RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 PCBD2Q9H0N5 130 aa15.87■□□□□ 0.13
TPM1-219ENST00000559397 TAC3Q9UHF0 121 aa15.87■□□□□ 0.13
TPM1-219ENST00000559397 ATXN7L1Q9ULK2 861 aaPredicted RBP15.87■□□□□ 0.13
TPM1-219ENST00000559397 PCDHGA1Q9Y5H4 931 aa15.87■□□□□ 0.13
TPM1-219ENST00000559397 COL27A1Q8IZC6 1860 aaPredicted RBP15.86■□□□□ 0.13
TPM1-219ENST00000559397 C9P02748 559 aa15.86■□□□□ 0.13
TPM1-219ENST00000559397 SNRPB2P08579 225 aaKnown RBP15.86■□□□□ 0.13
TPM1-219ENST00000559397 HOXB3P14651 431 aaPredicted RBP15.86■□□□□ 0.13
TPM1-219ENST00000559397 CD22P20273 847 aa15.86■□□□□ 0.13
TPM1-219ENST00000559397 HNF4AP41235 474 aa15.86■□□□□ 0.13
TPM1-219ENST00000559397 GFERP55789 205 aa15.86■□□□□ 0.13
TPM1-219ENST00000559397 PRDX1Q06830 199 aaKnown RBP15.86■□□□□ 0.13
TPM1-219ENST00000559397 RIPK1Q13546 671 aa15.86■□□□□ 0.13
TPM1-219ENST00000559397 DOC2AQ14183 400 aa15.86■□□□□ 0.13
TPM1-219ENST00000559397 NR6A1Q15406 480 aa15.86■□□□□ 0.13
TPM1-219ENST00000559397 CLPPQ16740 277 aaPredicted RBP15.86■□□□□ 0.13
TPM1-219ENST00000559397 AP5B1Q2VPB7 878 aa15.86■□□□□ 0.13
TPM1-219ENST00000559397 PDCD4Q53EL6 469 aaKnown RBP15.86■□□□□ 0.13
TPM1-219ENST00000559397 GRHL2Q6ISB3 625 aa15.86■□□□□ 0.13
TPM1-219ENST00000559397 ARMC6Q6NXE6 501 aa15.86■□□□□ 0.13
TPM1-219ENST00000559397 PAOXQ6QHF9 649 aa15.86■□□□□ 0.13
TPM1-219ENST00000559397 SPESP1Q6UW49 350 aa15.86■□□□□ 0.13
TPM1-219ENST00000559397 SLCO4C1Q6ZQN7 724 aa15.86■□□□□ 0.13
TPM1-219ENST00000559397 MYLK4Q86YV6 388 aaPredicted RBP15.86■□□□□ 0.13
TPM1-219ENST00000559397 FAM20CQ8IXL6 584 aa15.86■□□□□ 0.13
TPM1-219ENST00000559397 ARHGAP24Q8N264 748 aa15.86■□□□□ 0.13
TPM1-219ENST00000559397 OR2L3Q8NG85 312 aa15.86■□□□□ 0.13
TPM1-219ENST00000559397 OR9I1Q8NGQ6 314 aa15.86■□□□□ 0.13
TPM1-219ENST00000559397 MCUR1Q96AQ8 359 aa15.86■□□□□ 0.13
TPM1-219ENST00000559397 RCN3Q96D15 328 aa15.86■□□□□ 0.13
TPM1-219ENST00000559397 WDR34Q96EX3 536 aa15.86■□□□□ 0.13
TPM1-219ENST00000559397 PPM1MQ96MI6 270 aa15.86■□□□□ 0.13
TPM1-219ENST00000559397 NUDT22Q9BRQ3 303 aa15.86■□□□□ 0.13
TPM1-219ENST00000559397 EFCAB1Q9HAE3 211 aa15.86■□□□□ 0.13
TPM1-219ENST00000559397 CCDC167Q9P0B6 97 aa15.86■□□□□ 0.13
TPM1-219ENST00000559397 TMEM9Q9P0T7 183 aa15.86■□□□□ 0.13
TPM1-219ENST00000559397 SH2B3Q9UQQ2 575 aa15.86■□□□□ 0.13
TPM1-219ENST00000559397 KCNE2Q9Y6J6 123 aa15.86■□□□□ 0.13
TPM1-219ENST00000559397 MN1Q10571 1320 aaPredicted RBP15.86■□□□□ 0.13
TPM1-219ENST00000559397 E7EQ34 232 aa15.86■□□□□ 0.13
TPM1-219ENST00000559397 H0YIV9 168 aa15.86■□□□□ 0.13
TPM1-219ENST00000559397 CLGNO14967 610 aa15.86■□□□□ 0.13
TPM1-219ENST00000559397 RFPL3O75679 317 aa15.86■□□□□ 0.13
TPM1-219ENST00000559397 CPNE6O95741 557 aa15.86■□□□□ 0.13
TPM1-219ENST00000559397 PDYNP01213 254 aa15.86■□□□□ 0.13
TPM1-219ENST00000559397 GNAZP19086 355 aa15.86■□□□□ 0.13
TPM1-219ENST00000559397 PRPH2P23942 346 aa15.86■□□□□ 0.13
TPM1-219ENST00000559397 LSSP48449 732 aa15.86■□□□□ 0.13
TPM1-219ENST00000559397 STX5Q13190 355 aa15.86■□□□□ 0.13
TPM1-219ENST00000559397 SF1Q15637 639 aaKnown RBP15.86■□□□□ 0.13
TPM1-219ENST00000559397 SLC5A12Q1EHB4 618 aa15.86■□□□□ 0.13
TPM1-219ENST00000559397 XKR6Q5GH73 641 aa15.86■□□□□ 0.13
TPM1-219ENST00000559397 THEMIS2Q5TEJ8 643 aa15.86■□□□□ 0.13
TPM1-219ENST00000559397 KIAA1614Q5VZ46 1190 aa15.86■□□□□ 0.13
TPM1-219ENST00000559397 FBXW10Q5XX13 1052 aa15.86■□□□□ 0.13
TPM1-219ENST00000559397 FRG2Q64ET8 278 aa15.86■□□□□ 0.13
TPM1-219ENST00000559397 ICE2Q659A1 982 aa15.86■□□□□ 0.13
TPM1-219ENST00000559397 IRGCQ6NXR0 463 aa15.86■□□□□ 0.13
TPM1-219ENST00000559397 TMEM71Q6P5X7 295 aa15.86■□□□□ 0.13
TPM1-219ENST00000559397 ZNF574Q6ZN55 896 aaPredicted RBP15.86■□□□□ 0.13
TPM1-219ENST00000559397 FNDC5Q8NAU1 212 aa15.86■□□□□ 0.13
TPM1-219ENST00000559397 TGM7Q96PF1 710 aa15.86■□□□□ 0.13
TPM1-219ENST00000559397 FRG2BQ96QU4 278 aa15.86■□□□□ 0.13
TPM1-219ENST00000559397 HAUS8Q9BT25 410 aa15.86■□□□□ 0.13
TPM1-219ENST00000559397 SLC25A23Q9BV35 468 aa15.86■□□□□ 0.13
TPM1-219ENST00000559397 ASIC5Q9NY37 505 aa15.86■□□□□ 0.13
TPM1-219ENST00000559397 ZIM2Q9NZV7 527 aa15.86■□□□□ 0.13
TPM1-219ENST00000559397 A0A088AWK7 358 aa15.85■□□□□ 0.13
TPM1-219ENST00000559397 IGKV1-8A0A0C4DH67 115 aa15.85■□□□□ 0.13
TPM1-219ENST00000559397 AIM2O14862 343 aa15.85■□□□□ 0.13
TPM1-219ENST00000559397 DKK1O94907 266 aa15.85■□□□□ 0.13
TPM1-219ENST00000559397 PPM1FP49593 454 aaPredicted RBP15.85■□□□□ 0.13
TPM1-219ENST00000559397 RPS6KA2Q15349 733 aa15.85■□□□□ 0.13
TPM1-219ENST00000559397 RFTN2Q52LD8 501 aaPredicted RBP15.85■□□□□ 0.13
TPM1-219ENST00000559397 SGO1Q5FBB7 561 aa15.85■□□□□ 0.13
TPM1-219ENST00000559397 PGM2L1Q6PCE3 622 aa15.85■□□□□ 0.13
TPM1-219ENST00000559397 SLCO6A1Q86UG4 719 aa15.85■□□□□ 0.13
TPM1-219ENST00000559397 TRIM73Q86UV7 250 aa15.85■□□□□ 0.13
TPM1-219ENST00000559397 PLXDC1Q8IUK5 500 aa15.85■□□□□ 0.13
TPM1-219ENST00000559397 DSELQ8IZU8 1212 aa15.85■□□□□ 0.13
TPM1-219ENST00000559397 WDR20Q8TBZ3 569 aa15.85■□□□□ 0.13
TPM1-219ENST00000559397 TSPEARQ8WU66 669 aa15.85■□□□□ 0.13
TPM1-219ENST00000559397 SELENOMQ8WWX9 145 aa15.85■□□□□ 0.13
TPM1-219ENST00000559397 ZDHHC12Q96GR4 267 aa15.85■□□□□ 0.13
TPM1-219ENST00000559397 THTPAQ9BU02 230 aa15.85■□□□□ 0.13
TPM1-219ENST00000559397 ACPTQ9BZG2 426 aa15.85■□□□□ 0.13
TPM1-219ENST00000559397 ELOVL6Q9H5J4 265 aa15.85■□□□□ 0.13
TPM1-219ENST00000559397 SLC52A3Q9NQ40 469 aa15.85■□□□□ 0.13
TPM1-219ENST00000559397 SEMA5BQ9P283 1151 aa15.85■□□□□ 0.13
TPM1-219ENST00000559397 PDP2Q9P2J9 529 aa15.85■□□□□ 0.13
TPM1-219ENST00000559397 A0A0J9YY10 115 aa15.84■□□□□ 0.13
TPM1-219ENST00000559397 A8MUI8 341 aa15.84■□□□□ 0.13
TPM1-219ENST00000559397 FBP2O00757 339 aa15.84■□□□□ 0.13
TPM1-219ENST00000559397 KIF1CO43896 1103 aaKnown RBP15.84■□□□□ 0.13
TPM1-219ENST00000559397 FKBP9O95302 570 aa15.84■□□□□ 0.13
TPM1-219ENST00000559397 CEACAM1P13688 526 aa15.84■□□□□ 0.13
TPM1-219ENST00000559397 NUDT2P50583 147 aa15.84■□□□□ 0.13
TPM1-219ENST00000559397 ABATP80404 500 aa15.84■□□□□ 0.13
TPM1-219ENST00000559397 E2F1Q01094 437 aa15.84■□□□□ 0.13
TPM1-219ENST00000559397 HMGCS1Q01581 520 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms