RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 MAGEB17A8MXT2 336 aa8.64□□□□□ -1.03
HDDC3-204ENST00000559834 SGK494L7N484 410 aa8.64□□□□□ -1.03
HDDC3-204ENST00000559834 ASNA1O43681 348 aa8.64□□□□□ -1.03
HDDC3-204ENST00000559834 AVILO75366 819 aa8.64□□□□□ -1.03
HDDC3-204ENST00000559834 SP1P08047 785 aa8.64□□□□□ -1.03
HDDC3-204ENST00000559834 HIST1H2AGP0C0S8 130 aaPredicted RBP8.64□□□□□ -1.03
HDDC3-204ENST00000559834 SLC35G6P0C7Q6 338 aa8.64□□□□□ -1.03
HDDC3-204ENST00000559834 ABOP16442 354 aa8.64□□□□□ -1.03
HDDC3-204ENST00000559834 IL1RNP18510 177 aa8.64□□□□□ -1.03
HDDC3-204ENST00000559834 HIST1H2ADP20671 130 aa8.64□□□□□ -1.03
HDDC3-204ENST00000559834 JAK1P23458 1154 aa8.64□□□□□ -1.03
HDDC3-204ENST00000559834 IMPA1P29218 277 aa8.64□□□□□ -1.03
HDDC3-204ENST00000559834 MAGEA6P43360 314 aa8.64□□□□□ -1.03
HDDC3-204ENST00000559834 RGS4P49798 205 aa8.64□□□□□ -1.03
HDDC3-204ENST00000559834 OR4D2P58180 307 aa8.64□□□□□ -1.03
HDDC3-204ENST00000559834 CSNK1G2P78368 415 aa8.64□□□□□ -1.03
HDDC3-204ENST00000559834 ADORA2A-AS1P86434 159 aa8.64□□□□□ -1.03
HDDC3-204ENST00000559834 PMP22Q01453 160 aa8.64□□□□□ -1.03
HDDC3-204ENST00000559834 MEF2AQ02078 507 aaPredicted RBP8.64□□□□□ -1.03
HDDC3-204ENST00000559834 GPS1Q13098 491 aa8.64□□□□□ -1.03
HDDC3-204ENST00000559834 CTBP1Q13363 440 aa8.64□□□□□ -1.03
HDDC3-204ENST00000559834 CUL1Q13616 776 aa8.64□□□□□ -1.03
HDDC3-204ENST00000559834 ABRAXAS2Q15018 415 aa8.64□□□□□ -1.03
HDDC3-204ENST00000559834 HERC3Q15034 1050 aa8.64□□□□□ -1.03
HDDC3-204ENST00000559834 TRIP13Q15645 432 aaPredicted RBP8.64□□□□□ -1.03
HDDC3-204ENST00000559834 MAPKAPK3Q16644 382 aa8.64□□□□□ -1.03
HDDC3-204ENST00000559834 CAPN13Q6MZZ7 669 aaPredicted RBP8.64□□□□□ -1.03
HDDC3-204ENST00000559834 PAPD4Q6PIY7 484 aaKnown RBP8.64□□□□□ -1.03
HDDC3-204ENST00000559834 VN1R4Q7Z5H5 301 aa8.64□□□□□ -1.03
HDDC3-204ENST00000559834 ASPGQ86U10 573 aa8.64□□□□□ -1.03
HDDC3-204ENST00000559834 CRLF3Q8IUI8 442 aa8.64□□□□□ -1.03
HDDC3-204ENST00000559834 GHDCQ8N2G8 530 aa8.64□□□□□ -1.03
HDDC3-204ENST00000559834 TBC1D19Q8N5T2 526 aa8.64□□□□□ -1.03
HDDC3-204ENST00000559834 GABPB2Q8TAK5 448 aaPredicted RBP8.64□□□□□ -1.03
HDDC3-204ENST00000559834 ZNF669Q96BR6 464 aaPredicted RBP8.64□□□□□ -1.03
HDDC3-204ENST00000559834 TM4SF19Q96DZ7 209 aa8.64□□□□□ -1.03
HDDC3-204ENST00000559834 SCMH1Q96GD3 660 aa8.64□□□□□ -1.03
HDDC3-204ENST00000559834 HIST1H2AHQ96KK5 128 aa8.64□□□□□ -1.03
HDDC3-204ENST00000559834 SIGLEC12Q96PQ1 595 aa8.64□□□□□ -1.03
HDDC3-204ENST00000559834 GPR21Q99679 349 aa8.64□□□□□ -1.03
HDDC3-204ENST00000559834 SLC30A3Q99726 388 aa8.64□□□□□ -1.03
HDDC3-204ENST00000559834 HIST1H2AJQ99878 128 aa8.64□□□□□ -1.03
HDDC3-204ENST00000559834 H2AFJQ9BTM1 129 aa8.64□□□□□ -1.03
HDDC3-204ENST00000559834 PARVBQ9HBI1 364 aa8.64□□□□□ -1.03
HDDC3-204ENST00000559834 XAB2Q9HCS7 855 aaKnown RBP8.64□□□□□ -1.03
HDDC3-204ENST00000559834 ANKRD10Q9NXR5 420 aa8.64□□□□□ -1.03
HDDC3-204ENST00000559834 HCN3Q9P1Z3 774 aa8.64□□□□□ -1.03
HDDC3-204ENST00000559834 LRFN1Q9P244 771 aa8.64□□□□□ -1.03
HDDC3-204ENST00000559834 TINAGQ9UJW2 476 aa8.64□□□□□ -1.03
HDDC3-204ENST00000559834 ITGB1BP2Q9UKP3 347 aa8.64□□□□□ -1.03
HDDC3-204ENST00000559834 MEMO1Q9Y316 297 aa8.64□□□□□ -1.03
HDDC3-204ENST00000559834 SCN2AQ99250 2005 aa8.64□□□□□ -1.03
HDDC3-204ENST00000559834 NBPF19A0A087WUL8 3843 aa8.63□□□□□ -1.03
HDDC3-204ENST00000559834 PCNX1Q96RV3 2341 aa8.63□□□□□ -1.03
HDDC3-204ENST00000559834 CELSR2Q9HCU4 2923 aa8.63□□□□□ -1.03
HDDC3-204ENST00000559834 ABCA12Q86UK0 2595 aa8.63□□□□□ -1.03
HDDC3-204ENST00000559834 FEZF1A0PJY2 475 aa8.63□□□□□ -1.03
HDDC3-204ENST00000559834 PABPN1LA6NDY0 278 aaKnown RBP8.63□□□□□ -1.03
HDDC3-204ENST00000559834 OR2W5A6NFC9 320 aa8.63□□□□□ -1.03
HDDC3-204ENST00000559834 GABRR3A8MPY1 467 aa8.63□□□□□ -1.03
HDDC3-204ENST00000559834 E9PLN8 166 aa8.63□□□□□ -1.03
HDDC3-204ENST00000559834 PRRG2O14669 202 aa8.63□□□□□ -1.03
HDDC3-204ENST00000559834 NDC80O14777 642 aa8.63□□□□□ -1.03
HDDC3-204ENST00000559834 SLC16A5O15375 505 aa8.63□□□□□ -1.03
HDDC3-204ENST00000559834 CEP104O60308 925 aa8.63□□□□□ -1.03
HDDC3-204ENST00000559834 WISP2O76076 250 aa8.63□□□□□ -1.03
HDDC3-204ENST00000559834 STATHP02808 62 aa8.63□□□□□ -1.03
HDDC3-204ENST00000559834 C8GP07360 202 aa8.63□□□□□ -1.03
HDDC3-204ENST00000559834 CYB561P49447 251 aa8.63□□□□□ -1.03
HDDC3-204ENST00000559834 EFNA3P52797 238 aa8.63□□□□□ -1.03
HDDC3-204ENST00000559834 TERF1P54274 439 aa8.63□□□□□ -1.03
HDDC3-204ENST00000559834 TBPL1P62380 186 aa8.63□□□□□ -1.03
HDDC3-204ENST00000559834 MPP1Q00013 466 aa8.63□□□□□ -1.03
HDDC3-204ENST00000559834 NAE1Q13564 534 aa8.63□□□□□ -1.03
HDDC3-204ENST00000559834 USP10Q14694 798 aaKnown RBP8.63□□□□□ -1.03
HDDC3-204ENST00000559834 ZNF549Q6P9A3 640 aa8.63□□□□□ -1.03
HDDC3-204ENST00000559834 AGTRAPQ6RW13 159 aa8.63□□□□□ -1.03
HDDC3-204ENST00000559834 LCTLQ6UWM7 567 aa8.63□□□□□ -1.03
HDDC3-204ENST00000559834 PRSS41Q7RTY9 318 aa8.63□□□□□ -1.03
HDDC3-204ENST00000559834 GALNTL5Q7Z4T8 443 aa8.63□□□□□ -1.03
HDDC3-204ENST00000559834 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.63□□□□□ -1.03
HDDC3-204ENST00000559834 CAND1Q86VP6 1230 aaKnown RBP8.63□□□□□ -1.03
HDDC3-204ENST00000559834 SLC26A11Q86WA9 606 aa8.63□□□□□ -1.03
HDDC3-204ENST00000559834 RPS19BP1Q86WX3 136 aaKnown RBP8.63□□□□□ -1.03
HDDC3-204ENST00000559834 CEP97Q8IW35 865 aa8.63□□□□□ -1.03
HDDC3-204ENST00000559834 DENND6AQ8IWF6 608 aa8.63□□□□□ -1.03
HDDC3-204ENST00000559834 CPNE9Q8IYJ1 553 aa8.63□□□□□ -1.03
HDDC3-204ENST00000559834 MFSD9Q8NBP5 474 aa8.63□□□□□ -1.03
HDDC3-204ENST00000559834 SPC24Q8NBT2 197 aa8.63□□□□□ -1.03
HDDC3-204ENST00000559834 KCT2Q8NC54 265 aa8.63□□□□□ -1.03
HDDC3-204ENST00000559834 MCUQ8NE86 351 aa8.63□□□□□ -1.03
HDDC3-204ENST00000559834 GIMAP7Q8NHV1 300 aa8.63□□□□□ -1.03
HDDC3-204ENST00000559834 ZCCHC10Q8TBK6 192 aa8.63□□□□□ -1.03
HDDC3-204ENST00000559834 CD200R1Q8TD46 325 aa8.63□□□□□ -1.03
HDDC3-204ENST00000559834 PHF10Q8WUB8 498 aaKnown RBP8.63□□□□□ -1.03
HDDC3-204ENST00000559834 CHTF18Q8WVB6 975 aa8.63□□□□□ -1.03
HDDC3-204ENST00000559834 TMEM125Q96AQ2 219 aa8.63□□□□□ -1.03
HDDC3-204ENST00000559834 ALKBH8Q96BT7 664 aaKnown RBP8.63□□□□□ -1.03
HDDC3-204ENST00000559834 TBC1D20Q96BZ9 403 aa8.63□□□□□ -1.03
HDDC3-204ENST00000559834 C14orf79Q96F83 325 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms