RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 ZNF33BQ06732 778 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 CSTF3Q12996 717 aaKnown RBP7.09□□□□□ -1.27
SPG11-204ENST00000557866 DDX39BQ13838 428 aaKnown RBP7.09□□□□□ -1.27
SPG11-204ENST00000557866 LRRC32Q14392 662 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 CAPRIN1Q14444 709 aaKnown RBP7.09□□□□□ -1.27
SPG11-204ENST00000557866 UBXN2BQ14CS0 331 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 RCN1Q15293 331 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 TCEA2Q15560 299 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 SF1Q15637 639 aaKnown RBP7.09□□□□□ -1.27
SPG11-204ENST00000557866 TIGD2Q4W5G0 525 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 HABP4Q5JVS0 413 aaKnown RBP7.09□□□□□ -1.27
SPG11-204ENST00000557866 PRAMEF14Q5SWL7 426 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 PRAMEF13Q5VWM6 474 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 PEAR1Q5VY43 1037 aaPredicted RBP7.09□□□□□ -1.27
SPG11-204ENST00000557866 NOXRED1Q6NXP6 359 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 FDX2Q6P4F2 183 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 SLC2A7Q6PXP3 512 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 DLEU7Q6UYE1 221 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 RNF111Q6ZNA4 994 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 Q6ZSR6 202 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 ABI3BPQ7Z7G0 1075 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 FAM129CQ86XR2 697 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 NRROSQ86YC3 692 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 ADHFE1Q8IWW8 467 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 HOMEZQ8IX15 550 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 FAM20CQ8IXL6 584 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 SLC15A3Q8IY34 581 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 LAS2Q8IYD9 372 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 SLC22A18ASQ8N1D0 253 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 DEFB123Q8N688 67 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 KRTCAP2Q8N6L1 136 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 RNF148Q8N7C7 305 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 PCYOX1LQ8NBM8 494 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 FAM156AQ8NDB6 213 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 ZNF740Q8NDX6 193 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 TSTD1Q8NFU3 115 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 CLHC1Q8NHS4 586 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 HUS1BQ8NHY5 278 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 CHTF18Q8WVB6 975 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 RLN3Q8WXF3 142 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 ROPN1LQ96C74 230 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 BIRC7Q96CA5 298 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 C11orf24Q96F05 449 aaPredicted RBP7.09□□□□□ -1.27
SPG11-204ENST00000557866 CAMK1GQ96NX5 476 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 MTERF1Q99551 399 aaKnown RBP7.09□□□□□ -1.27
SPG11-204ENST00000557866 ACAT2Q9BWD1 397 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 GPR174Q9BXC1 333 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 TMEM168Q9H0V1 697 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 CLMPQ9H6B4 373 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 XKR8Q9H6D3 395 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 C7orf69Q9H7B7 122 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 IL1RL2Q9HB29 575 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 CCDC177Q9NQR7 707 aaPredicted RBP7.09□□□□□ -1.27
SPG11-204ENST00000557866 GPR27Q9NS67 375 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 CMTM6Q9NX76 183 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 NDE1Q9NXR1 346 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 ADA2Q9NZK5 511 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 SPATA7Q9P0W8 599 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 ABCD2Q9UBJ2 740 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 WNT16Q9UBV4 365 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 PPT2Q9UMR5 302 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 HIF3AQ9Y2N7 669 aa7.09□□□□□ -1.27
SPG11-204ENST00000557866 IGHV1OR15-9A0A0B4J2B8 117 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 PIPSLA2A3N6 862 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 A6NCN8 305 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 PDZK1P1A8MUH7 402 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 H0Y3Z8 333 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 PRAMEF26H0Y7S4 382 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 FOXE1O00358 373 aaPredicted RBP7.08□□□□□ -1.28
SPG11-204ENST00000557866 TRIM38O00635 465 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 NME4O00746 187 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 TNFRSF10CO14798 259 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 ANGPT2O15123 496 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 PRICKLE3O43900 615 aaPredicted RBP7.08□□□□□ -1.28
SPG11-204ENST00000557866 SH3BGRLO75368 114 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 RASGRP1O95267 797 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 TBX6O95947 436 aaPredicted RBP7.08□□□□□ -1.28
SPG11-204ENST00000557866 MTHFD1P11586 935 aaKnown RBP7.08□□□□□ -1.28
SPG11-204ENST00000557866 HSD3B1P14060 373 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 IDSP22304 550 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 ME2P23368 584 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 SLC6A2P23975 617 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 HSD3B2P26439 372 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 PSMB5P28074 263 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 PEBP1P30086 187 aaKnown RBP7.08□□□□□ -1.28
SPG11-204ENST00000557866 CD6P30203 668 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 OXTRP30559 389 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 PKLRP30613 574 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 SSTR4P31391 388 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 HSD17B2P37059 387 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 PXNP49023 591 aaPredicted RBP7.08□□□□□ -1.28
SPG11-204ENST00000557866 SLC7A2P52569 658 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 SRP54P61011 504 aaKnown RBP7.08□□□□□ -1.28
SPG11-204ENST00000557866 YPEL5P62699 121 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 MEF2AQ02078 507 aaPredicted RBP7.08□□□□□ -1.28
SPG11-204ENST00000557866 EIF2B5Q13144 721 aaKnown RBP7.08□□□□□ -1.28
SPG11-204ENST00000557866 MAD2L1Q13257 205 aaPredicted RBP7.08□□□□□ -1.28
SPG11-204ENST00000557866 NFYCQ13952 458 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 UAP1L1Q3KQV9 507 aa7.08□□□□□ -1.28
SPG11-204ENST00000557866 SPANXN4Q5MJ08 99 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms