RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 C19orf43Q9BQ61 176 aa17.07■□□□□ 0.32
XRCC3-218ENST00000557439 POLE4Q9NR33 117 aa17.07■□□□□ 0.32
XRCC3-218ENST00000557439 SCN3BQ9NY72 215 aa17.07■□□□□ 0.32
XRCC3-218ENST00000557439 DAPK2Q9UIK4 370 aa17.07■□□□□ 0.32
XRCC3-218ENST00000557439 RUVBL1Q9Y265 456 aaKnown RBP17.07■□□□□ 0.32
XRCC3-218ENST00000557439 NINQ8N4C6 2090 aa17.07■□□□□ 0.32
XRCC3-218ENST00000557439 RGS10O43665 173 aa17.07■□□□□ 0.32
XRCC3-218ENST00000557439 JRKO75564 520 aa17.07■□□□□ 0.32
XRCC3-218ENST00000557439 RFPL2O75678 378 aa17.07■□□□□ 0.32
XRCC3-218ENST00000557439 GSTM1P09488 218 aa17.07■□□□□ 0.32
XRCC3-218ENST00000557439 TYRP14679 529 aa17.07■□□□□ 0.32
XRCC3-218ENST00000557439 HPCAL1P37235 193 aa17.07■□□□□ 0.32
XRCC3-218ENST00000557439 SP140Q13342 867 aa17.07■□□□□ 0.32
XRCC3-218ENST00000557439 KEAP1Q14145 624 aa17.07■□□□□ 0.32
XRCC3-218ENST00000557439 GRIN2CQ14957 1233 aa17.07■□□□□ 0.32
XRCC3-218ENST00000557439 RGNQ15493 299 aa17.07■□□□□ 0.32
XRCC3-218ENST00000557439 LIPJQ5W064 366 aa17.07■□□□□ 0.32
XRCC3-218ENST00000557439 FAM9CQ8IZT9 166 aa17.07■□□□□ 0.32
XRCC3-218ENST00000557439 C2orf73Q8N5S3 287 aaPredicted RBP17.07■□□□□ 0.32
XRCC3-218ENST00000557439 SLAIN1Q8ND83 568 aa17.07■□□□□ 0.32
XRCC3-218ENST00000557439 ST13P5Q8NFI4 369 aaPredicted RBP17.07■□□□□ 0.32
XRCC3-218ENST00000557439 ZNF689Q96CS4 500 aaPredicted RBP17.07■□□□□ 0.32
XRCC3-218ENST00000557439 WRAP53Q9BUR4 548 aaKnown RBP17.07■□□□□ 0.32
XRCC3-218ENST00000557439 ASPSCR1Q9BZE9 553 aa17.07■□□□□ 0.32
XRCC3-218ENST00000557439 FAM120CQ9NX05 1096 aaKnown RBP17.07■□□□□ 0.32
XRCC3-218ENST00000557439 SLC6A14Q9UN76 642 aa17.07■□□□□ 0.32
XRCC3-218ENST00000557439 C1orf226A1L170 272 aa17.06■□□□□ 0.32
XRCC3-218ENST00000557439 SLCO2B1O94956 709 aa17.06■□□□□ 0.32
XRCC3-218ENST00000557439 BMP4P12644 408 aa17.06■□□□□ 0.32
XRCC3-218ENST00000557439 JUNDP17535 347 aa17.06■□□□□ 0.32
XRCC3-218ENST00000557439 IDSP22304 550 aa17.06■□□□□ 0.32
XRCC3-218ENST00000557439 ITGA1P56199 1179 aa17.06■□□□□ 0.32
XRCC3-218ENST00000557439 CSTF3Q12996 717 aaKnown RBP17.06■□□□□ 0.32
XRCC3-218ENST00000557439 MMP21Q8N119 569 aa17.06■□□□□ 0.32
XRCC3-218ENST00000557439 OR4A15Q8NGL6 344 aa17.06■□□□□ 0.32
XRCC3-218ENST00000557439 CLP1Q92989 425 aaKnown RBP17.06■□□□□ 0.32
XRCC3-218ENST00000557439 TMEM159Q96B96 161 aa17.06■□□□□ 0.32
XRCC3-218ENST00000557439 C11orf24Q96F05 449 aaPredicted RBP17.06■□□□□ 0.32
XRCC3-218ENST00000557439 ZNF300Q96RE9 604 aaPredicted RBP17.06■□□□□ 0.32
XRCC3-218ENST00000557439 APOL4Q9BPW4 351 aa17.06■□□□□ 0.32
XRCC3-218ENST00000557439 TRIM39Q9HCM9 518 aa17.06■□□□□ 0.32
XRCC3-218ENST00000557439 AKIP1Q9NQ31 210 aa17.06■□□□□ 0.32
XRCC3-218ENST00000557439 CHCHD3Q9NX63 227 aaKnown RBP17.06■□□□□ 0.32
XRCC3-218ENST00000557439 MGAT4DA6NG13 374 aa17.06■□□□□ 0.32
XRCC3-218ENST00000557439 J3KTA2 159 aa17.06■□□□□ 0.32
XRCC3-218ENST00000557439 EIF3FO00303 357 aaPredicted RBP17.06■□□□□ 0.32
XRCC3-218ENST00000557439 TIMP2P16035 220 aa17.06■□□□□ 0.32
XRCC3-218ENST00000557439 DNASE1L3Q13609 305 aa17.06■□□□□ 0.32
XRCC3-218ENST00000557439 MAPK11Q15759 364 aa17.06■□□□□ 0.32
XRCC3-218ENST00000557439 LY6G5CQ5SRR4 150 aa17.06■□□□□ 0.32
XRCC3-218ENST00000557439 NPAS3Q8IXF0 933 aa17.06■□□□□ 0.32
XRCC3-218ENST00000557439 ALPK1Q96QP1 1244 aa17.06■□□□□ 0.32
XRCC3-218ENST00000557439 FEVQ99581 238 aa17.06■□□□□ 0.32
XRCC3-218ENST00000557439 BTBD2Q9BX70 525 aa17.06■□□□□ 0.32
XRCC3-218ENST00000557439 CHST8Q9H2A9 424 aa17.06■□□□□ 0.32
XRCC3-218ENST00000557439 SPNS1Q9H2V7 528 aa17.06■□□□□ 0.32
XRCC3-218ENST00000557439 RNF6Q9Y252 685 aa17.06■□□□□ 0.32
XRCC3-218ENST00000557439 PCDHGA6Q9Y5G7 932 aa17.06■□□□□ 0.32
XRCC3-218ENST00000557439 PRAMEF25A6NGN4 478 aa17.05■□□□□ 0.32
XRCC3-218ENST00000557439 SUV39H1O43463 412 aa17.05■□□□□ 0.32
XRCC3-218ENST00000557439 PSIP1O75475 530 aaKnown RBP17.05■□□□□ 0.32
XRCC3-218ENST00000557439 TGFB1P01137 390 aa17.05■□□□□ 0.32
XRCC3-218ENST00000557439 ACRP10323 421 aa17.05■□□□□ 0.32
XRCC3-218ENST00000557439 POU2F1P14859 743 aa17.05■□□□□ 0.32
XRCC3-218ENST00000557439 RECQLP46063 649 aaPredicted RBP17.05■□□□□ 0.32
XRCC3-218ENST00000557439 HBA1P69905 142 aa17.05■□□□□ 0.32
XRCC3-218ENST00000557439 ACOX1Q15067 660 aa17.05■□□□□ 0.32
XRCC3-218ENST00000557439 TEAD2Q15562 447 aa17.05■□□□□ 0.32
XRCC3-218ENST00000557439 TRIM16LQ309B1 348 aa17.05■□□□□ 0.32
XRCC3-218ENST00000557439 TMEM220Q6QAJ8 160 aa17.05■□□□□ 0.32
XRCC3-218ENST00000557439 METTL3Q86U44 580 aaKnown RBP17.05■□□□□ 0.32
XRCC3-218ENST00000557439 ELMOD1Q8N336 334 aa17.05■□□□□ 0.32
XRCC3-218ENST00000557439 NEURL2Q9BR09 285 aa17.05■□□□□ 0.32
XRCC3-218ENST00000557439 OR51B5Q9H339 312 aa17.05■□□□□ 0.32
XRCC3-218ENST00000557439 GULP1Q9UBP9 304 aa17.05■□□□□ 0.32
XRCC3-218ENST00000557439 SH3GLB1Q9Y371 365 aa17.05■□□□□ 0.32
XRCC3-218ENST00000557439 PCDHGB1Q9Y5G3 927 aa17.05■□□□□ 0.32
XRCC3-218ENST00000557439 WNT6Q9Y6F9 365 aa17.05■□□□□ 0.32
XRCC3-218ENST00000557439 GOLGA4Q13439 2230 aaKnown RBP17.05■□□□□ 0.32
XRCC3-218ENST00000557439 DNAH14Q0VDD8 3507 aa17.05■□□□□ 0.32
XRCC3-218ENST00000557439 NPC1O15118 1278 aa17.05■□□□□ 0.32
XRCC3-218ENST00000557439 SLC16A5O15375 505 aa17.05■□□□□ 0.32
XRCC3-218ENST00000557439 ZSCAN9O15535 394 aaPredicted RBP17.05■□□□□ 0.32
XRCC3-218ENST00000557439 LILRB3O75022 631 aa17.05■□□□□ 0.32
XRCC3-218ENST00000557439 C9P02748 559 aa17.05■□□□□ 0.32
XRCC3-218ENST00000557439 HLA-EP13747 358 aa17.05■□□□□ 0.32
XRCC3-218ENST00000557439 VIPR1P32241 457 aa17.05■□□□□ 0.32
XRCC3-218ENST00000557439 PRSS53Q2L4Q9 553 aa17.05■□□□□ 0.32
XRCC3-218ENST00000557439 SOWAHCQ53LP3 525 aaPredicted RBP17.05■□□□□ 0.32
XRCC3-218ENST00000557439 HENMT1Q5T8I9 393 aaKnown RBP17.05■□□□□ 0.32
XRCC3-218ENST00000557439 ADCK1Q86TW2 530 aa17.05■□□□□ 0.32
XRCC3-218ENST00000557439 WDR48Q8TAF3 677 aa17.05■□□□□ 0.32
XRCC3-218ENST00000557439 ZNF296Q8WUU4 475 aaPredicted RBP17.05■□□□□ 0.32
XRCC3-218ENST00000557439 ATP11BQ9Y2G3 1177 aa17.05■□□□□ 0.32
XRCC3-218ENST00000557439 NPIPB8E9PQR5 432 aa17.04■□□□□ 0.32
XRCC3-218ENST00000557439 PLK4O00444 970 aa17.04■□□□□ 0.32
XRCC3-218ENST00000557439 ATP6V1G1O75348 118 aa17.04■□□□□ 0.32
XRCC3-218ENST00000557439 C6orf47O95873 294 aa17.04■□□□□ 0.32
XRCC3-218ENST00000557439 CD36P16671 472 aa17.04■□□□□ 0.32
XRCC3-218ENST00000557439 ITGB8P26012 769 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms