RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 NDUFA9Q16795 377 aa11.88□□□□□ -0.51
TPM1-209ENST00000558072 XKR7Q5GH72 579 aa11.88□□□□□ -0.51
TPM1-209ENST00000558072 NKAIN2Q5VXU1 208 aa11.88□□□□□ -0.51
TPM1-209ENST00000558072 NXNQ6DKJ4 435 aa11.88□□□□□ -0.51
TPM1-209ENST00000558072 OGFOD2Q6N063 350 aa11.88□□□□□ -0.51
TPM1-209ENST00000558072 RNF44Q7L0R7 432 aa11.88□□□□□ -0.51
TPM1-209ENST00000558072 ASPGQ86U10 573 aa11.88□□□□□ -0.51
TPM1-209ENST00000558072 FAM20CQ8IXL6 584 aa11.88□□□□□ -0.51
TPM1-209ENST00000558072 DCBLD1Q8N8Z6 715 aa11.88□□□□□ -0.51
TPM1-209ENST00000558072 HUS1BQ8NHY5 278 aa11.88□□□□□ -0.51
TPM1-209ENST00000558072 NETO1Q8TDF5 533 aa11.88□□□□□ -0.51
TPM1-209ENST00000558072 KLHL6Q8WZ60 621 aa11.88□□□□□ -0.51
TPM1-209ENST00000558072 MAP3K3Q99759 626 aa11.88□□□□□ -0.51
TPM1-209ENST00000558072 TMEM120AQ9BXJ8 343 aa11.88□□□□□ -0.51
TPM1-209ENST00000558072 ZNF768Q9H5H4 540 aaKnown RBP11.88□□□□□ -0.51
TPM1-209ENST00000558072 SYNDIG1Q9H7V2 258 aa11.88□□□□□ -0.51
TPM1-209ENST00000558072 C1orf109Q9NX04 203 aa11.88□□□□□ -0.51
TPM1-209ENST00000558072 EIF3LQ9Y262 564 aaKnown RBP11.88□□□□□ -0.51
TPM1-209ENST00000558072 PCDHGA4Q9Y5G9 962 aa11.88□□□□□ -0.51
TPM1-209ENST00000558072 COL27A1Q8IZC6 1860 aaPredicted RBP11.87□□□□□ -0.51
TPM1-209ENST00000558072 IGKV1-8A0A0C4DH67 115 aa11.87□□□□□ -0.51
TPM1-209ENST00000558072 SLC9B1P1A6NJY1 282 aa11.87□□□□□ -0.51
TPM1-209ENST00000558072 NTN3O00634 580 aaPredicted RBP11.87□□□□□ -0.51
TPM1-209ENST00000558072 HAT1O14929 419 aa11.87□□□□□ -0.51
TPM1-209ENST00000558072 SLC22A2O15244 555 aa11.87□□□□□ -0.51
TPM1-209ENST00000558072 PRAMEF4O60810 478 aa11.87□□□□□ -0.51
TPM1-209ENST00000558072 CBFA2T3O75081 653 aa11.87□□□□□ -0.51
TPM1-209ENST00000558072 GUCY1B2O75343 617 aa11.87□□□□□ -0.51
TPM1-209ENST00000558072 LINC00032P0C843 101 aa11.87□□□□□ -0.51
TPM1-209ENST00000558072 CD22P20273 847 aa11.87□□□□□ -0.51
TPM1-209ENST00000558072 CSRP1P21291 193 aaKnown RBP11.87□□□□□ -0.51
TPM1-209ENST00000558072 SERPINB3P29508 390 aa11.87□□□□□ -0.51
TPM1-209ENST00000558072 IDH3AP50213 366 aa11.87□□□□□ -0.51
TPM1-209ENST00000558072 RAP1GDS1P52306 607 aa11.87□□□□□ -0.51
TPM1-209ENST00000558072 FOXA1P55317 472 aa11.87□□□□□ -0.51
TPM1-209ENST00000558072 STX1BP61266 288 aa11.87□□□□□ -0.51
TPM1-209ENST00000558072 ERVK-8P63133 956 aa11.87□□□□□ -0.51
TPM1-209ENST00000558072 ACSM2AQ08AH3 577 aa11.87□□□□□ -0.51
TPM1-209ENST00000558072 DDX39BQ13838 428 aaKnown RBP11.87□□□□□ -0.51
TPM1-209ENST00000558072 COL9A2Q14055 689 aaPredicted RBP11.87□□□□□ -0.51
TPM1-209ENST00000558072 ABRAXAS2Q15018 415 aa11.87□□□□□ -0.51
TPM1-209ENST00000558072 GSTA3Q16772 222 aa11.87□□□□□ -0.51
TPM1-209ENST00000558072 SGO1Q5FBB7 561 aa11.87□□□□□ -0.51
TPM1-209ENST00000558072 SPDYAQ5MJ70 313 aa11.87□□□□□ -0.51
TPM1-209ENST00000558072 DEPDC1Q5TB30 811 aa11.87□□□□□ -0.51
TPM1-209ENST00000558072 YOD1Q5VVQ6 348 aaPredicted RBP11.87□□□□□ -0.51
TPM1-209ENST00000558072 GARNL3Q5VVW2 1013 aa11.87□□□□□ -0.51
TPM1-209ENST00000558072 PRAMEF9Q5VWM5 478 aa11.87□□□□□ -0.51
TPM1-209ENST00000558072 ACSM2BQ68CK6 577 aa11.87□□□□□ -0.51
TPM1-209ENST00000558072 FCRL6Q6DN72 434 aa11.87□□□□□ -0.51
TPM1-209ENST00000558072 FAM92BQ6ZTR7 304 aa11.87□□□□□ -0.51
TPM1-209ENST00000558072 USP53Q70EK8 1073 aa11.87□□□□□ -0.51
TPM1-209ENST00000558072 ABHD13Q7L211 337 aa11.87□□□□□ -0.51
TPM1-209ENST00000558072 NT5CQ8TCD5 201 aa11.87□□□□□ -0.51
TPM1-209ENST00000558072 SLC13A3Q8WWT9 602 aa11.87□□□□□ -0.51
TPM1-209ENST00000558072 STARD8Q92502 1023 aa11.87□□□□□ -0.51
TPM1-209ENST00000558072 RGMAQ96B86 450 aa11.87□□□□□ -0.51
TPM1-209ENST00000558072 SLC41A2Q96JW4 573 aa11.87□□□□□ -0.51
TPM1-209ENST00000558072 PPM1MQ96MI6 270 aa11.87□□□□□ -0.51
TPM1-209ENST00000558072 KCNA7Q96RP8 456 aa11.87□□□□□ -0.51
TPM1-209ENST00000558072 STRADBQ9C0K7 418 aa11.87□□□□□ -0.51
TPM1-209ENST00000558072 CLK4Q9HAZ1 481 aaKnown RBP11.87□□□□□ -0.51
TPM1-209ENST00000558072 LRTM1Q9HBL6 345 aa11.87□□□□□ -0.51
TPM1-209ENST00000558072 DMRT3Q9NQL9 472 aa11.87□□□□□ -0.51
TPM1-209ENST00000558072 SIRT5Q9NXA8 310 aa11.87□□□□□ -0.51
TPM1-209ENST00000558072 SERTAD3Q9UJW9 196 aa11.87□□□□□ -0.51
TPM1-209ENST00000558072 ADAM29Q9UKF5 820 aa11.87□□□□□ -0.51
TPM1-209ENST00000558072 SLC12A4Q9UP95 1085 aa11.87□□□□□ -0.51
TPM1-209ENST00000558072 RUVBL1Q9Y265 456 aaKnown RBP11.87□□□□□ -0.51
TPM1-209ENST00000558072 ASCC3Q8N3C0 2202 aaKnown RBP11.87□□□□□ -0.51
TPM1-209ENST00000558072 SPAARA0A1B0GVQ0 90 aa11.86□□□□□ -0.51
TPM1-209ENST00000558072 ARHGAP10A1A4S6 786 aa11.86□□□□□ -0.51
TPM1-209ENST00000558072 TMEM233B4DJY2 109 aa11.86□□□□□ -0.51
TPM1-209ENST00000558072 SDHDO14521 159 aa11.86□□□□□ -0.51
TPM1-209ENST00000558072 ZNF195O14628 629 aa11.86□□□□□ -0.51
TPM1-209ENST00000558072 UBDO15205 165 aa11.86□□□□□ -0.51
TPM1-209ENST00000558072 SEC22BO75396 215 aa11.86□□□□□ -0.51
TPM1-209ENST00000558072 PRPS2P11908 318 aa11.86□□□□□ -0.51
TPM1-209ENST00000558072 IDO1P14902 403 aa11.86□□□□□ -0.51
TPM1-209ENST00000558072 ST6GAL1P15907 406 aa11.86□□□□□ -0.51
TPM1-209ENST00000558072 NELFEP18615 380 aaKnown RBP11.86□□□□□ -0.51
TPM1-209ENST00000558072 CSTF2P33240 577 aaKnown RBP eCLIP11.86□□□□□ -0.51
TPM1-209ENST00000558072 ACADVLP49748 655 aa11.86□□□□□ -0.51
TPM1-209ENST00000558072 YBX1P67809 324 aaKnown RBP11.86□□□□□ -0.51
TPM1-209ENST00000558072 EMX2Q04743 252 aa11.86□□□□□ -0.51
TPM1-209ENST00000558072 RPS6KA2Q15349 733 aa11.86□□□□□ -0.51
TPM1-209ENST00000558072 TRIP6Q15654 476 aaKnown RBP11.86□□□□□ -0.51
TPM1-209ENST00000558072 AP5B1Q2VPB7 878 aa11.86□□□□□ -0.51
TPM1-209ENST00000558072 FAM214AQ32MH5 1076 aa11.86□□□□□ -0.51
TPM1-209ENST00000558072 KHDRBS2Q5VWX1 349 aaKnown RBP11.86□□□□□ -0.51
TPM1-209ENST00000558072 FBXO42Q6P3S6 717 aa11.86□□□□□ -0.51
TPM1-209ENST00000558072 TLDC1Q6P9B6 456 aa11.86□□□□□ -0.51
TPM1-209ENST00000558072 TRIM40Q6P9F5 258 aa11.86□□□□□ -0.51
TPM1-209ENST00000558072 RBM44Q6ZP01 1051 aaKnown RBP11.86□□□□□ -0.51
TPM1-209ENST00000558072 LARP4Q71RC2 724 aaKnown RBP eCLIP11.86□□□□□ -0.519e-10■□□□□ 8.2
TPM1-209ENST00000558072 PIP4P1Q86T03 277 aa11.86□□□□□ -0.51
TPM1-209ENST00000558072 TRIM73Q86UV7 250 aa11.86□□□□□ -0.51
TPM1-209ENST00000558072 ALYREFQ86V81 257 aaKnown RBP11.86□□□□□ -0.51
TPM1-209ENST00000558072 ZFAND4Q86XD8 727 aa11.86□□□□□ -0.51
TPM1-209ENST00000558072 MCATQ8IVS2 390 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms