RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 EFCAB1Q9HAE3 211 aa9.48□□□□□ -0.89
PSEN1-213ENST00000555386 POMT2Q9UKY4 750 aa9.48□□□□□ -0.89
PSEN1-213ENST00000555386 WASF3Q9UPY6 502 aa9.48□□□□□ -0.89
PSEN1-213ENST00000555386 MN1Q10571 1320 aaPredicted RBP9.48□□□□□ -0.89
PSEN1-213ENST00000555386 SEC16AO15027 2179 aa9.48□□□□□ -0.89
PSEN1-213ENST00000555386 APC2O95996 2303 aa9.48□□□□□ -0.89
PSEN1-213ENST00000555386 ADAMTS20P59510 1910 aa9.48□□□□□ -0.89
PSEN1-213ENST00000555386 FAM221BA6H8Z2 402 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 TLCD2A6NGC4 264 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 TMX2-CTNND1H3BSU7 103 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 PLD2O14939 933 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 SMIM24O75264 130 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 SMNDC1O75940 238 aaKnown RBP eCLIP9.47□□□□□ -0.89
PSEN1-213ENST00000555386 C9P02748 559 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 EBLN1P0CF75 366 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 CD1DP15813 335 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 ST6GAL1P15907 406 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 IMPA1P29218 277 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 GRIA3P42263 894 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 ATP4BP51164 291 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 YBX1P67809 324 aaKnown RBP9.47□□□□□ -0.89
PSEN1-213ENST00000555386 CYP4F3Q08477 520 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 NAE1Q13564 534 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 CCNIQ14094 377 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 SQLEQ14534 574 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 CLPPQ16740 277 aaPredicted RBP9.47□□□□□ -0.89
PSEN1-213ENST00000555386 C18orf21Q32NC0 220 aaPredicted RBP9.47□□□□□ -0.89
PSEN1-213ENST00000555386 NXNQ6DKJ4 435 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 ZFP1Q6P2D0 407 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 SBSNQ6UWP8 590 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 BNC2Q6ZN30 1099 aaPredicted RBP9.47□□□□□ -0.89
PSEN1-213ENST00000555386 ARHGAP22Q7Z5H3 698 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 GPSM1Q86YR5 675 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 DSELQ8IZU8 1212 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 WDR36Q8NI36 951 aaKnown RBP9.47□□□□□ -0.89
PSEN1-213ENST00000555386 AGR3Q8TD06 166 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 ZNF480Q8WV37 535 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 PTERQ96BW5 349 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 MIEF2Q96C03 454 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 PYCR2Q96C36 320 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 CCDC138Q96M89 665 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 MENTQ9BUN1 341 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 RAB11FIP5Q9BXF6 653 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 SLC12A9Q9BXP2 914 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 DERL2Q9GZP9 239 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 VCXQ9H320 206 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 SLC39A1Q9NY26 324 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 CD274Q9NZQ7 290 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 SPATA7Q9P0W8 599 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 STOX2Q9P2F5 926 aaPredicted RBP9.47□□□□□ -0.89
PSEN1-213ENST00000555386 EPHA6Q9UF33 1036 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 RNF112Q9ULX5 631 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 MSRB2Q9Y3D2 182 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 NEUROG3Q9Y4Z2 214 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 DMXL2Q8TDJ6 3036 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 URB1O60287 2271 aaKnown RBP9.47□□□□□ -0.89
PSEN1-213ENST00000555386 A0A0J9YY10 115 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 A6NHS1 94 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 SUPT3HB4E1H0 165 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 UBXN8O00124 270 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 CASQ2O14958 399 aaPredicted RBP9.47□□□□□ -0.89
PSEN1-213ENST00000555386 SLC16A5O15375 505 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 PEX1O43933 1283 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 BRINP1O60477 761 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 SUPT3HO75486 399 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 RBMS1P29558 406 aaKnown RBP9.47□□□□□ -0.89
PSEN1-213ENST00000555386 CCR10P46092 362 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 NUDT2P50583 147 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 HERVK_113P63132 956 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 STX5Q13190 355 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 SP140Q13342 867 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 TRA2AQ13595 282 aaKnown RBP eCLIP9.47□□□□□ -0.89
PSEN1-213ENST00000555386 KIR2DS3Q14952 304 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 GPR19Q15760 415 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 PDCD2Q16342 344 aaPredicted RBP9.47□□□□□ -0.89
PSEN1-213ENST00000555386 CYP2A13Q16696 494 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 DEFB110Q30KQ9 67 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 KIAA1614Q5VZ46 1190 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 AGTRAPQ6RW13 159 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 ADCK2Q7Z695 626 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 ADAMTSL2Q86TH1 951 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 ISCA2Q86U28 154 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 CUZD1Q86UP6 607 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 SLC26A7Q8TE54 656 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 SMPDL3AQ92484 453 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 USP7Q93009 1102 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 PMEPA1Q969W9 287 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 LIN37Q96GY3 246 aaPredicted RBP9.47□□□□□ -0.89
PSEN1-213ENST00000555386 PDLIM5Q96HC4 596 aaKnown RBP9.47□□□□□ -0.89
PSEN1-213ENST00000555386 CATSPER2Q96P56 530 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 OR6C1Q96RD1 312 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 ECSITQ9BQ95 431 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 ERVK-6Q9BXR3 956 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 GSTO2Q9H4Y5 243 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 ZNF768Q9H5H4 540 aaKnown RBP9.47□□□□□ -0.89
PSEN1-213ENST00000555386 POLR1BQ9H9Y6 1135 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 APMAPQ9HDC9 416 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 IRAK4Q9NWZ3 460 aa9.47□□□□□ -0.89
PSEN1-213ENST00000555386 C6orf203Q9P0P8 240 aaPredicted RBP9.47□□□□□ -0.89
PSEN1-213ENST00000555386 TAC3Q9UHF0 121 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms