RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 TTC23LQ6PF05 361 aa7.03□□□□□ -1.28
SPG11-213ENST00000558988 ZNF534Q76KX8 674 aa7.03□□□□□ -1.28
SPG11-213ENST00000558988 NLRC3Q7RTR2 1065 aa7.03□□□□□ -1.28
SPG11-213ENST00000558988 MRGPREQ86SM8 312 aa7.03□□□□□ -1.28
SPG11-213ENST00000558988 PRSS58Q8IYP2 241 aa7.03□□□□□ -1.28
SPG11-213ENST00000558988 SLC22A15Q8IZD6 547 aa7.03□□□□□ -1.28
SPG11-213ENST00000558988 RNF10Q8N5U6 811 aaKnown RBP7.03□□□□□ -1.28
SPG11-213ENST00000558988 ZBTB2Q8N680 514 aa7.03□□□□□ -1.28
SPG11-213ENST00000558988 CPT1CQ8TCG5 803 aa7.03□□□□□ -1.28
SPG11-213ENST00000558988 MIB2Q96AX9 1013 aa7.03□□□□□ -1.28
SPG11-213ENST00000558988 LRFN5Q96NI6 719 aa7.03□□□□□ -1.28
SPG11-213ENST00000558988 C19orf43Q9BQ61 176 aa7.03□□□□□ -1.28
SPG11-213ENST00000558988 NUDT9Q9BW91 350 aa7.03□□□□□ -1.28
SPG11-213ENST00000558988 SYTL2Q9HCH5 934 aa7.03□□□□□ -1.28
SPG11-213ENST00000558988 CASS4Q9NQ75 786 aa7.03□□□□□ -1.28
SPG11-213ENST00000558988 SYBUQ9NX95 663 aa7.03□□□□□ -1.28
SPG11-213ENST00000558988 GPR83Q9NYM4 423 aa7.03□□□□□ -1.28
SPG11-213ENST00000558988 OR6C2Q9NZP2 312 aa7.03□□□□□ -1.28
SPG11-213ENST00000558988 BFARQ9NZS9 450 aa7.03□□□□□ -1.28
SPG11-213ENST00000558988 ANKMY1Q9P2S6 941 aa7.03□□□□□ -1.28
SPG11-213ENST00000558988 NFS1Q9Y697 457 aa7.03□□□□□ -1.28
SPG11-213ENST00000558988 AP1M2Q9Y6Q5 423 aa7.03□□□□□ -1.28
SPG11-213ENST00000558988 PRMT5O14744 637 aaPredicted RBP7.02□□□□□ -1.29
SPG11-213ENST00000558988 DPM1O60762 260 aa7.02□□□□□ -1.29
SPG11-213ENST00000558988 SUN1O94901 812 aa7.02□□□□□ -1.29
SPG11-213ENST00000558988 VAPBO95292 243 aa7.02□□□□□ -1.29
SPG11-213ENST00000558988 RPN2P04844 631 aa7.02□□□□□ -1.29
SPG11-213ENST00000558988 EIF2S1P05198 315 aaKnown RBP7.02□□□□□ -1.29
SPG11-213ENST00000558988 CAPN1P07384 714 aa7.02□□□□□ -1.29
SPG11-213ENST00000558988 CCDC175P0C221 793 aa7.02□□□□□ -1.29
SPG11-213ENST00000558988 CD9P21926 228 aa7.02□□□□□ -1.29
SPG11-213ENST00000558988 AOAHP28039 575 aa7.02□□□□□ -1.29
SPG11-213ENST00000558988 FMO4P31512 558 aa7.02□□□□□ -1.29
SPG11-213ENST00000558988 TTPAP49638 278 aa7.02□□□□□ -1.29
SPG11-213ENST00000558988 RAB28P51157 221 aa7.02□□□□□ -1.29
SPG11-213ENST00000558988 PLOD1Q02809 727 aaPredicted RBP7.02□□□□□ -1.29
SPG11-213ENST00000558988 KIR2DS3Q14952 304 aa7.02□□□□□ -1.29
SPG11-213ENST00000558988 CYP2A13Q16696 494 aa7.02□□□□□ -1.29
SPG11-213ENST00000558988 SLC5A12Q1EHB4 618 aa7.02□□□□□ -1.29
SPG11-213ENST00000558988 CCSMST1Q4G0I0 132 aa7.02□□□□□ -1.29
SPG11-213ENST00000558988 NKAIN1Q4KMZ8 207 aa7.02□□□□□ -1.29
SPG11-213ENST00000558988 DNAJC21Q5F1R6 531 aaKnown RBP7.02□□□□□ -1.29
SPG11-213ENST00000558988 PCID2Q5JVF3 399 aa7.02□□□□□ -1.29
SPG11-213ENST00000558988 HIST2H2BCQ6DN03 193 aa7.02□□□□□ -1.29
SPG11-213ENST00000558988 ZNF517Q6ZMY9 492 aaPredicted RBP7.02□□□□□ -1.29
SPG11-213ENST00000558988 NLRP9Q7RTR0 991 aa7.02□□□□□ -1.29
SPG11-213ENST00000558988 OTOAQ7RTW8 1153 aa7.02□□□□□ -1.29
SPG11-213ENST00000558988 MRGPRGQ86SM5 289 aa7.02□□□□□ -1.29
SPG11-213ENST00000558988 DCUN1D3Q8IWE4 304 aa7.02□□□□□ -1.29
SPG11-213ENST00000558988 FLVCR1-AS1Q8TAF5 88 aa7.02□□□□□ -1.29
SPG11-213ENST00000558988 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.02□□□□□ -1.29
SPG11-213ENST00000558988 ASZ1Q8WWH4 475 aa7.02□□□□□ -1.29
SPG11-213ENST00000558988 MFSD3Q96ES6 412 aa7.02□□□□□ -1.29
SPG11-213ENST00000558988 RANBP9Q96S59 729 aa7.02□□□□□ -1.29
SPG11-213ENST00000558988 SELENOSQ9BQE4 189 aa7.02□□□□□ -1.29
SPG11-213ENST00000558988 ACAT2Q9BWD1 397 aa7.02□□□□□ -1.29
SPG11-213ENST00000558988 AP1M1Q9BXS5 423 aa7.02□□□□□ -1.29
SPG11-213ENST00000558988 FRMD8P1Q9BZ68 369 aaPredicted RBP7.02□□□□□ -1.29
SPG11-213ENST00000558988 EURLQ9NYK6 297 aa7.02□□□□□ -1.29
SPG11-213ENST00000558988 IL1RAPL1Q9NZN1 696 aa7.02□□□□□ -1.29
SPG11-213ENST00000558988 STOX2Q9P2F5 926 aaPredicted RBP7.02□□□□□ -1.29
SPG11-213ENST00000558988 GNPTGQ9UJJ9 305 aa7.02□□□□□ -1.29
SPG11-213ENST00000558988 CDC23Q9UJX2 597 aa7.02□□□□□ -1.29
SPG11-213ENST00000558988 SRPK3Q9UPE1 567 aa7.02□□□□□ -1.29
SPG11-213ENST00000558988 PLCL2Q9UPR0 1127 aa7.02□□□□□ -1.29
SPG11-213ENST00000558988 CRYL1Q9Y2S2 319 aa7.02□□□□□ -1.29
SPG11-213ENST00000558988 ZNF451Q9Y4E5 1061 aa7.02□□□□□ -1.29
SPG11-213ENST00000558988 MAU2Q9Y6X3 613 aa7.02□□□□□ -1.29
SPG11-213ENST00000558988 FER1L5A0AVI2 2057 aa7.02□□□□□ -1.29
SPG11-213ENST00000558988 SEC16AO15027 2179 aa7.02□□□□□ -1.29
SPG11-213ENST00000558988 TENM4Q6N022 2769 aa7.01□□□□□ -1.29
SPG11-213ENST00000558988 A0A0J9YVX5 310 aa7.01□□□□□ -1.29
SPG11-213ENST00000558988 TCRBV7S3A2A0A539 114 aa7.01□□□□□ -1.29
SPG11-213ENST00000558988 A1L4Q6 167 aa7.01□□□□□ -1.29
SPG11-213ENST00000558988 GOLGA8MH3BSY2 632 aa7.01□□□□□ -1.29
SPG11-213ENST00000558988 NRP2O60462 931 aa7.01□□□□□ -1.29
SPG11-213ENST00000558988 CNOT3O75175 753 aaKnown RBP7.01□□□□□ -1.29
SPG11-213ENST00000558988 NIPSNAP2O75323 286 aa7.01□□□□□ -1.29
SPG11-213ENST00000558988 AVILO75366 819 aa7.01□□□□□ -1.29
SPG11-213ENST00000558988 KLF7O75840 302 aaPredicted RBP7.01□□□□□ -1.29
SPG11-213ENST00000558988 UQCRHP07919 91 aa7.01□□□□□ -1.29
SPG11-213ENST00000558988 CHRM3P20309 590 aa7.01□□□□□ -1.29
SPG11-213ENST00000558988 ITGA3P26006 1051 aa7.01□□□□□ -1.29
SPG11-213ENST00000558988 OR1D4P47884 311 aa7.01□□□□□ -1.29
SPG11-213ENST00000558988 GABRA4P48169 554 aa7.01□□□□□ -1.29
SPG11-213ENST00000558988 VSX2P58304 361 aaPredicted RBP7.01□□□□□ -1.29
SPG11-213ENST00000558988 ACVR1Q04771 509 aa7.01□□□□□ -1.29
SPG11-213ENST00000558988 GPS1Q13098 491 aa7.01□□□□□ -1.29
SPG11-213ENST00000558988 MRPL49Q13405 166 aaKnown RBP7.01□□□□□ -1.29
SPG11-213ENST00000558988 SIX1Q15475 284 aaPredicted RBP7.01□□□□□ -1.29
SPG11-213ENST00000558988 INPP5JQ15735 1006 aaPredicted RBP7.01□□□□□ -1.29
SPG11-213ENST00000558988 CCNG2Q16589 344 aa7.01□□□□□ -1.29
SPG11-213ENST00000558988 RHBDD2Q6NTF9 364 aa7.01□□□□□ -1.29
SPG11-213ENST00000558988 JMJD6Q6NYC1 403 aaPredicted RBP7.01□□□□□ -1.29
SPG11-213ENST00000558988 TLDC1Q6P9B6 456 aa7.01□□□□□ -1.29
SPG11-213ENST00000558988 FIGLAQ6QHK4 219 aa7.01□□□□□ -1.29
SPG11-213ENST00000558988 UNC5DQ6UXZ4 953 aa7.01□□□□□ -1.29
SPG11-213ENST00000558988 MED25Q71SY5 747 aa7.01□□□□□ -1.29
SPG11-213ENST00000558988 DNAJC22Q8N4W6 341 aa7.01□□□□□ -1.29
SPG11-213ENST00000558988 RAB42Q8N4Z0 105 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms