RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 PCSK5Q92824 1860 aa10.08□□□□□ -0.8
HNRNPC-232ENST00000557442 LRRC14BA6NHZ5 514 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 GLRA3O75311 464 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 H2AFYO75367 372 aaKnown RBP10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 CREG1O75629 220 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 SIX3O95343 332 aaPredicted RBP10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 CAPN1P07384 714 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 GSTA1P08263 222 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 RAB40ALP0C0E4 278 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 PIM1P11309 404 aaPredicted RBP10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 EPB42P16452 691 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 EPORP19235 508 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 FBLP22087 321 aaKnown RBP10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 CXCR2P25025 360 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 EEF1DP29692 281 aaKnown RBP10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 AHRP35869 848 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 SCTRP47872 440 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 OR1D4P47884 311 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 MC1RQ01726 317 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 IRF8Q02556 426 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 ERV3-1Q14264 604 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 RBBP5Q15291 538 aaKnown RBP10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 NDUFA9Q16795 377 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 ATP1A1-AS1Q5TC04 95 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 FAM69BQ5VUD6 431 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 GARNL3Q5VVW2 1013 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 PRMT9Q6P2P2 845 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 TMIGD1Q6UXZ0 262 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 KRT78Q8N1N4 520 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 TEX9Q8N6V9 391 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 ANKRD53Q8N9V6 530 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 KCT2Q8NC54 265 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 SNRNP27Q8WVK2 155 aaKnown RBP10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 SLC13A3Q8WWT9 602 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 COL26A1Q96A83 441 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 PHF21BQ96EK2 531 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 PTCD3Q96EY7 689 aaKnown RBP10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 EFCAB11Q9BUY7 163 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 EHD1Q9H4M9 534 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 ZNF304Q9HCX3 659 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 TMEM216Q9P0N5 145 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 ZFP69BQ9UJL9 534 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 FARSAQ9Y285 508 aaKnown RBP10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 MRPS2Q9Y399 296 aaKnown RBP10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 TNPO3Q9Y5L0 923 aaKnown RBP10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 CROCCQ5TZA2 2017 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 A0A0A6YYC8 382 aaPredicted RBP10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 CDC14CA4D256 554 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 STX16-NPEPL1H3BU86 382 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 I3L1I5 382 aaPredicted RBP10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 STX16O14662 325 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 NKX2-8O15522 239 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 PRPF4O43172 522 aaKnown RBP eCLIP10.07□□□□□ -0.81e-7■□□□□ 8.5
HNRNPC-232ENST00000557442 PRAMEF4O60810 478 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 ERLIN1O75477 346 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 IL1RNP18510 177 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 TAC1P20366 129 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 ARL1P40616 181 aaPredicted RBP10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 FOLR3P41439 243 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 PIK3CGP48736 1102 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 RGS1Q08116 209 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 CHIT1Q13231 466 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 IL10RAQ13651 578 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 GTF2H2Q13888 395 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 DOC2AQ14183 400 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 PCBP2Q15366 365 aaKnown RBP eCLIP10.07□□□□□ -0.82e-70■■■□□ 16.7
HNRNPC-232ENST00000557442 PAGE2BQ5JRK9 111 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 PRAMEF9Q5VWM5 478 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 TMEM214Q6NUQ4 689 aaKnown RBP10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 GTF2H2CQ6P1K8 395 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 COX15Q7KZN9 410 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 GOLGA7Q7Z5G4 137 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 SYVN1Q86TM6 617 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 MYLK4Q86YV6 388 aaPredicted RBP10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 C4orf33Q8N1A6 199 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 ARHGEF39Q8N4T4 335 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 CCT6BQ92526 530 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 FKBP10Q96AY3 582 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 TM4SF19Q96DZ7 209 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 MOCOSQ96EN8 888 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 WDR34Q96EX3 536 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 MVB12AQ96EY5 273 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 MMABQ96EY8 250 aaPredicted RBP10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 MS4A3Q96HJ5 214 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 FAM117AQ9C073 453 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 PRM3Q9NNZ6 103 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 SLC22A11Q9NSA0 550 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 CTSFQ9UBX1 484 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 DCDC2Q9UHG0 476 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 TCFL5Q9UL49 500 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 CDC14AQ9UNH5 594 aa10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 PTRH2Q9Y3E5 179 aaKnown RBP10.07□□□□□ -0.8
HNRNPC-232ENST00000557442 ANKDD1BA6NHY2 528 aa10.06□□□□□ -0.8
HNRNPC-232ENST00000557442 A8MT66 165 aa10.06□□□□□ -0.8
HNRNPC-232ENST00000557442 E2F3O00716 465 aa10.06□□□□□ -0.8
HNRNPC-232ENST00000557442 COPEO14579 308 aa10.06□□□□□ -0.8
HNRNPC-232ENST00000557442 FFAR3O14843 346 aa10.06□□□□□ -0.8
HNRNPC-232ENST00000557442 GPR42O15529 346 aa10.06□□□□□ -0.8
HNRNPC-232ENST00000557442 CD63P08962 238 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms