RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 SLC9B2Q86UD5 537 aa12.16□□□□□ -0.46
USP3-213ENST00000559711 SPATA24Q86W54 205 aa12.16□□□□□ -0.46
USP3-213ENST00000559711 AQP12AQ8IXF9 295 aa12.16□□□□□ -0.46
USP3-213ENST00000559711 GOLM1Q8NBJ4 401 aa12.16□□□□□ -0.46
USP3-213ENST00000559711 OR2L3Q8NG85 312 aa12.16□□□□□ -0.46
USP3-213ENST00000559711 OR7A2PQ8NGA2 310 aa12.16□□□□□ -0.46
USP3-213ENST00000559711 WDR48Q8TAF3 677 aa12.16□□□□□ -0.46
USP3-213ENST00000559711 LCN9Q8WX39 176 aa12.16□□□□□ -0.46
USP3-213ENST00000559711 COQ8BQ96D53 544 aa12.16□□□□□ -0.46
USP3-213ENST00000559711 KLHDC7BQ96G42 594 aa12.16□□□□□ -0.46
USP3-213ENST00000559711 SH3GL1Q99961 368 aa12.16□□□□□ -0.46
USP3-213ENST00000559711 KCTD14Q9BQ13 255 aaPredicted RBP12.16□□□□□ -0.46
USP3-213ENST00000559711 SARGQ9BW04 601 aa12.16□□□□□ -0.46
USP3-213ENST00000559711 GSDMCQ9BYG8 508 aa12.16□□□□□ -0.46
USP3-213ENST00000559711 TCEAL2Q9H3H9 227 aaPredicted RBP12.16□□□□□ -0.46
USP3-213ENST00000559711 PRM3Q9NNZ6 103 aa12.16□□□□□ -0.46
USP3-213ENST00000559711 MRPS30Q9NP92 439 aaKnown RBP12.16□□□□□ -0.46
USP3-213ENST00000559711 FAM120CQ9NX05 1096 aaKnown RBP12.16□□□□□ -0.46
USP3-213ENST00000559711 SPHK1Q9NYA1 384 aa12.16□□□□□ -0.46
USP3-213ENST00000559711 AHSPQ9NZD4 102 aa12.16□□□□□ -0.46
USP3-213ENST00000559711 ATP6V1HQ9UI12 483 aa12.16□□□□□ -0.46
USP3-213ENST00000559711 MCM8Q9UJA3 840 aa12.16□□□□□ -0.46
USP3-213ENST00000559711 LRRC42Q9Y546 428 aa12.16□□□□□ -0.46
USP3-213ENST00000559711 PCDHB14Q9Y5E9 798 aa12.16□□□□□ -0.46
USP3-213ENST00000559711 SLCO1B1Q9Y6L6 691 aa12.16□□□□□ -0.46
USP3-213ENST00000559711 PRSS51A0A1B0GVH4 220 aa12.16□□□□□ -0.46
USP3-213ENST00000559711 GNG14A0A1W2PPG7 69 aa12.16□□□□□ -0.46
USP3-213ENST00000559711 TRBC2A0A5B9 178 aa12.16□□□□□ -0.46
USP3-213ENST00000559711 FEZF1A0PJY2 475 aa12.16□□□□□ -0.46
USP3-213ENST00000559711 GABRR3A8MPY1 467 aa12.16□□□□□ -0.46
USP3-213ENST00000559711 LCMT2O60294 686 aaKnown RBP12.16□□□□□ -0.46
USP3-213ENST00000559711 NDUFS2O75306 463 aa12.16□□□□□ -0.46
USP3-213ENST00000559711 CLEC3AO75596 197 aa12.16□□□□□ -0.46
USP3-213ENST00000559711 CCNDBP1O95273 360 aa12.16□□□□□ -0.46
USP3-213ENST00000559711 CHRM5P08912 532 aaPredicted RBP12.16□□□□□ -0.46
USP3-213ENST00000559711 COX7A2P14406 83 aa12.16□□□□□ -0.46
USP3-213ENST00000559711 PLIN5Q00G26 463 aa12.16□□□□□ -0.46
USP3-213ENST00000559711 TCEA2Q15560 299 aa12.16□□□□□ -0.46
USP3-213ENST00000559711 IRAK1BP1Q5VVH5 260 aa12.16□□□□□ -0.46
USP3-213ENST00000559711 KHDRBS2Q5VWX1 349 aaKnown RBP12.16□□□□□ -0.46
USP3-213ENST00000559711 OR4F3Q6IEY1 312 aa12.16□□□□□ -0.46
USP3-213ENST00000559711 ADGRF3Q8IZF5 1079 aa12.16□□□□□ -0.46
USP3-213ENST00000559711 PJA1Q8NG27 643 aa12.16□□□□□ -0.46
USP3-213ENST00000559711 TTLQ8NG68 377 aa12.16□□□□□ -0.46
USP3-213ENST00000559711 OR4E2Q8NGC2 313 aa12.16□□□□□ -0.46
USP3-213ENST00000559711 SNX19Q92543 992 aa12.16□□□□□ -0.46
USP3-213ENST00000559711 RSRC1Q96IZ7 334 aaKnown RBP12.16□□□□□ -0.46
USP3-213ENST00000559711 SLC6A18Q96N87 628 aa12.16□□□□□ -0.46
USP3-213ENST00000559711 ZNF583Q96ND8 569 aa12.16□□□□□ -0.46
USP3-213ENST00000559711 PRPF18Q99633 342 aaKnown RBP12.16□□□□□ -0.46
USP3-213ENST00000559711 TRIM15Q9C019 465 aa12.16□□□□□ -0.46
USP3-213ENST00000559711 REXO4Q9GZR2 422 aaKnown RBP12.16□□□□□ -0.46
USP3-213ENST00000559711 SLC6A20Q9NP91 592 aa12.16□□□□□ -0.46
USP3-213ENST00000559711 MYNNQ9NPC7 610 aa12.16□□□□□ -0.46
USP3-213ENST00000559711 C6orf203Q9P0P8 240 aaPredicted RBP12.16□□□□□ -0.46
USP3-213ENST00000559711 TAAR2Q9P1P5 351 aa12.16□□□□□ -0.46
USP3-213ENST00000559711 EXO1Q9UQ84 846 aaKnown RBP12.16□□□□□ -0.46
USP3-213ENST00000559711 C15orf41Q9Y2V0 281 aa12.16□□□□□ -0.46
USP3-213ENST00000559711 WBP11Q9Y2W2 641 aaKnown RBP12.16□□□□□ -0.46
USP3-213ENST00000559711 SNX13Q9Y5W8 968 aa12.16□□□□□ -0.46
USP3-213ENST00000559711 A0A1W2PR77 199 aa12.15□□□□□ -0.46
USP3-213ENST00000559711 OR5K4A6NMS3 321 aa12.15□□□□□ -0.46
USP3-213ENST00000559711 SAP18O00422 153 aaKnown RBP12.15□□□□□ -0.46
USP3-213ENST00000559711 CASQ2O14958 399 aaPredicted RBP12.15□□□□□ -0.46
USP3-213ENST00000559711 OR1F1O43749 312 aa12.15□□□□□ -0.46
USP3-213ENST00000559711 KLK1P06870 262 aa12.15□□□□□ -0.46
USP3-213ENST00000559711 LAMP1P11279 417 aa12.15□□□□□ -0.46
USP3-213ENST00000559711 PIM1P11309 404 aaPredicted RBP12.15□□□□□ -0.46
USP3-213ENST00000559711 ATP6V1B2P21281 511 aa12.15□□□□□ -0.46
USP3-213ENST00000559711 GSTM2P28161 218 aa12.15□□□□□ -0.46
USP3-213ENST00000559711 CMPK1P30085 196 aa12.15□□□□□ -0.46
USP3-213ENST00000559711 HPCAL1P37235 193 aa12.15□□□□□ -0.46
USP3-213ENST00000559711 PXNP49023 591 aaPredicted RBP12.15□□□□□ -0.46
USP3-213ENST00000559711 BLKP51451 505 aa12.15□□□□□ -0.46
USP3-213ENST00000559711 MTPNP58546 118 aa12.15□□□□□ -0.46
USP3-213ENST00000559711 DUOXA1Q1HG43 343 aa12.15□□□□□ -0.46
USP3-213ENST00000559711 HKDC1Q2TB90 917 aa12.15□□□□□ -0.46
USP3-213ENST00000559711 CPTPQ5TA50 214 aa12.15□□□□□ -0.46
USP3-213ENST00000559711 FAM71E1Q6IPT2 247 aa12.15□□□□□ -0.46
USP3-213ENST00000559711 CYP2R1Q6VVX0 501 aa12.15□□□□□ -0.46
USP3-213ENST00000559711 PARGQ86W56 976 aa12.15□□□□□ -0.46
USP3-213ENST00000559711 PQLC1Q8N2U9 271 aa12.15□□□□□ -0.46
USP3-213ENST00000559711 FBXL6Q8N531 539 aa12.15□□□□□ -0.46
USP3-213ENST00000559711 MFSD2AQ8NA29 543 aa12.15□□□□□ -0.46
USP3-213ENST00000559711 CREB3L4Q8TEY5 395 aa12.15□□□□□ -0.46
USP3-213ENST00000559711 C16orf78Q8WTQ4 265 aa12.15□□□□□ -0.46
USP3-213ENST00000559711 SLC22A18Q96BI1 424 aa12.15□□□□□ -0.46
USP3-213ENST00000559711 LRGUKQ96M69 825 aa12.15□□□□□ -0.46
USP3-213ENST00000559711 TACO1Q9BSH4 297 aaKnown RBP12.15□□□□□ -0.46
USP3-213ENST00000559711 INPP5KQ9BT40 448 aa12.15□□□□□ -0.46
USP3-213ENST00000559711 ZNF717Q9BY31 904 aaPredicted RBP12.15□□□□□ -0.46
USP3-213ENST00000559711 SRMSQ9H3Y6 488 aa12.15□□□□□ -0.46
USP3-213ENST00000559711 REEP4Q9H6H4 257 aa12.15□□□□□ -0.46
USP3-213ENST00000559711 AASDHPPTQ9NRN7 309 aa12.15□□□□□ -0.46
USP3-213ENST00000559711 SLC6A13Q9NSD5 602 aa12.15□□□□□ -0.46
USP3-213ENST00000559711 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.15□□□□□ -0.46
USP3-213ENST00000559711 EGFL7Q9UHF1 273 aa12.15□□□□□ -0.46
USP3-213ENST00000559711 BTBD3Q9Y2F9 522 aa12.15□□□□□ -0.46
USP3-213ENST00000559711 PCDHB3Q9Y5E6 796 aa12.15□□□□□ -0.46
USP3-213ENST00000559711 TRBV23OR9-2A0A075B6M9 112 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms