RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 ITGA1P56199 1179 aa8.62□□□□□ -1.03
HMG20A-209ENST00000559728 VSX2P58304 361 aaPredicted RBP8.62□□□□□ -1.03
HMG20A-209ENST00000559728 RPS15AP62244 130 aaKnown RBP8.62□□□□□ -1.03
HMG20A-209ENST00000559728 CLCQ05315 142 aa8.62□□□□□ -1.03
HMG20A-209ENST00000559728 GPS2Q13227 327 aa8.62□□□□□ -1.03
HMG20A-209ENST00000559728 NR6A1Q15406 480 aa8.62□□□□□ -1.03
HMG20A-209ENST00000559728 TGIF1Q15583 401 aa8.62□□□□□ -1.03
HMG20A-209ENST00000559728 TBC1D25Q3MII6 688 aa8.62□□□□□ -1.03
HMG20A-209ENST00000559728 XKR6Q5GH73 641 aa8.62□□□□□ -1.03
HMG20A-209ENST00000559728 WASHC2DQ5SRD0 308 aa8.62□□□□□ -1.03
HMG20A-209ENST00000559728 DCAF12Q5T6F0 453 aa8.62□□□□□ -1.03
HMG20A-209ENST00000559728 ZNF517Q6ZMY9 492 aaPredicted RBP8.62□□□□□ -1.03
HMG20A-209ENST00000559728 FRMD7Q6ZUT3 714 aa8.62□□□□□ -1.03
HMG20A-209ENST00000559728 PRSS41Q7RTY9 318 aa8.62□□□□□ -1.03
HMG20A-209ENST00000559728 UBE3DQ7Z6J8 389 aa8.62□□□□□ -1.03
HMG20A-209ENST00000559728 ZFAND4Q86XD8 727 aa8.62□□□□□ -1.03
HMG20A-209ENST00000559728 SLC22A9Q8IVM8 553 aa8.62□□□□□ -1.03
HMG20A-209ENST00000559728 TMEM151BQ8IW70 566 aa8.62□□□□□ -1.03
HMG20A-209ENST00000559728 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.62□□□□□ -1.03
HMG20A-209ENST00000559728 LAS2Q8IYD9 372 aa8.62□□□□□ -1.03
HMG20A-209ENST00000559728 RNF175Q8N4F7 328 aa8.62□□□□□ -1.03
HMG20A-209ENST00000559728 ZNF655Q8N720 491 aaPredicted RBP8.62□□□□□ -1.03
HMG20A-209ENST00000559728 CSNK1A1LQ8N752 337 aa8.62□□□□□ -1.03
HMG20A-209ENST00000559728 KCT2Q8NC54 265 aa8.62□□□□□ -1.03
HMG20A-209ENST00000559728 OR4F6Q8NGB9 312 aa8.62□□□□□ -1.03
HMG20A-209ENST00000559728 OR8K5Q8NH50 307 aa8.62□□□□□ -1.03
HMG20A-209ENST00000559728 WDR20Q8TBZ3 569 aa8.62□□□□□ -1.03
HMG20A-209ENST00000559728 NT5CQ8TCD5 201 aa8.62□□□□□ -1.03
HMG20A-209ENST00000559728 TRPC4APQ8TEL6 797 aa8.62□□□□□ -1.03
HMG20A-209ENST00000559728 SMIM10Q96HG1 83 aa8.62□□□□□ -1.03
HMG20A-209ENST00000559728 PKNOX2Q96KN3 472 aa8.62□□□□□ -1.03
HMG20A-209ENST00000559728 SELENOSQ9BQE4 189 aa8.62□□□□□ -1.03
HMG20A-209ENST00000559728 ZPBPQ9BS86 351 aa8.62□□□□□ -1.03
HMG20A-209ENST00000559728 EFCAB11Q9BUY7 163 aa8.62□□□□□ -1.03
HMG20A-209ENST00000559728 CAPS2Q9BXY5 557 aa8.62□□□□□ -1.03
HMG20A-209ENST00000559728 ASPSCR1Q9BZE9 553 aa8.62□□□□□ -1.03
HMG20A-209ENST00000559728 C20orf27Q9GZN8 174 aa8.62□□□□□ -1.03
HMG20A-209ENST00000559728 RHBGQ9H310 441 aa8.62□□□□□ -1.03
HMG20A-209ENST00000559728 MLXIPLQ9NP71 852 aa8.62□□□□□ -1.03
HMG20A-209ENST00000559728 SEMA4BQ9NPR2 832 aaPredicted RBP8.62□□□□□ -1.03
HMG20A-209ENST00000559728 AKAP7Q9P0M2 348 aaPredicted RBP8.62□□□□□ -1.03
HMG20A-209ENST00000559728 ZFP69BQ9UJL9 534 aa8.62□□□□□ -1.03
HMG20A-209ENST00000559728 RUVBL1Q9Y265 456 aaKnown RBP8.62□□□□□ -1.03
HMG20A-209ENST00000559728 TSC22D4Q9Y3Q8 395 aa8.62□□□□□ -1.03
HMG20A-209ENST00000559728 AP1M2Q9Y6Q5 423 aa8.62□□□□□ -1.03
HMG20A-209ENST00000559728 H0YIV9 168 aa8.61□□□□□ -1.03
HMG20A-209ENST00000559728 CLGNO14967 610 aa8.61□□□□□ -1.03
HMG20A-209ENST00000559728 TM9SF1O15321 606 aa8.61□□□□□ -1.03
HMG20A-209ENST00000559728 ZSCAN9O15535 394 aaPredicted RBP8.61□□□□□ -1.03
HMG20A-209ENST00000559728 OR1F1O43749 312 aa8.61□□□□□ -1.03
HMG20A-209ENST00000559728 UGDHO60701 494 aa8.61□□□□□ -1.03
HMG20A-209ENST00000559728 TRIM13O60858 407 aa8.61□□□□□ -1.03
HMG20A-209ENST00000559728 CNOT3O75175 753 aaKnown RBP8.61□□□□□ -1.03
HMG20A-209ENST00000559728 DNAJB6O75190 326 aa8.61□□□□□ -1.03
HMG20A-209ENST00000559728 SCRG1O75711 98 aa8.61□□□□□ -1.03
HMG20A-209ENST00000559728 OR2B3O76000 313 aa8.61□□□□□ -1.03
HMG20A-209ENST00000559728 ETHE1O95571 254 aa8.61□□□□□ -1.03
HMG20A-209ENST00000559728 ONECUT2O95948 504 aa8.61□□□□□ -1.03
HMG20A-209ENST00000559728 NTRK1P04629 796 aa8.61□□□□□ -1.03
HMG20A-209ENST00000559728 CAPN1P07384 714 aa8.61□□□□□ -1.03
HMG20A-209ENST00000559728 HNRNPH1P31943 449 aaKnown RBP8.61□□□□□ -1.03
HMG20A-209ENST00000559728 AHRP35869 848 aa8.61□□□□□ -1.03
HMG20A-209ENST00000559728 FOXA1P55317 472 aa8.61□□□□□ -1.03
HMG20A-209ENST00000559728 IRF8Q02556 426 aa8.61□□□□□ -1.03
HMG20A-209ENST00000559728 SRSF6Q13247 344 aaKnown RBP8.61□□□□□ -1.03
HMG20A-209ENST00000559728 KIF26BQ2KJY2 2108 aa8.61□□□□□ -1.03
HMG20A-209ENST00000559728 ADPRMQ3LIE5 342 aa8.61□□□□□ -1.03
HMG20A-209ENST00000559728 GGTA1PQ4G0N0 100 aa8.61□□□□□ -1.03
HMG20A-209ENST00000559728 LIPMQ5VYY2 423 aa8.61□□□□□ -1.03
HMG20A-209ENST00000559728 LIPJQ5W064 366 aa8.61□□□□□ -1.03
HMG20A-209ENST00000559728 RHBDD2Q6NTF9 364 aa8.61□□□□□ -1.03
HMG20A-209ENST00000559728 TMEM214Q6NUQ4 689 aaKnown RBP8.61□□□□□ -1.03
HMG20A-209ENST00000559728 TMIGD1Q6UXZ0 262 aa8.61□□□□□ -1.03
HMG20A-209ENST00000559728 CEACAM20Q6UY09 585 aa8.61□□□□□ -1.03
HMG20A-209ENST00000559728 ZCCHC23Q6ZST2 131 aa8.61□□□□□ -1.03
HMG20A-209ENST00000559728 PDSS2Q86YH6 399 aa8.61□□□□□ -1.03
HMG20A-209ENST00000559728 AFAP1L2Q8N4X5 818 aa8.61□□□□□ -1.03
HMG20A-209ENST00000559728 OR7G3Q8NG95 312 aa8.61□□□□□ -1.03
HMG20A-209ENST00000559728 AGAP11Q8TF27 550 aa8.61□□□□□ -1.03
HMG20A-209ENST00000559728 ZNF473Q8WTR7 871 aaKnown RBP8.61□□□□□ -1.03
HMG20A-209ENST00000559728 SLC13A3Q8WWT9 602 aa8.61□□□□□ -1.03
HMG20A-209ENST00000559728 CCDC126Q96EE4 140 aa8.61□□□□□ -1.03
HMG20A-209ENST00000559728 ZNF578Q96N58 590 aaPredicted RBP8.61□□□□□ -1.03
HMG20A-209ENST00000559728 LRFN5Q96NI6 719 aa8.61□□□□□ -1.03
HMG20A-209ENST00000559728 GBP5Q96PP8 586 aa8.61□□□□□ -1.03
HMG20A-209ENST00000559728 TEFMQ96QE5 360 aaKnown RBP8.61□□□□□ -1.03
HMG20A-209ENST00000559728 ZNF382Q96SR6 550 aa8.61□□□□□ -1.03
HMG20A-209ENST00000559728 RUFY1Q96T51 708 aa8.61□□□□□ -1.03
HMG20A-209ENST00000559728 AIF1LQ9BQI0 150 aa8.61□□□□□ -1.03
HMG20A-209ENST00000559728 KLHL31Q9H511 634 aa8.61□□□□□ -1.03
HMG20A-209ENST00000559728 ZNF395Q9H8N7 513 aaPredicted RBP8.61□□□□□ -1.03
HMG20A-209ENST00000559728 DHCR7Q9UBM7 475 aaKnown RBP8.61□□□□□ -1.03
HMG20A-209ENST00000559728 SERTAD3Q9UJW9 196 aa8.61□□□□□ -1.03
HMG20A-209ENST00000559728 AK5Q9Y6K8 562 aa8.61□□□□□ -1.03
HMG20A-209ENST00000559728 DMXL2Q8TDJ6 3036 aa8.6□□□□□ -1.03
HMG20A-209ENST00000559728 HYKKA2RU49 373 aa8.6□□□□□ -1.03
HMG20A-209ENST00000559728 GOLGA6L10A6NI86 522 aa8.6□□□□□ -1.03
HMG20A-209ENST00000559728 H3BQF6 201 aa8.6□□□□□ -1.03
HMG20A-209ENST00000559728 EFSO43281 561 aa8.6□□□□□ -1.03
HMG20A-209ENST00000559728 ITM2AO43736 263 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms