RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 CPZQ66K79 652 aa21.72■■□□□ 1.07
TDP1-216ENST00000556867 KLC3Q6P597 504 aa21.72■■□□□ 1.07
TDP1-216ENST00000556867 TMEM151BQ8IW70 566 aa21.72■■□□□ 1.07
TDP1-216ENST00000556867 UBTD2Q8WUN7 234 aa21.72■■□□□ 1.07
TDP1-216ENST00000556867 NACC2Q96BF6 587 aa21.72■■□□□ 1.07
TDP1-216ENST00000556867 MMABQ96EY8 250 aaPredicted RBP21.72■■□□□ 1.07
TDP1-216ENST00000556867 GPR78Q96P69 363 aa21.72■■□□□ 1.07
TDP1-216ENST00000556867 MACROD1Q9BQ69 325 aa21.72■■□□□ 1.07
TDP1-216ENST00000556867 VPS11Q9H270 941 aa21.72■■□□□ 1.07
TDP1-216ENST00000556867 EPB41L4BQ9H329 900 aa21.72■■□□□ 1.07
TDP1-216ENST00000556867 ZFP69BQ9UJL9 534 aa21.72■■□□□ 1.07
TDP1-216ENST00000556867 ARGFXA6NJG6 315 aa21.71■■□□□ 1.07
TDP1-216ENST00000556867 SYCE1LA8MT33 242 aa21.71■■□□□ 1.07
TDP1-216ENST00000556867 TRIM49D1C9J1S8 452 aa21.71■■□□□ 1.07
TDP1-216ENST00000556867 UBXN8O00124 270 aa21.71■■□□□ 1.07
TDP1-216ENST00000556867 NSA2O95478 260 aaKnown RBP21.71■■□□□ 1.07
TDP1-216ENST00000556867 C1GALT1C1LP0DN25 315 aa21.71■■□□□ 1.07
TDP1-216ENST00000556867 MTHFD2P13995 350 aa21.71■■□□□ 1.07
TDP1-216ENST00000556867 VARSP26640 1264 aaKnown RBP21.71■■□□□ 1.07
TDP1-216ENST00000556867 GCAP28676 217 aa21.71■■□□□ 1.07
TDP1-216ENST00000556867 AVPR1BP47901 424 aa21.71■■□□□ 1.07
TDP1-216ENST00000556867 OCA2Q04671 838 aa21.71■■□□□ 1.07
TDP1-216ENST00000556867 PWP1Q13610 501 aa21.71■■□□□ 1.07
TDP1-216ENST00000556867 FBXO48Q5FWF7 155 aa21.71■■□□□ 1.07
TDP1-216ENST00000556867 ATG9BQ674R7 924 aa21.71■■□□□ 1.07
TDP1-216ENST00000556867 LRRC70Q7Z2Q7 622 aa21.71■■□□□ 1.07
TDP1-216ENST00000556867 PPP1R32Q7Z5V6 425 aa21.71■■□□□ 1.07
TDP1-216ENST00000556867 ZNF843Q8N446 348 aa21.71■■□□□ 1.07
TDP1-216ENST00000556867 KCT2Q8NC54 265 aa21.71■■□□□ 1.07
TDP1-216ENST00000556867 STT3BQ8TCJ2 826 aa21.71■■□□□ 1.07
TDP1-216ENST00000556867 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.71■■□□□ 1.07
TDP1-216ENST00000556867 ESAMQ96AP7 390 aa21.71■■□□□ 1.07
TDP1-216ENST00000556867 TRIM55Q9BYV6 548 aa21.71■■□□□ 1.07
TDP1-216ENST00000556867 CD244Q9BZW8 370 aa21.71■■□□□ 1.07
TDP1-216ENST00000556867 EHD1Q9H4M9 534 aa21.71■■□□□ 1.07
TDP1-216ENST00000556867 SOX17Q9H6I2 414 aaPredicted RBP21.71■■□□□ 1.07
TDP1-216ENST00000556867 MAP4K5Q9Y4K4 846 aa21.71■■□□□ 1.07
TDP1-216ENST00000556867 SLC22A7Q9Y694 548 aa21.71■■□□□ 1.07
TDP1-216ENST00000556867 BSNQ9UPA5 3926 aa21.71■■□□□ 1.07
TDP1-216ENST00000556867 ESPNB1AK53 854 aa21.7■■□□□ 1.06
TDP1-216ENST00000556867 H0YIG0 161 aa21.7■■□□□ 1.06
TDP1-216ENST00000556867 NDUFS4O43181 175 aa21.7■■□□□ 1.06
TDP1-216ENST00000556867 SNRPAP09012 282 aaKnown RBP21.7■■□□□ 1.06
TDP1-216ENST00000556867 ZGLP1P0C6A0 271 aa21.7■■□□□ 1.06
TDP1-216ENST00000556867 MMP11P24347 488 aa21.7■■□□□ 1.06
TDP1-216ENST00000556867 CXCR2P25025 360 aa21.7■■□□□ 1.06
TDP1-216ENST00000556867 GLRBP48167 497 aa21.7■■□□□ 1.06
TDP1-216ENST00000556867 SLC29A2Q14542 456 aa21.7■■□□□ 1.06
TDP1-216ENST00000556867 PDK4Q16654 411 aa21.7■■□□□ 1.06
TDP1-216ENST00000556867 ADGRD1Q6QNK2 874 aa21.7■■□□□ 1.06
TDP1-216ENST00000556867 MED25Q71SY5 747 aa21.7■■□□□ 1.06
TDP1-216ENST00000556867 TMEM102Q8N9M5 508 aaPredicted RBP21.7■■□□□ 1.06
TDP1-216ENST00000556867 ANKRD53Q8N9V6 530 aa21.7■■□□□ 1.06
TDP1-216ENST00000556867 C9orf43Q8TAL5 461 aaPredicted RBP21.7■■□□□ 1.06
TDP1-216ENST00000556867 NT5CQ8TCD5 201 aa21.7■■□□□ 1.06
TDP1-216ENST00000556867 MIEF2Q96C03 454 aa21.7■■□□□ 1.06
TDP1-216ENST00000556867 ING2Q9H160 280 aa21.7■■□□□ 1.06
TDP1-216ENST00000556867 SLC25A18Q9H1K4 315 aa21.7■■□□□ 1.06
TDP1-216ENST00000556867 ANKZF1Q9H8Y5 726 aa21.7■■□□□ 1.06
TDP1-216ENST00000556867 MKKSQ9NPJ1 570 aaPredicted RBP21.7■■□□□ 1.06
TDP1-216ENST00000556867 C14orf105Q9NVL8 296 aa21.7■■□□□ 1.06
TDP1-216ENST00000556867 COPG2Q9UBF2 871 aa21.7■■□□□ 1.06
TDP1-216ENST00000556867 TRPC4Q9UBN4 977 aa21.7■■□□□ 1.06
TDP1-216ENST00000556867 FETUBQ9UGM5 382 aa21.7■■□□□ 1.06
TDP1-216ENST00000556867 ASB1Q9Y576 335 aa21.7■■□□□ 1.06
TDP1-216ENST00000556867 SCN3AQ9NY46 2000 aa21.7■■□□□ 1.06
TDP1-216ENST00000556867 MKRN2OSH3BPM6 223 aa21.69■■□□□ 1.06
TDP1-216ENST00000556867 DNAJB5O75953 348 aa21.69■■□□□ 1.06
TDP1-216ENST00000556867 IL1RNP18510 177 aa21.69■■□□□ 1.06
TDP1-216ENST00000556867 RRADP55042 308 aa21.69■■□□□ 1.06
TDP1-216ENST00000556867 KLC1Q07866 573 aa21.69■■□□□ 1.06
TDP1-216ENST00000556867 CHAF1BQ13112 559 aa21.69■■□□□ 1.06
TDP1-216ENST00000556867 TECRLQ5HYJ1 363 aa21.69■■□□□ 1.06
TDP1-216ENST00000556867 LGSNQ5TDP6 509 aa21.69■■□□□ 1.06
TDP1-216ENST00000556867 SHISA6Q6ZSJ9 500 aa21.69■■□□□ 1.06
TDP1-216ENST00000556867 PRSS41Q7RTY9 318 aa21.69■■□□□ 1.06
TDP1-216ENST00000556867 PLD6Q8N2A8 252 aaKnown RBP21.69■■□□□ 1.06
TDP1-216ENST00000556867 SNX31Q8N9S9 440 aa21.69■■□□□ 1.06
TDP1-216ENST00000556867 TRPV3Q8NET8 790 aa21.69■■□□□ 1.06
TDP1-216ENST00000556867 OR9A4Q8NGU2 314 aa21.69■■□□□ 1.06
TDP1-216ENST00000556867 ZCCHC10Q8TBK6 192 aa21.69■■□□□ 1.06
TDP1-216ENST00000556867 MOCOSQ96EN8 888 aa21.69■■□□□ 1.06
TDP1-216ENST00000556867 WDR34Q96EX3 536 aa21.69■■□□□ 1.06
TDP1-216ENST00000556867 ABHD17AQ96GS6 310 aa21.69■■□□□ 1.06
TDP1-216ENST00000556867 TGIF2Q9GZN2 237 aa21.69■■□□□ 1.06
TDP1-216ENST00000556867 PITHD1Q9GZP4 211 aaPredicted RBP21.69■■□□□ 1.06
TDP1-216ENST00000556867 ACSS2Q9NR19 701 aa21.69■■□□□ 1.06
TDP1-216ENST00000556867 SEMA3GQ9NS98 782 aa21.69■■□□□ 1.06
TDP1-216ENST00000556867 PEX12O00623 359 aa21.68■■□□□ 1.06
TDP1-216ENST00000556867 MAP2K7O14733 419 aa21.68■■□□□ 1.06
TDP1-216ENST00000556867 CLGNO14967 610 aa21.68■■□□□ 1.06
TDP1-216ENST00000556867 KLK8O60259 260 aa21.68■■□□□ 1.06
TDP1-216ENST00000556867 CCNT2O60583 730 aaKnown RBP21.68■■□□□ 1.06
TDP1-216ENST00000556867 H2AFYO75367 372 aaKnown RBP21.68■■□□□ 1.06
TDP1-216ENST00000556867 IGHEP01854 428 aa21.68■■□□□ 1.06
TDP1-216ENST00000556867 COL6A2P12110 1019 aa21.68■■□□□ 1.06
TDP1-216ENST00000556867 EPORP19235 508 aa21.68■■□□□ 1.06
TDP1-216ENST00000556867 AGTR2P50052 363 aa21.68■■□□□ 1.06
TDP1-216ENST00000556867 RGS1Q08116 209 aa21.68■■□□□ 1.06
TDP1-216ENST00000556867 SLBPQ14493 270 aaKnown RBP eCLIP21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms