RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 POLLQ9UGP5 575 aa2.77□□□□□ -1.97
SPG11-206ENST00000558093 RARRES3Q9UL19 164 aa2.77□□□□□ -1.97
SPG11-206ENST00000558093 ZNF510Q9Y2H8 683 aa2.77□□□□□ -1.97
SPG11-206ENST00000558093 NPHP3Q7Z494 1330 aa2.76□□□□□ -1.97
SPG11-206ENST00000558093 A0A1W2PPW3 197 aa2.76□□□□□ -1.97
SPG11-206ENST00000558093 ACOD1A6NK06 481 aa2.76□□□□□ -1.97
SPG11-206ENST00000558093 C17orf105B2RV13 164 aa2.76□□□□□ -1.97
SPG11-206ENST00000558093 K7EQD1 137 aa2.76□□□□□ -1.97
SPG11-206ENST00000558093 EEF1DP29692 281 aaKnown RBP2.76□□□□□ -1.97
SPG11-206ENST00000558093 TDO2P48775 406 aa2.76□□□□□ -1.97
SPG11-206ENST00000558093 MTCP1P56278 107 aa2.76□□□□□ -1.97
SPG11-206ENST00000558093 KRTAP10-3P60369 221 aa2.76□□□□□ -1.97
SPG11-206ENST00000558093 SRSF9Q13242 221 aaKnown RBP eCLIP2.76□□□□□ -1.97
SPG11-206ENST00000558093 CAMK2DQ13557 499 aa2.76□□□□□ -1.97
SPG11-206ENST00000558093 KYNUQ16719 465 aa2.76□□□□□ -1.97
SPG11-206ENST00000558093 HIGD2BQ4VC39 106 aa2.76□□□□□ -1.97
SPG11-206ENST00000558093 KRBOX4Q5JUW0 171 aa2.76□□□□□ -1.97
SPG11-206ENST00000558093 SUSD1Q6UWL2 747 aa2.76□□□□□ -1.97
SPG11-206ENST00000558093 SLC47A2Q86VL8 602 aa2.76□□□□□ -1.97
SPG11-206ENST00000558093 CCDC60Q8IWA6 550 aaPredicted RBP2.76□□□□□ -1.97
SPG11-206ENST00000558093 C17orf47Q8NEP4 570 aa2.76□□□□□ -1.97
SPG11-206ENST00000558093 OR52B6Q8NGF0 335 aa2.76□□□□□ -1.97
SPG11-206ENST00000558093 OR10G7Q8NGN6 311 aa2.76□□□□□ -1.97
SPG11-206ENST00000558093 RPLP0P6Q8NHW5 317 aa2.76□□□□□ -1.97
SPG11-206ENST00000558093 SLC26A7Q8TE54 656 aa2.76□□□□□ -1.97
SPG11-206ENST00000558093 SNRNP27Q8WVK2 155 aaKnown RBP2.76□□□□□ -1.97
SPG11-206ENST00000558093 EXT2Q93063 718 aa2.76□□□□□ -1.97
SPG11-206ENST00000558093 ZNF597Q96LX8 424 aa2.76□□□□□ -1.97
SPG11-206ENST00000558093 FAM218AQ96MZ4 157 aa2.76□□□□□ -1.97
SPG11-206ENST00000558093 SPATA33Q96N06 139 aa2.76□□□□□ -1.97
SPG11-206ENST00000558093 TXLNGYQ9BZA5 131 aa2.76□□□□□ -1.97
SPG11-206ENST00000558093 RAVER2Q9HCJ3 691 aaKnown RBP2.76□□□□□ -1.97
SPG11-206ENST00000558093 IL36AQ9UHA7 158 aa2.76□□□□□ -1.97
SPG11-206ENST00000558093 SLC12A6Q9UHW9 1150 aa2.76□□□□□ -1.97
SPG11-206ENST00000558093 AGRNO00468 2067 aa2.76□□□□□ -1.97
SPG11-206ENST00000558093 IL16Q14005 1332 aa2.75□□□□□ -1.97
SPG11-206ENST00000558093 IGHV4-30-2A0A087WSY4 118 aa2.75□□□□□ -1.97
SPG11-206ENST00000558093 IGKV6D-41A0A0C4DH26 115 aa2.75□□□□□ -1.97
SPG11-206ENST00000558093 IQCMA0A1B0GVH7 501 aa2.75□□□□□ -1.97
SPG11-206ENST00000558093 NPIPB9F8W1W9 429 aa2.75□□□□□ -1.97
SPG11-206ENST00000558093 UBE2CO00762 179 aa2.75□□□□□ -1.97
SPG11-206ENST00000558093 FIBPO43427 364 aa2.75□□□□□ -1.97
SPG11-206ENST00000558093 IGHDP01880 384 aa2.75□□□□□ -1.97
SPG11-206ENST00000558093 RPLP0P05388 317 aaKnown RBP2.75□□□□□ -1.97
SPG11-206ENST00000558093 CCDC175P0C221 793 aa2.75□□□□□ -1.97
SPG11-206ENST00000558093 F3P13726 295 aa2.75□□□□□ -1.97
SPG11-206ENST00000558093 KRT2P35908 639 aa2.75□□□□□ -1.97
SPG11-206ENST00000558093 PPP5CP53041 499 aa2.75□□□□□ -1.97
SPG11-206ENST00000558093 CLDN17P56750 224 aa2.75□□□□□ -1.97
SPG11-206ENST00000558093 TRA2AQ13595 282 aaKnown RBP eCLIP2.75□□□□□ -1.97
SPG11-206ENST00000558093 COG2Q14746 738 aa2.75□□□□□ -1.97
SPG11-206ENST00000558093 CDC37Q16543 378 aaPredicted RBP2.75□□□□□ -1.97
SPG11-206ENST00000558093 TCP11X2Q5H9J9 407 aa2.75□□□□□ -1.97
SPG11-206ENST00000558093 LRRC73Q5JTD7 316 aa2.75□□□□□ -1.97
SPG11-206ENST00000558093 PRSS55Q6UWB4 352 aaPredicted RBP2.75□□□□□ -1.97
SPG11-206ENST00000558093 ZNF841Q6ZN19 808 aa2.75□□□□□ -1.97
SPG11-206ENST00000558093 CHST3Q7LGC8 479 aa2.75□□□□□ -1.97
SPG11-206ENST00000558093 SH2D6Q7Z4S9 175 aa2.75□□□□□ -1.97
SPG11-206ENST00000558093 KRT77Q7Z794 578 aa2.75□□□□□ -1.97
SPG11-206ENST00000558093 PIGWQ7Z7B1 504 aa2.75□□□□□ -1.97
SPG11-206ENST00000558093 RPAINQ86UA6 219 aa2.75□□□□□ -1.97
SPG11-206ENST00000558093 SLC25A42Q86VD7 318 aa2.75□□□□□ -1.97
SPG11-206ENST00000558093 RNF130Q86XS8 419 aa2.75□□□□□ -1.97
SPG11-206ENST00000558093 SLC39A11Q8N1S5 342 aa2.75□□□□□ -1.97
SPG11-206ENST00000558093 ABHD12Q8N2K0 398 aa2.75□□□□□ -1.97
SPG11-206ENST00000558093 CHCHD4Q8N4Q1 142 aa2.75□□□□□ -1.97
SPG11-206ENST00000558093 TOMM40LQ969M1 308 aa2.75□□□□□ -1.97
SPG11-206ENST00000558093 VPS33AQ96AX1 596 aa2.75□□□□□ -1.97
SPG11-206ENST00000558093 PDLIM5Q96HC4 596 aaKnown RBP2.75□□□□□ -1.97
SPG11-206ENST00000558093 PSMB7Q99436 277 aa2.75□□□□□ -1.97
SPG11-206ENST00000558093 NDNQ99608 321 aa2.75□□□□□ -1.97
SPG11-206ENST00000558093 CHCHD5Q9BSY4 110 aa2.75□□□□□ -1.97
SPG11-206ENST00000558093 PI4K2AQ9BTU6 479 aa2.75□□□□□ -1.97
SPG11-206ENST00000558093 CENPOQ9BU64 300 aa2.75□□□□□ -1.97
SPG11-206ENST00000558093 SLC25A23Q9BV35 468 aa2.75□□□□□ -1.97
SPG11-206ENST00000558093 KATNB1Q9BVA0 655 aa2.75□□□□□ -1.97
SPG11-206ENST00000558093 FZD8Q9H461 694 aa2.75□□□□□ -1.97
SPG11-206ENST00000558093 HEXA-AS1Q9H8Q6 139 aa2.75□□□□□ -1.97
SPG11-206ENST00000558093 CTSZQ9UBR2 303 aa2.75□□□□□ -1.97
SPG11-206ENST00000558093 POLKQ9UBT6 870 aa2.75□□□□□ -1.97
SPG11-206ENST00000558093 TP53TG3Q9ULZ0 132 aa2.75□□□□□ -1.97
SPG11-206ENST00000558093 TTLL3Q9Y4R7 772 aa2.75□□□□□ -1.97
SPG11-206ENST00000558093 A0A087WZ39 114 aa2.74□□□□□ -1.97
SPG11-206ENST00000558093 A8MVM7 634 aa2.74□□□□□ -1.97
SPG11-206ENST00000558093 F8VVB4 439 aa2.74□□□□□ -1.97
SPG11-206ENST00000558093 F8VWA3 439 aa2.74□□□□□ -1.97
SPG11-206ENST00000558093 G3V2L1 256 aa2.74□□□□□ -1.97
SPG11-206ENST00000558093 YES1P07947 543 aa2.74□□□□□ -1.97
SPG11-206ENST00000558093 PIK3R1P27986 724 aa2.74□□□□□ -1.97
SPG11-206ENST00000558093 CLCN4P51793 760 aa2.74□□□□□ -1.97
SPG11-206ENST00000558093 SULT2A1Q06520 285 aa2.74□□□□□ -1.97
SPG11-206ENST00000558093 ZFP36L1Q07352 338 aaKnown RBP2.74□□□□□ -1.97
SPG11-206ENST00000558093 CD300CQ08708 224 aa2.74□□□□□ -1.97
SPG11-206ENST00000558093 WASHC5Q12768 1159 aa2.74□□□□□ -1.97
SPG11-206ENST00000558093 KIAA0141Q14154 515 aaPredicted RBP2.74□□□□□ -1.97
SPG11-206ENST00000558093 DUSP5Q16690 384 aa2.74□□□□□ -1.97
SPG11-206ENST00000558093 FAM106AQ4KMX7 169 aa2.74□□□□□ -1.97
SPG11-206ENST00000558093 SPECC1Q5M775 1068 aa2.74□□□□□ -1.97
SPG11-206ENST00000558093 FUT10Q6P4F1 479 aa2.74□□□□□ -1.97
SPG11-206ENST00000558093 C3P1Q6ZMU1 363 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms