RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 FLOT2Q14254 428 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 ZNF460Q14592 562 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 ACAP2Q15057 778 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 MMEL1Q495T6 779 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 RNF220Q5VTB9 566 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 LPCAT4Q643R3 524 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 PTRHD1Q6GMV3 140 aaKnown RBP9.92□□□□□ -0.82
TPM1-212ENST00000558347 TMEM207Q6UWW9 146 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 CEACAM20Q6UY09 585 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 HACD2Q6Y1H2 254 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 FAM92BQ6ZTR7 304 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 TIPARPQ7Z3E1 657 aaKnown RBP9.92□□□□□ -0.82
TPM1-212ENST00000558347 PRSS42Q7Z5A4 293 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 NKAPQ8N5F7 415 aaKnown RBP9.92□□□□□ -0.82
TPM1-212ENST00000558347 CD200R1Q8TD46 325 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 RNF31Q96EP0 1072 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 WBP1Q96G27 269 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 DCUN1D1Q96GG9 259 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 LRGUKQ96M69 825 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 C12orf66Q96MD2 445 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 CATSPER2Q96P56 530 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 TEFMQ96QE5 360 aaKnown RBP9.92□□□□□ -0.82
TPM1-212ENST00000558347 CDRT15Q96T59 188 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 GPR21Q99679 349 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 ZNF768Q9H5H4 540 aaKnown RBP9.92□□□□□ -0.82
TPM1-212ENST00000558347 MEAF6Q9HAF1 191 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 SLC24A3Q9HC58 644 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 PAPOLBQ9NRJ5 636 aaKnown RBP9.92□□□□□ -0.82
TPM1-212ENST00000558347 SUCOQ9UBS9 1254 aaKnown RBP9.92□□□□□ -0.82
TPM1-212ENST00000558347 TRMT6Q9UJA5 497 aaKnown RBP9.92□□□□□ -0.82
TPM1-212ENST00000558347 CNOT11Q9UKZ1 510 aaKnown RBP9.92□□□□□ -0.82
TPM1-212ENST00000558347 DHRS7Q9Y394 339 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 COPG1Q9Y678 874 aaKnown RBP9.92□□□□□ -0.82
TPM1-212ENST00000558347 PRSS21Q9Y6M0 314 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 FASNP49327 2511 aaKnown RBP9.92□□□□□ -0.82
TPM1-212ENST00000558347 PRSS51A0A1B0GVH4 220 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 SMIM31A0A1B0GVY4 71 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 E5RI56 91 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 POLR1CO15160 346 aaPredicted RBP9.92□□□□□ -0.82
TPM1-212ENST00000558347 TOX3O15405 576 aaPredicted RBP9.92□□□□□ -0.82
TPM1-212ENST00000558347 IPO13O94829 963 aaKnown RBP9.92□□□□□ -0.82
TPM1-212ENST00000558347 SORBS2O94875 1100 aaKnown RBP9.92□□□□□ -0.82
TPM1-212ENST00000558347 PABPC4LP0CB38 370 aaKnown RBP9.92□□□□□ -0.82
TPM1-212ENST00000558347 CCDC166P0CW27 439 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 LIFP15018 202 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 CHRM3P20309 590 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 PEX19P40855 299 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 GLRBP48167 497 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 CHN2P52757 468 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 PGGT1BP53609 377 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 NFKB2Q00653 900 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 FOXM1Q08050 763 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 TRAP1Q12931 704 aaKnown RBP9.92□□□□□ -0.82
TPM1-212ENST00000558347 PLCL1Q15111 1095 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 PDK3Q15120 406 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 LINC00303Q3SY05 128 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 ZNF658BQ4V348 819 aaPredicted RBP9.92□□□□□ -0.82
TPM1-212ENST00000558347 LIN52Q52LA3 116 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 CACHD1Q5VU97 1274 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 FOXB2Q5VYV0 432 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 NXNQ6DKJ4 435 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 TICAM1Q8IUC6 712 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 CFAP206Q8IYR0 622 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 ZNF843Q8N446 348 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 CLDN19Q8N6F1 224 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 IL22RA1Q8N6P7 574 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 CCNYL1Q8N7R7 359 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 HM13Q8TCT9 377 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 AGR3Q8TD06 166 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 ANKRD49Q8WVL7 239 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 KLHL6Q8WZ60 621 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 L3HYPDHQ96EM0 354 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 DUS3LQ96G46 650 aaKnown RBP9.92□□□□□ -0.82
TPM1-212ENST00000558347 PDLIM5Q96HC4 596 aaKnown RBP9.92□□□□□ -0.82
TPM1-212ENST00000558347 SH3GL3Q99963 347 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 MRPL1Q9BYD6 325 aaKnown RBP9.92□□□□□ -0.82
TPM1-212ENST00000558347 DERL2Q9GZP9 239 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 RAB33BQ9H082 229 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 EPHA6Q9UF33 1036 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 RIMS3Q9UJD0 308 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 ACSL5Q9ULC5 683 aa9.92□□□□□ -0.82
TPM1-212ENST00000558347 IGHV5-51A0A0C4DH38 117 aa9.91□□□□□ -0.82
TPM1-212ENST00000558347 LOC101059948A0A1B0GTJ6 334 aa9.91□□□□□ -0.82
TPM1-212ENST00000558347 KLHL33A6NCF5 533 aa9.91□□□□□ -0.82
TPM1-212ENST00000558347 EIF3FO00303 357 aaPredicted RBP9.91□□□□□ -0.82
TPM1-212ENST00000558347 ACOT8O14734 319 aa9.91□□□□□ -0.82
TPM1-212ENST00000558347 KPNA5O15131 536 aa9.91□□□□□ -0.82
TPM1-212ENST00000558347 STK17BO94768 372 aa9.91□□□□□ -0.82
TPM1-212ENST00000558347 DLGAP3O95886 979 aa9.91□□□□□ -0.82
TPM1-212ENST00000558347 GSTM1P09488 218 aa9.91□□□□□ -0.82
TPM1-212ENST00000558347 SLC35G4P0C7Q5 338 aa9.91□□□□□ -0.82
TPM1-212ENST00000558347 ZNF28P17035 718 aa9.91□□□□□ -0.82
TPM1-212ENST00000558347 ATP6V0D1P61421 351 aa9.91□□□□□ -0.82
TPM1-212ENST00000558347 GSTM4Q03013 218 aa9.91□□□□□ -0.82
TPM1-212ENST00000558347 FOLH1Q04609 750 aa9.91□□□□□ -0.82
TPM1-212ENST00000558347 CEACAM7Q14002 265 aa9.91□□□□□ -0.82
TPM1-212ENST00000558347 CSHL1Q14406 222 aa9.91□□□□□ -0.82
TPM1-212ENST00000558347 PDCD2Q16342 344 aaPredicted RBP9.91□□□□□ -0.82
TPM1-212ENST00000558347 GRAMD1BQ3KR37 738 aa9.91□□□□□ -0.82
TPM1-212ENST00000558347 PAQR3Q6TCH7 311 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms