559850 OLR1P78380 273 aa14.07□□□□□ -0.16
RABGGTA-211ENST00000559850 CDC16Q13042 620 aa14.07□□□□□ -0.16
RABGGTA-211ENST00000559850 PRAMEF9Q5VWM5 478 aa14.07□□□□□ -0.16
RABGGTA-211ENST00000559850 ADNP2Q6IQ32 1131 aa14.07□□□□□ -0.16
RABGGTA-211ENST00000559850 TCTN3Q6NUS6 607 aa14.07□□□□□ -0.16
RABGGTA-211ENST00000559850 KIRREL2Q6UWL6 708 aa14.07□□□□□ -0.16
RABGGTA-211ENST00000559850 ZC3H7AQ8IWR0 971 aaKnown RBP14.07□□□□□ -0.16
RABGGTA-211ENST00000559850 KLHDC8AQ8IYD2 350 aa14.07□□□□□ -0.16
RABGGTA-211ENST00000559850 TMEM102Q8N9M5 508 aaPredicted RBP14.07□□□□□ -0.16
RABGGTA-211ENST00000559850 ANKRD53Q8N9V6 530 aa14.07□□□□□ -0.16
RABGGTA-211ENST00000559850 SLC44A1Q8WWI5 657 aa14.07□□□□□ -0.16
RABGGTA-211ENST00000559850 MVB12AQ96EY5 273 aa14.07□□□□□ -0.16
RABGGTA-211ENST00000559850 ATOH8Q96SQ7 321 aa14.07□□□□□ -0.16
RABGGTA-211ENST00000559850 PAFAH2Q99487 392 aa14.07□□□□□ -0.16
RABGGTA-211ENST00000559850 FUT8Q9BYC5 575 aa14.07□□□□□ -0.16
RABGGTA-211ENST00000559850 RBCK1Q9BYM8 510 aa14.07□□□□□ -0.16
RABGGTA-211ENST00000559850 VPS11Q9H270 941 aa14.07□□□□□ -0.16
RABGGTA-211ENST00000559850 KLHL31Q9H511 634 aa14.07□□□□□ -0.16
RABGGTA-211ENST00000559850 PELI2Q9HAT8 420 aa14.07□□□□□ -0.16
RABGGTA-211ENST00000559850 C3orf18Q9UK00 162 aa14.07□□□□□ -0.16
RABGGTA-211ENST00000559850 NXT1Q9UKK6 140 aaKnown RBP14.07□□□□□ -0.16
RABGGTA-211ENST00000559850 NAALAD2Q9Y3Q0 740 aa14.07□□□□□ -0.16
RABGGTA-211ENST00000559850 KCNE2Q9Y6J6 123 aa14.07□□□□□ -0.16
RABGGTA-211ENST00000559850 DOCK10Q96BY6 2186 aa14.07□□□□□ -0.16
RABGGTA-211ENST00000559850 ZNF462Q96JM2 2506 aa14.07□□□□□ -0.16
RABGGTA-211ENST00000559850 TLN1Q9Y490 2541 aaKnown RBP14.07□□□□□ -0.16
RABGGTA-211ENST00000559850 IGLV3-12A0A075B6K2 115 aa14.06□□□□□ -0.16
RABGGTA-211ENST00000559850 A0A087X1B8 175 aa14.06□□□□□ -0.16
RABGGTA-211ENST00000559850 AGPSO00116 658 aa14.06□□□□□ -0.16
RABGGTA-211ENST00000559850 PRPF4O43172 522 aaKnown RBP eCLIP14.06□□□□□ -0.163e-6■■□□□ 12
RABGGTA-211ENST00000559850 SUV39H1O43463 412 aa14.06□□□□□ -0.16
RABGGTA-211ENST00000559850 CCNT2O60583 730 aaKnown RBP14.06□□□□□ -0.16
RABGGTA-211ENST00000559850 CEACAM4O75871 244 aa14.06□□□□□ -0.16
RABGGTA-211ENST00000559850 KLHL18O94889 574 aa14.06□□□□□ -0.16
RABGGTA-211ENST00000559850 INHBAP08476 426 aa14.06□□□□□ -0.16
RABGGTA-211ENST00000559850 SLC35G6P0C7Q6 338 aa14.06□□□□□ -0.16
RABGGTA-211ENST00000559850 ZNF888P0CJ79 500 aaPredicted RBP14.06□□□□□ -0.16
RABGGTA-211ENST00000559850 C1GALT1C1LP0DN25 315 aa14.06□□□□□ -0.16
RABGGTA-211ENST00000559850 TYK2P29597 1187 aa14.06□□□□□ -0.16
RABGGTA-211ENST00000559850 SERPINB8P50452 374 aa14.06□□□□□ -0.16
RABGGTA-211ENST00000559850 CSRP3P50461 194 aa14.06□□□□□ -0.16
RABGGTA-211ENST00000559850 RRADP55042 308 aa14.06□□□□□ -0.16
RABGGTA-211ENST00000559850 EEF1A2Q05639 463 aaKnown RBP14.06□□□□□ -0.16
RABGGTA-211ENST00000559850 FAM53BQ14153 422 aa14.06□□□□□ -0.16
RABGGTA-211ENST00000559850 SLBPQ14493 270 aaKnown RBP eCLIP14.06□□□□□ -0.16
RABGGTA-211ENST00000559850 TEX35Q5T0J7 233 aa14.06□□□□□ -0.16
RABGGTA-211ENST00000559850 MFSD4BQ5TF39 518 aa14.06□□□□□ -0.16
RABGGTA-211ENST00000559850 SULT1C3Q6IMI6 304 aa14.06□□□□□ -0.16
RABGGTA-211ENST00000559850 SLCO4C1Q6ZQN7 724 aa14.06□□□□□ -0.16
RABGGTA-211ENST00000559850 PARP9Q8IXQ6 854 aa14.06□□□□□ -0.16
RABGGTA-211ENST00000559850 PLD6Q8N2A8 252 aaKnown RBP14.06□□□□□ -0.16
RABGGTA-211ENST00000559850 TCAIMQ8N3R3 496 aa14.06□□□□□ -0.16
RABGGTA-211ENST00000559850 PDPRQ8NCN5 879 aa14.06□□□□□ -0.16
RABGGTA-211ENST00000559850 OR5T3Q8NGG3 340 aa14.06□□□□□ -0.16
RABGGTA-211ENST00000559850 STAG3L4Q8TBR4 150 aa14.06□□□□□ -0.16
RABGGTA-211ENST00000559850 DCAKDQ8WVC6 231 aa14.06□□□□□ -0.16
RABGGTA-211ENST00000559850 FER1L6-AS2Q96M78 137 aa14.06□□□□□ -0.16
RABGGTA-211ENST00000559850 AIF1LQ9BQI0 150 aa14.06□□□□□ -0.16
RABGGTA-211ENST00000559850 TSPYL1Q9H0U9 437 aa14.06□□□□□ -0.16
RABGGTA-211ENST00000559850 NMRAL1Q9HBL8 299 aa14.06□□□□□ -0.16
RABGGTA-211ENST00000559850 ANKHQ9HCJ1 492 aa14.06□□□□□ -0.16
RABGGTA-211ENST00000559850 SEMA3GQ9NS98 782 aa14.06□□□□□ -0.16
RABGGTA-211ENST00000559850 DNAJC11Q9NVH1 559 aa14.06□□□□□ -0.16
RABGGTA-211ENST00000559850 ZNF358Q9NW07 568 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms