RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 FBXW8Q8N3Y1 598 aa8.72□□□□□ -1.01
NEDD1-211ENST00000557454 TMEM156Q8N614 296 aa8.72□□□□□ -1.01
NEDD1-211ENST00000557454 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.72□□□□□ -1.01
NEDD1-211ENST00000557454 OR2L8Q8NGY9 312 aa8.72□□□□□ -1.01
NEDD1-211ENST00000557454 TMEM160Q9NX00 188 aa8.72□□□□□ -1.01
NEDD1-211ENST00000557454 HACD3Q9P035 362 aa8.72□□□□□ -1.01
NEDD1-211ENST00000557454 JKAMPQ9P055 326 aa8.72□□□□□ -1.01
NEDD1-211ENST00000557454 HCN3Q9P1Z3 774 aa8.72□□□□□ -1.01
NEDD1-211ENST00000557454 PCDHA3Q9Y5H8 950 aa8.72□□□□□ -1.01
NEDD1-211ENST00000557454 KLK4Q9Y5K2 254 aa8.72□□□□□ -1.01
NEDD1-211ENST00000557454 ARL5AQ9Y689 179 aa8.72□□□□□ -1.01
NEDD1-211ENST00000557454 NFS1Q9Y697 457 aa8.72□□□□□ -1.01
NEDD1-211ENST00000557454 KIAA1549Q9HCM3 1950 aa8.72□□□□□ -1.01
NEDD1-211ENST00000557454 FEZF1A0PJY2 475 aa8.71□□□□□ -1.02
NEDD1-211ENST00000557454 LIN7AO14910 233 aaPredicted RBP8.71□□□□□ -1.02
NEDD1-211ENST00000557454 CTIFO43310 598 aaKnown RBP8.71□□□□□ -1.02
NEDD1-211ENST00000557454 IL2RAP01589 272 aa8.71□□□□□ -1.02
NEDD1-211ENST00000557454 KLK7P49862 253 aa8.71□□□□□ -1.02
NEDD1-211ENST00000557454 OR4D2P58180 307 aa8.71□□□□□ -1.02
NEDD1-211ENST00000557454 POLR2FP61218 127 aaKnown RBP8.71□□□□□ -1.02
NEDD1-211ENST00000557454 XIAPP98170 497 aa8.71□□□□□ -1.02
NEDD1-211ENST00000557454 GRB7Q14451 532 aa8.71□□□□□ -1.02
NEDD1-211ENST00000557454 SIX1Q15475 284 aaPredicted RBP8.71□□□□□ -1.02
NEDD1-211ENST00000557454 NSDHLQ15738 373 aa8.71□□□□□ -1.02
NEDD1-211ENST00000557454 NDUFAF5Q5TEU4 345 aa8.71□□□□□ -1.02
NEDD1-211ENST00000557454 GARNL3Q5VVW2 1013 aa8.71□□□□□ -1.02
NEDD1-211ENST00000557454 DESI1Q6ICB0 168 aa8.71□□□□□ -1.02
NEDD1-211ENST00000557454 IL17RELQ6ZVW7 336 aa8.71□□□□□ -1.02
NEDD1-211ENST00000557454 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.71□□□□□ -1.02
NEDD1-211ENST00000557454 CLDN19Q8N6F1 224 aa8.71□□□□□ -1.02
NEDD1-211ENST00000557454 ARIH2OSQ8N7S6 290 aa8.71□□□□□ -1.02
NEDD1-211ENST00000557454 OR4K2Q8NGD2 314 aa8.71□□□□□ -1.02
NEDD1-211ENST00000557454 OR9A4Q8NGU2 314 aa8.71□□□□□ -1.02
NEDD1-211ENST00000557454 ULK4Q96C45 1275 aa8.71□□□□□ -1.02
NEDD1-211ENST00000557454 FICDQ9BVA6 458 aa8.71□□□□□ -1.02
NEDD1-211ENST00000557454 RAB11FIP5Q9BXF6 653 aa8.71□□□□□ -1.02
NEDD1-211ENST00000557454 RBCK1Q9BYM8 510 aa8.71□□□□□ -1.02
NEDD1-211ENST00000557454 HOOK1Q9UJC3 728 aaKnown RBP8.71□□□□□ -1.02
NEDD1-211ENST00000557454 RAI1Q7Z5J4 1906 aaPredicted RBP8.7□□□□□ -1.02
NEDD1-211ENST00000557454 IGLV3-16A0A075B6K0 115 aa8.7□□□□□ -1.02
NEDD1-211ENST00000557454 TRGV5A0A0B4J1U4 118 aa8.7□□□□□ -1.02
NEDD1-211ENST00000557454 LOC285095A0A1B0GVY8 99 aa8.7□□□□□ -1.02
NEDD1-211ENST00000557454 OR2A25A4D2G3 310 aa8.7□□□□□ -1.02
NEDD1-211ENST00000557454 AGAP14A8MT82 685 aa8.7□□□□□ -1.02
NEDD1-211ENST00000557454 TMCO5BA8MYB1 307 aa8.7□□□□□ -1.02
NEDD1-211ENST00000557454 EPHB6O15197 1021 aa8.7□□□□□ -1.02
NEDD1-211ENST00000557454 P2RX6O15547 441 aa8.7□□□□□ -1.02
NEDD1-211ENST00000557454 CDC123O75794 336 aaPredicted RBP8.7□□□□□ -1.02
NEDD1-211ENST00000557454 FKBP9O95302 570 aa8.7□□□□□ -1.02
NEDD1-211ENST00000557454 EPPINO95925 133 aa8.7□□□□□ -1.02
NEDD1-211ENST00000557454 TIMP3P35625 211 aa8.7□□□□□ -1.02
NEDD1-211ENST00000557454 AVPR1BP47901 424 aa8.7□□□□□ -1.02
NEDD1-211ENST00000557454 CPA2P48052 419 aa8.7□□□□□ -1.02
NEDD1-211ENST00000557454 WNT3AP56704 352 aa8.7□□□□□ -1.02
NEDD1-211ENST00000557454 OCRLQ01968 901 aa8.7□□□□□ -1.02
NEDD1-211ENST00000557454 RHAGQ02094 409 aa8.7□□□□□ -1.02
NEDD1-211ENST00000557454 SLC25A11Q02978 314 aaKnown RBP8.7□□□□□ -1.02
NEDD1-211ENST00000557454 PPIDQ08752 370 aaKnown RBP8.7□□□□□ -1.02
NEDD1-211ENST00000557454 DPYSL3Q14195 570 aa8.7□□□□□ -1.02
NEDD1-211ENST00000557454 MSS51Q4VC12 460 aa8.7□□□□□ -1.02
NEDD1-211ENST00000557454 SYTL3Q4VX76 610 aa8.7□□□□□ -1.02
NEDD1-211ENST00000557454 MIDNQ504T8 468 aa8.7□□□□□ -1.02
NEDD1-211ENST00000557454 PRSS41Q7RTY9 318 aa8.7□□□□□ -1.02
NEDD1-211ENST00000557454 BTLAQ7Z6A9 289 aa8.7□□□□□ -1.02
NEDD1-211ENST00000557454 LUZP2Q86TE4 346 aa8.7□□□□□ -1.02
NEDD1-211ENST00000557454 LACC1Q8IV20 430 aa8.7□□□□□ -1.02
NEDD1-211ENST00000557454 OR2L3Q8NG85 312 aa8.7□□□□□ -1.02
NEDD1-211ENST00000557454 OR51Q1Q8NH59 317 aa8.7□□□□□ -1.02
NEDD1-211ENST00000557454 HEXDCQ8WVB3 486 aa8.7□□□□□ -1.02
NEDD1-211ENST00000557454 ELMO1Q92556 727 aa8.7□□□□□ -1.02
NEDD1-211ENST00000557454 C1orf159Q96HA4 380 aa8.7□□□□□ -1.02
NEDD1-211ENST00000557454 AGPAT1Q99943 283 aa8.7□□□□□ -1.02
NEDD1-211ENST00000557454 GLOD4Q9HC38 313 aa8.7□□□□□ -1.02
NEDD1-211ENST00000557454 PSD3Q9NYI0 1048 aa8.7□□□□□ -1.02
NEDD1-211ENST00000557454 NDRG3Q9UGV2 375 aa8.7□□□□□ -1.02
NEDD1-211ENST00000557454 RWDD2AQ9UIY3 292 aa8.7□□□□□ -1.02
NEDD1-211ENST00000557454 ERVK-11Q9UQG0 969 aa8.7□□□□□ -1.02
NEDD1-211ENST00000557454 ARHGAP21Q5T5U3 1957 aa8.7□□□□□ -1.02
NEDD1-211ENST00000557454 FREM1Q5H8C1 2179 aa8.69□□□□□ -1.02
NEDD1-211ENST00000557454 C2orf81A6NN90 581 aa8.69□□□□□ -1.02
NEDD1-211ENST00000557454 HCN1O60741 890 aa8.69□□□□□ -1.02
NEDD1-211ENST00000557454 VPS26AO75436 327 aa8.69□□□□□ -1.02
NEDD1-211ENST00000557454 ITGA10O75578 1167 aa8.69□□□□□ -1.02
NEDD1-211ENST00000557454 GSTM1P09488 218 aa8.69□□□□□ -1.02
NEDD1-211ENST00000557454 ITGALP20701 1170 aa8.69□□□□□ -1.02
NEDD1-211ENST00000557454 CTSSP25774 331 aa8.69□□□□□ -1.02
NEDD1-211ENST00000557454 ACVR1BP36896 505 aa8.69□□□□□ -1.02
NEDD1-211ENST00000557454 CDKN1CP49918 316 aaPredicted RBP8.69□□□□□ -1.02
NEDD1-211ENST00000557454 CSE1LP55060 971 aaKnown RBP8.69□□□□□ -1.02
NEDD1-211ENST00000557454 CASP9P55211 416 aa8.69□□□□□ -1.02
NEDD1-211ENST00000557454 ADARP55265 1226 aaKnown RBP8.69□□□□□ -1.02
NEDD1-211ENST00000557454 GSTM4Q03013 218 aa8.69□□□□□ -1.02
NEDD1-211ENST00000557454 SLC10A1Q14973 349 aa8.69□□□□□ -1.02
NEDD1-211ENST00000557454 PDCD2Q16342 344 aaPredicted RBP8.69□□□□□ -1.02
NEDD1-211ENST00000557454 HSP90AA4PQ58FG1 418 aa8.69□□□□□ -1.02
NEDD1-211ENST00000557454 GK5Q6ZS86 529 aa8.69□□□□□ -1.02
NEDD1-211ENST00000557454 DCUN1D3Q8IWE4 304 aa8.69□□□□□ -1.02
NEDD1-211ENST00000557454 PLD6Q8N2A8 252 aaKnown RBP8.69□□□□□ -1.02
NEDD1-211ENST00000557454 ARMC10Q8N2F6 343 aa8.69□□□□□ -1.02
NEDD1-211ENST00000557454 DEFB126Q9BYW3 111 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms