RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 CLDN17P56750 224 aa3.79□□□□□ -1.8
SCFD1-221ENST00000556534 PTENP60484 403 aa3.79□□□□□ -1.8
SCFD1-221ENST00000556534 MTHFSDQ2M296 383 aaKnown RBP3.79□□□□□ -1.8
SCFD1-221ENST00000556534 FAM91A1Q658Y4 838 aa3.79□□□□□ -1.8
SCFD1-221ENST00000556534 TXNRD3NBQ6F5E7 133 aa3.79□□□□□ -1.8
SCFD1-221ENST00000556534 TTC27Q6P3X3 843 aa3.79□□□□□ -1.8
SCFD1-221ENST00000556534 PAQR6Q6TCH4 344 aa3.79□□□□□ -1.8
SCFD1-221ENST00000556534 PRSS55Q6UWB4 352 aaPredicted RBP3.79□□□□□ -1.8
SCFD1-221ENST00000556534 TMEM182Q6ZP80 229 aaPredicted RBP3.79□□□□□ -1.8
SCFD1-221ENST00000556534 PIGWQ7Z7B1 504 aa3.79□□□□□ -1.8
SCFD1-221ENST00000556534 THNSL1Q8IYQ7 743 aa3.79□□□□□ -1.8
SCFD1-221ENST00000556534 NKAIN3Q8N8D7 197 aa3.79□□□□□ -1.8
SCFD1-221ENST00000556534 CCDC63Q8NA47 563 aa3.79□□□□□ -1.8
SCFD1-221ENST00000556534 HEXDCQ8WVB3 486 aa3.79□□□□□ -1.8
SCFD1-221ENST00000556534 ST6GALNAC6Q969X2 333 aa3.79□□□□□ -1.8
SCFD1-221ENST00000556534 ANKRD9Q96BM1 317 aaPredicted RBP3.79□□□□□ -1.8
SCFD1-221ENST00000556534 NEDD4LQ96PU5 975 aa3.79□□□□□ -1.8
SCFD1-221ENST00000556534 EDEM3Q9BZQ6 932 aa3.79□□□□□ -1.8
SCFD1-221ENST00000556534 MTHFD2LQ9H903 347 aaPredicted RBP3.79□□□□□ -1.8
SCFD1-221ENST00000556534 RNF121Q9H920 327 aa3.79□□□□□ -1.8
SCFD1-221ENST00000556534 ZCCHC17Q9NP64 241 aaKnown RBP3.79□□□□□ -1.8
SCFD1-221ENST00000556534 IARS2Q9NSE4 1012 aaKnown RBP3.79□□□□□ -1.8
SCFD1-221ENST00000556534 HACD3Q9P035 362 aa3.79□□□□□ -1.8
SCFD1-221ENST00000556534 FBXL4Q9UKA2 621 aa3.79□□□□□ -1.8
SCFD1-221ENST00000556534 KLK13Q9UKR3 277 aa3.79□□□□□ -1.8
SCFD1-221ENST00000556534 LOC105371242A0A075B767 164 aa3.78□□□□□ -1.8
SCFD1-221ENST00000556534 A0A087WZ39 114 aa3.78□□□□□ -1.8
SCFD1-221ENST00000556534 H3BMM5 538 aa3.78□□□□□ -1.8
SCFD1-221ENST00000556534 K7EQD1 137 aa3.78□□□□□ -1.8
SCFD1-221ENST00000556534 SLC1A7O00341 560 aa3.78□□□□□ -1.8
SCFD1-221ENST00000556534 PPIP5K2O43314 1243 aa3.78□□□□□ -1.8
SCFD1-221ENST00000556534 TLX2O43763 284 aaPredicted RBP3.78□□□□□ -1.8
SCFD1-221ENST00000556534 ECE2O60344 883 aa3.78□□□□□ -1.8
SCFD1-221ENST00000556534 FCGR3BO75015 233 aa3.78□□□□□ -1.8
SCFD1-221ENST00000556534 SAP30O75446 220 aa3.78□□□□□ -1.8
SCFD1-221ENST00000556534 YES1P07947 543 aa3.78□□□□□ -1.8
SCFD1-221ENST00000556534 FAM58BPP0C7Q3 252 aa3.78□□□□□ -1.8
SCFD1-221ENST00000556534 PDGFRAP16234 1089 aa3.78□□□□□ -1.8
SCFD1-221ENST00000556534 LBPP18428 481 aa3.78□□□□□ -1.8
SCFD1-221ENST00000556534 SULT2A1Q06520 285 aa3.78□□□□□ -1.8
SCFD1-221ENST00000556534 IL10RBQ08334 325 aa3.78□□□□□ -1.8
SCFD1-221ENST00000556534 TFCP2Q12800 502 aa3.78□□□□□ -1.8
SCFD1-221ENST00000556534 GDPGP1Q6ZNW5 385 aa3.78□□□□□ -1.8
SCFD1-221ENST00000556534 Q8N377 158 aa3.78□□□□□ -1.8
SCFD1-221ENST00000556534 MIPOL1Q8TD10 442 aa3.78□□□□□ -1.8
SCFD1-221ENST00000556534 FAM222BQ8WU58 562 aa3.78□□□□□ -1.8
SCFD1-221ENST00000556534 ATXN7L3BQ96GX2 97 aa3.78□□□□□ -1.8
SCFD1-221ENST00000556534 ZMAT2Q96NC0 199 aaKnown RBP3.78□□□□□ -1.8
SCFD1-221ENST00000556534 AGAP4Q96P64 663 aa3.78□□□□□ -1.8
SCFD1-221ENST00000556534 INTS14Q96SY0 518 aa3.78□□□□□ -1.8
SCFD1-221ENST00000556534 INPP5KQ9BT40 448 aa3.78□□□□□ -1.8
SCFD1-221ENST00000556534 PFDN4Q9NQP4 134 aa3.78□□□□□ -1.8
SCFD1-221ENST00000556534 LNPEPQ9UIQ6 1025 aa3.78□□□□□ -1.8
SCFD1-221ENST00000556534 HTR3EA5X5Y0 456 aa3.77□□□□□ -1.81
SCFD1-221ENST00000556534 GLTPD2A6NH11 291 aa3.77□□□□□ -1.81
SCFD1-221ENST00000556534 PRSS46E5RG02 174 aa3.77□□□□□ -1.81
SCFD1-221ENST00000556534 FLRT2O43155 660 aa3.77□□□□□ -1.81
SCFD1-221ENST00000556534 PGLSO95336 258 aa3.77□□□□□ -1.81
SCFD1-221ENST00000556534 SIX3O95343 332 aaPredicted RBP3.77□□□□□ -1.81
SCFD1-221ENST00000556534 EDNRAP25101 427 aa3.77□□□□□ -1.81
SCFD1-221ENST00000556534 PSMB4P28070 264 aa3.77□□□□□ -1.81
SCFD1-221ENST00000556534 PDHA2P29803 388 aa3.77□□□□□ -1.81
SCFD1-221ENST00000556534 GP5P40197 560 aa3.77□□□□□ -1.81
SCFD1-221ENST00000556534 PRKCIP41743 596 aa3.77□□□□□ -1.81
SCFD1-221ENST00000556534 CAPZA1P52907 286 aa3.77□□□□□ -1.81
SCFD1-221ENST00000556534 ROR1Q01973 937 aa3.77□□□□□ -1.81
SCFD1-221ENST00000556534 ELAVL2Q12926 359 aaKnown RBP3.77□□□□□ -1.81
SCFD1-221ENST00000556534 ATP1A1-AS1Q5TC04 95 aa3.77□□□□□ -1.81
SCFD1-221ENST00000556534 SHEQ5VZ18 495 aa3.77□□□□□ -1.81
SCFD1-221ENST00000556534 GPRIN3Q6ZVF9 776 aa3.77□□□□□ -1.81
SCFD1-221ENST00000556534 CHMP1BQ7LBR1 199 aa3.77□□□□□ -1.81
SCFD1-221ENST00000556534 GPR141Q7Z602 305 aa3.77□□□□□ -1.81
SCFD1-221ENST00000556534 TIGD4Q8IY51 512 aa3.77□□□□□ -1.81
SCFD1-221ENST00000556534 TCEANCQ8N8B7 351 aa3.77□□□□□ -1.81
SCFD1-221ENST00000556534 OR4D10Q8NGI6 311 aa3.77□□□□□ -1.81
SCFD1-221ENST00000556534 SLC26A7Q8TE54 656 aa3.77□□□□□ -1.81
SCFD1-221ENST00000556534 CHURC1Q8WUH1 139 aa3.77□□□□□ -1.81
SCFD1-221ENST00000556534 PYGO2Q9BRQ0 406 aa3.77□□□□□ -1.81
SCFD1-221ENST00000556534 GPATCH1Q9BRR8 931 aaKnown RBP3.77□□□□□ -1.81
SCFD1-221ENST00000556534 UBXN6Q9BZV1 441 aa3.77□□□□□ -1.81
SCFD1-221ENST00000556534 B3GAT2Q9NPZ5 323 aa3.77□□□□□ -1.81
SCFD1-221ENST00000556534 SH3GLB2Q9NR46 395 aa3.77□□□□□ -1.81
SCFD1-221ENST00000556534 KLK4Q9Y5K2 254 aa3.77□□□□□ -1.81
SCFD1-221ENST00000556534 NPHP3Q7Z494 1330 aa3.76□□□□□ -1.81
SCFD1-221ENST00000556534 A0A1W2PPR1 153 aa3.76□□□□□ -1.81
SCFD1-221ENST00000556534 C5orf52A6NGY3 159 aa3.76□□□□□ -1.81
SCFD1-221ENST00000556534 SHISA7A6NL88 538 aa3.76□□□□□ -1.81
SCFD1-221ENST00000556534 ERI2A8K979 691 aaKnown RBP3.76□□□□□ -1.81
SCFD1-221ENST00000556534 TMEM150CB9EJG8 249 aa3.76□□□□□ -1.81
SCFD1-221ENST00000556534 RTCAO00442 366 aaKnown RBP3.76□□□□□ -1.81
SCFD1-221ENST00000556534 NXPH4O95158 308 aa3.76□□□□□ -1.81
SCFD1-221ENST00000556534 C9P02748 559 aa3.76□□□□□ -1.81
SCFD1-221ENST00000556534 GATA1P15976 413 aaPredicted RBP3.76□□□□□ -1.81
SCFD1-221ENST00000556534 SELEP16581 610 aa3.76□□□□□ -1.81
SCFD1-221ENST00000556534 FAM189A2Q15884 450 aa3.76□□□□□ -1.81
SCFD1-221ENST00000556534 DUSP5Q16690 384 aa3.76□□□□□ -1.81
SCFD1-221ENST00000556534 CDO1Q16878 200 aa3.76□□□□□ -1.81
SCFD1-221ENST00000556534 FAM106AQ4KMX7 169 aa3.76□□□□□ -1.81
SCFD1-221ENST00000556534 FGD3Q5JSP0 725 aa3.76□□□□□ -1.81
SCFD1-221ENST00000556534 ZNF343Q6P1L6 599 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms