RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 ZNF215Q9UL58 517 aaPredicted RBP1.73□□□□□ -2.13
FOXN3-216ENST00000557496 AUP1Q9Y679 476 aa1.73□□□□□ -2.13
FOXN3-216ENST00000557496 hCG_38984A0A1B0GV85 526 aa1.72□□□□□ -2.13
FOXN3-216ENST00000557496 TRIM77I1YAP6 450 aa1.72□□□□□ -2.13
FOXN3-216ENST00000557496 RTCAO00442 366 aaKnown RBP1.72□□□□□ -2.13
FOXN3-216ENST00000557496 IPO8O15397 1037 aaKnown RBP1.72□□□□□ -2.13
FOXN3-216ENST00000557496 TNFSF12O43508 249 aa1.72□□□□□ -2.13
FOXN3-216ENST00000557496 ATP6AP2O75787 350 aa1.72□□□□□ -2.13
FOXN3-216ENST00000557496 SEMA4FO95754 770 aa1.72□□□□□ -2.13
FOXN3-216ENST00000557496 C9P02748 559 aa1.72□□□□□ -2.13
FOXN3-216ENST00000557496 CSN3P07498 182 aa1.72□□□□□ -2.13
FOXN3-216ENST00000557496 SAGP10523 405 aaPredicted RBP1.72□□□□□ -2.13
FOXN3-216ENST00000557496 CD22P20273 847 aa1.72□□□□□ -2.13
FOXN3-216ENST00000557496 CETN2P41208 172 aa1.72□□□□□ -2.13
FOXN3-216ENST00000557496 PSMC6P62333 389 aa1.72□□□□□ -2.13
FOXN3-216ENST00000557496 ITPK1Q13572 414 aa1.72□□□□□ -2.13
FOXN3-216ENST00000557496 BAATQ14032 418 aaPredicted RBP1.72□□□□□ -2.13
FOXN3-216ENST00000557496 TTC31Q49AM3 519 aaPredicted RBP1.72□□□□□ -2.13
FOXN3-216ENST00000557496 NHLRC3Q5JS37 347 aa1.72□□□□□ -2.13
FOXN3-216ENST00000557496 FGD3Q5JSP0 725 aa1.72□□□□□ -2.13
FOXN3-216ENST00000557496 CYB5D1Q6P9G0 228 aa1.72□□□□□ -2.13
FOXN3-216ENST00000557496 EMBQ6PCB8 327 aa1.72□□□□□ -2.13
FOXN3-216ENST00000557496 PRSS55Q6UWB4 352 aaPredicted RBP1.72□□□□□ -2.13
FOXN3-216ENST00000557496 CPEB2Q7Z5Q1 589 aaKnown RBP1.72□□□□□ -2.13
FOXN3-216ENST00000557496 C17orf53Q8N3J3 647 aaPredicted RBP1.72□□□□□ -2.13
FOXN3-216ENST00000557496 RYBPQ8N488 228 aaPredicted RBP1.72□□□□□ -2.13
FOXN3-216ENST00000557496 GBP7Q8N8V2 638 aaPredicted RBP1.72□□□□□ -2.13
FOXN3-216ENST00000557496 OR5M9Q8NGP3 310 aa1.72□□□□□ -2.13
FOXN3-216ENST00000557496 KIAA1524Q8TCG1 905 aa1.72□□□□□ -2.13
FOXN3-216ENST00000557496 KCNE4Q8WWG9 221 aa1.72□□□□□ -2.13
FOXN3-216ENST00000557496 CASP10Q92851 521 aa1.72□□□□□ -2.13
FOXN3-216ENST00000557496 TEX12Q9BXU0 123 aa1.72□□□□□ -2.13
FOXN3-216ENST00000557496 MRPL1Q9BYD6 325 aaKnown RBP1.72□□□□□ -2.13
FOXN3-216ENST00000557496 STRADBQ9C0K7 418 aa1.72□□□□□ -2.13
FOXN3-216ENST00000557496 GOLPH3LQ9H4A5 285 aa1.72□□□□□ -2.13
FOXN3-216ENST00000557496 ANKZF1Q9H8Y5 726 aa1.72□□□□□ -2.13
FOXN3-216ENST00000557496 IL36AQ9UHA7 158 aa1.72□□□□□ -2.13
FOXN3-216ENST00000557496 CPSF3Q9UKF6 684 aaKnown RBP1.72□□□□□ -2.13
FOXN3-216ENST00000557496 NPHP3Q7Z494 1330 aa1.71□□□□□ -2.14
FOXN3-216ENST00000557496 MYH14Q7Z406 1995 aaKnown RBP1.71□□□□□ -2.14
FOXN3-216ENST00000557496 TRAV24A0A0B4J272 114 aa1.71□□□□□ -2.14
FOXN3-216ENST00000557496 MAGEB2O15479 319 aa1.71□□□□□ -2.14
FOXN3-216ENST00000557496 TPD52L2O43399 206 aaKnown RBP1.71□□□□□ -2.14
FOXN3-216ENST00000557496 EPB41L2O43491 1005 aaKnown RBP1.71□□□□□ -2.14
FOXN3-216ENST00000557496 HOXC4P09017 264 aaPredicted RBP1.71□□□□□ -2.14
FOXN3-216ENST00000557496 QDPRP09417 244 aa1.71□□□□□ -2.14
FOXN3-216ENST00000557496 CD59P13987 128 aa1.71□□□□□ -2.14
FOXN3-216ENST00000557496 ZNF32P17041 273 aa1.71□□□□□ -2.14
FOXN3-216ENST00000557496 RPL34P49207 117 aaKnown RBP1.71□□□□□ -2.14
FOXN3-216ENST00000557496 ASCL1P50553 236 aa1.71□□□□□ -2.14
FOXN3-216ENST00000557496 CYLC2Q14093 348 aaPredicted RBP1.71□□□□□ -2.14
FOXN3-216ENST00000557496 NTRK2Q16620 822 aa1.71□□□□□ -2.14
FOXN3-216ENST00000557496 TMEM44Q2T9K0 475 aa1.71□□□□□ -2.14
FOXN3-216ENST00000557496 TIMM50Q3ZCQ8 353 aa1.71□□□□□ -2.14
FOXN3-216ENST00000557496 MARC1Q5VT66 337 aa1.71□□□□□ -2.14
FOXN3-216ENST00000557496 LRRC49Q8IUZ0 686 aa1.71□□□□□ -2.14
FOXN3-216ENST00000557496 CCDC60Q8IWA6 550 aaPredicted RBP1.71□□□□□ -2.14
FOXN3-216ENST00000557496 OR4C15Q8NGM1 316 aa1.71□□□□□ -2.14
FOXN3-216ENST00000557496 FLVCR1-AS1Q8TAF5 88 aa1.71□□□□□ -2.14
FOXN3-216ENST00000557496 ESAMQ96AP7 390 aa1.71□□□□□ -2.14
FOXN3-216ENST00000557496 TMCO6Q96DC7 493 aa1.71□□□□□ -2.14
FOXN3-216ENST00000557496 ZNF830Q96NB3 372 aaPredicted RBP1.71□□□□□ -2.14
FOXN3-216ENST00000557496 NEDD4LQ96PU5 975 aa1.71□□□□□ -2.14
FOXN3-216ENST00000557496 RANBP9Q96S59 729 aa1.71□□□□□ -2.14
FOXN3-216ENST00000557496 CPNE1Q99829 537 aa1.71□□□□□ -2.14
FOXN3-216ENST00000557496 SDCBP2Q9H190 292 aa1.71□□□□□ -2.14
FOXN3-216ENST00000557496 ACTL8Q9H568 366 aa1.71□□□□□ -2.14
FOXN3-216ENST00000557496 GIMAP4Q9NUV9 329 aa1.71□□□□□ -2.14
FOXN3-216ENST00000557496 IL17CQ9P0M4 197 aa1.71□□□□□ -2.14
FOXN3-216ENST00000557496 DDX25Q9UHL0 483 aaKnown RBP1.71□□□□□ -2.14
FOXN3-216ENST00000557496 SLC24A2Q9UI40 661 aa1.71□□□□□ -2.14
FOXN3-216ENST00000557496 FBXL4Q9UKA2 621 aa1.71□□□□□ -2.14
FOXN3-216ENST00000557496 GON4LQ3T8J9 2241 aa1.71□□□□□ -2.14
FOXN3-216ENST00000557496 IL16Q14005 1332 aa1.7□□□□□ -2.14
FOXN3-216ENST00000557496 RNF123Q5XPI4 1314 aa1.7□□□□□ -2.14
FOXN3-216ENST00000557496 TDRD6O60522 2096 aaKnown RBP1.7□□□□□ -2.14
FOXN3-216ENST00000557496 WI2-2373I1.2A0A1W2PRP0 233 aa1.7□□□□□ -2.14
FOXN3-216ENST00000557496 NKX6-3A6NJ46 265 aa1.7□□□□□ -2.14
FOXN3-216ENST00000557496 DOK2O60496 412 aa1.7□□□□□ -2.14
FOXN3-216ENST00000557496 ZNF253O75346 499 aa1.7□□□□□ -2.14
FOXN3-216ENST00000557496 ENTPD3O75355 529 aa1.7□□□□□ -2.14
FOXN3-216ENST00000557496 RPS6KA5O75582 802 aa1.7□□□□□ -2.14
FOXN3-216ENST00000557496 GJB3O75712 270 aa1.7□□□□□ -2.14
FOXN3-216ENST00000557496 KBTBD11O94819 623 aa1.7□□□□□ -2.14
FOXN3-216ENST00000557496 UMPSP11172 480 aa1.7□□□□□ -2.14
FOXN3-216ENST00000557496 F3P13726 295 aa1.7□□□□□ -2.14
FOXN3-216ENST00000557496 CYP11B2P19099 503 aa1.7□□□□□ -2.14
FOXN3-216ENST00000557496 SAT1P21673 171 aa1.7□□□□□ -2.14
FOXN3-216ENST00000557496 RGRP47804 291 aa1.7□□□□□ -2.14
FOXN3-216ENST00000557496 NAP1L1P55209 391 aaKnown RBP1.7□□□□□ -2.14
FOXN3-216ENST00000557496 POLR2LP62875 67 aaKnown RBP1.7□□□□□ -2.14
FOXN3-216ENST00000557496 NONOQ15233 471 aaKnown RBP eCLIP1.7□□□□□ -2.14
FOXN3-216ENST00000557496 SPANXN4Q5MJ08 99 aa1.7□□□□□ -2.14
FOXN3-216ENST00000557496 KRTAP5-7Q6L8G8 165 aa1.7□□□□□ -2.14
FOXN3-216ENST00000557496 FAM180BQ6P0A1 224 aa1.7□□□□□ -2.14
FOXN3-216ENST00000557496 RPAP2Q8IXW5 612 aaPredicted RBP1.7□□□□□ -2.14
FOXN3-216ENST00000557496 APPL2Q8NEU8 664 aa1.7□□□□□ -2.14
FOXN3-216ENST00000557496 PRPF31Q8WWY3 499 aaKnown RBP1.7□□□□□ -2.14
FOXN3-216ENST00000557496 PROX1Q92786 737 aa1.7□□□□□ -2.14
FOXN3-216ENST00000557496 PTERQ96BW5 349 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms