RNA–Protein interactions for RNA: ENST00000555353.5

FOXN3-209, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 1,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-209ENST00000555353 NEIL2Q969S2 332 aa19.59■□□□□ 0.73
FOXN3-209ENST00000555353 PHF21BQ96EK2 531 aa19.59■□□□□ 0.73
FOXN3-209ENST00000555353 ENAMQ9NRM1 1142 aa19.59■□□□□ 0.73
FOXN3-209ENST00000555353 CUTCQ9NTM9 273 aa19.59■□□□□ 0.73
FOXN3-209ENST00000555353 LHX6Q9UPM6 363 aa19.59■□□□□ 0.73
FOXN3-209ENST00000555353 HYKKA2RU49 373 aa19.58■□□□□ 0.73
FOXN3-209ENST00000555353 WDR91A4D1P6 747 aa19.58■□□□□ 0.73
FOXN3-209ENST00000555353 FITM1A5D6W6 292 aa19.58■□□□□ 0.73
FOXN3-209ENST00000555353 C9J4A7 227 aa19.58■□□□□ 0.73
FOXN3-209ENST00000555353 TXNDC9O14530 226 aa19.58■□□□□ 0.73
FOXN3-209ENST00000555353 GDF5P43026 501 aa19.58■□□□□ 0.73
FOXN3-209ENST00000555353 SLC6A12P48065 614 aa19.58■□□□□ 0.73
FOXN3-209ENST00000555353 DNAJB13P59910 316 aa19.58■□□□□ 0.73
FOXN3-209ENST00000555353 COL9A2Q14055 689 aaPredicted RBP19.58■□□□□ 0.73
FOXN3-209ENST00000555353 SETDB1Q15047 1291 aa19.58■□□□□ 0.73
FOXN3-209ENST00000555353 TBC1D19Q8N5T2 526 aa19.58■□□□□ 0.73
FOXN3-209ENST00000555353 STARD8Q92502 1023 aa19.58■□□□□ 0.73
FOXN3-209ENST00000555353 GPR87Q9BY21 358 aa19.58■□□□□ 0.73
FOXN3-209ENST00000555353 A0A1B0GX78 115 aa19.57■□□□□ 0.72
FOXN3-209ENST00000555353 ZNF891A8MT65 544 aaPredicted RBP19.57■□□□□ 0.72
FOXN3-209ENST00000555353 POLR3GO15318 223 aaPredicted RBP19.57■□□□□ 0.72
FOXN3-209ENST00000555353 TAPBPO15533 448 aa19.57■□□□□ 0.72
FOXN3-209ENST00000555353 STK16O75716 305 aa19.57■□□□□ 0.72
FOXN3-209ENST00000555353 ATXN8OSP0DMR3 200 aa19.57■□□□□ 0.72
FOXN3-209ENST00000555353 F8A1P23610 371 aa19.57■□□□□ 0.72
FOXN3-209ENST00000555353 GGT5P36269 586 aa19.57■□□□□ 0.72
FOXN3-209ENST00000555353 HSPA7P48741 367 aa19.57■□□□□ 0.72
FOXN3-209ENST00000555353 DCDP81605 110 aaKnown RBP19.57■□□□□ 0.72
FOXN3-209ENST00000555353 METTL2BQ6P1Q9 378 aaKnown RBP19.57■□□□□ 0.72
FOXN3-209ENST00000555353 TMPRSS11BQ86T26 416 aa19.57■□□□□ 0.72
FOXN3-209ENST00000555353 KLHDC8AQ8IYD2 350 aa19.57■□□□□ 0.72
FOXN3-209ENST00000555353 SNRNP27Q8WVK2 155 aaKnown RBP19.57■□□□□ 0.72
FOXN3-209ENST00000555353 THAP11Q96EK4 314 aa19.57■□□□□ 0.72
FOXN3-209ENST00000555353 GBP5Q96PP8 586 aa19.57■□□□□ 0.72
FOXN3-209ENST00000555353 C17orf62Q9BQA9 187 aa19.57■□□□□ 0.72
FOXN3-209ENST00000555353 TMEM79Q9BSE2 394 aa19.57■□□□□ 0.72
FOXN3-209ENST00000555353 MECRQ9BV79 373 aa19.57■□□□□ 0.72
FOXN3-209ENST00000555353 NLNQ9BYT8 704 aa19.57■□□□□ 0.72
FOXN3-209ENST00000555353 PTBP2Q9UKA9 531 aaKnown RBP19.57■□□□□ 0.72
FOXN3-209ENST00000555353 LOC400499M0QZD8 3231 aa19.57■□□□□ 0.72
FOXN3-209ENST00000555353 MGAQ8IWI9 3026 aa19.57■□□□□ 0.72
FOXN3-209ENST00000555353 KCNE1BA0A087WTH5 132 aa19.57■□□□□ 0.72
FOXN3-209ENST00000555353 FEZF1A0PJY2 475 aa19.57■□□□□ 0.72
FOXN3-209ENST00000555353 TERTO14746 1132 aaKnown RBP19.57■□□□□ 0.72
FOXN3-209ENST00000555353 DSCR3O14972 297 aa19.57■□□□□ 0.72
FOXN3-209ENST00000555353 GNAZP19086 355 aa19.57■□□□□ 0.72
FOXN3-209ENST00000555353 IMPDH1P20839 514 aa19.57■□□□□ 0.72
FOXN3-209ENST00000555353 GCGRP47871 477 aa19.57■□□□□ 0.72
FOXN3-209ENST00000555353 HERVK_113P63132 956 aa19.57■□□□□ 0.72
FOXN3-209ENST00000555353 MC1RQ01726 317 aa19.57■□□□□ 0.72
FOXN3-209ENST00000555353 CDC16Q13042 620 aa19.57■□□□□ 0.72
FOXN3-209ENST00000555353 MUM1Q2TAK8 710 aa19.57■□□□□ 0.72
FOXN3-209ENST00000555353 FBXO48Q5FWF7 155 aa19.57■□□□□ 0.72
FOXN3-209ENST00000555353 CFAP157Q5JU67 520 aa19.57■□□□□ 0.72
FOXN3-209ENST00000555353 CATSPEREQ5SY80 951 aa19.57■□□□□ 0.72
FOXN3-209ENST00000555353 ZNF385CQ66K41 422 aaPredicted RBP19.57■□□□□ 0.72
FOXN3-209ENST00000555353 LCN10Q6JVE6 187 aa19.57■□□□□ 0.72
FOXN3-209ENST00000555353 RAB3IL1Q8TBN0 382 aa19.57■□□□□ 0.72
FOXN3-209ENST00000555353 PPP4R1Q8TF05 950 aa19.57■□□□□ 0.72
FOXN3-209ENST00000555353 UBTD2Q8WUN7 234 aa19.57■□□□□ 0.72
FOXN3-209ENST00000555353 ESAMQ96AP7 390 aa19.57■□□□□ 0.72
FOXN3-209ENST00000555353 ERVK-6Q9BXR3 956 aa19.57■□□□□ 0.72
FOXN3-209ENST00000555353 CAPS2Q9BXY5 557 aa19.57■□□□□ 0.72
FOXN3-209ENST00000555353 PELI2Q9HAT8 420 aa19.57■□□□□ 0.72
FOXN3-209ENST00000555353 DNAJC11Q9NVH1 559 aa19.57■□□□□ 0.72
FOXN3-209ENST00000555353 PCDHGA6Q9Y5G7 932 aa19.57■□□□□ 0.72
FOXN3-209ENST00000555353 MRPS18BQ9Y676 258 aaKnown RBP19.57■□□□□ 0.72
FOXN3-209ENST00000555353 ITPR1Q14643 2758 aa19.56■□□□□ 0.72
FOXN3-209ENST00000555353 MDH1P40925 334 aaKnown RBP19.56■□□□□ 0.72
FOXN3-209ENST00000555353 MEF2AQ02078 507 aaPredicted RBP19.56■□□□□ 0.72
FOXN3-209ENST00000555353 HKDC1Q2TB90 917 aa19.56■□□□□ 0.72
FOXN3-209ENST00000555353 PRTGQ2VWP7 1150 aa19.56■□□□□ 0.72
FOXN3-209ENST00000555353 NKAIN1Q4KMZ8 207 aa19.56■□□□□ 0.72
FOXN3-209ENST00000555353 ATG16L1Q676U5 607 aa19.56■□□□□ 0.72
FOXN3-209ENST00000555353 NXPE4Q6UWF7 544 aa19.56■□□□□ 0.72
FOXN3-209ENST00000555353 SNX31Q8N9S9 440 aa19.56■□□□□ 0.72
FOXN3-209ENST00000555353 OR4K1Q8NGD4 311 aa19.56■□□□□ 0.72
FOXN3-209ENST00000555353 L3HYPDHQ96EM0 354 aa19.56■□□□□ 0.72
FOXN3-209ENST00000555353 AIF1LQ9BQI0 150 aa19.56■□□□□ 0.72
FOXN3-209ENST00000555353 FAM117AQ9C073 453 aa19.56■□□□□ 0.72
FOXN3-209ENST00000555353 ACTL8Q9H568 366 aa19.56■□□□□ 0.72
FOXN3-209ENST00000555353 SYNPO2LQ9H987 977 aa19.56■□□□□ 0.72
FOXN3-209ENST00000555353 IFT80Q9P2H3 777 aaPredicted RBP19.56■□□□□ 0.72
FOXN3-209ENST00000555353 GPN3Q9UHW5 284 aaPredicted RBP19.56■□□□□ 0.72
FOXN3-209ENST00000555353 RUVBL1Q9Y265 456 aaKnown RBP19.56■□□□□ 0.72
FOXN3-209ENST00000555353 FARSAQ9Y285 508 aaKnown RBP19.56■□□□□ 0.72
FOXN3-209ENST00000555353 CCDC88CQ9P219 2028 aa19.55■□□□□ 0.72
FOXN3-209ENST00000555353 TRBC2A0A5B9 178 aa19.55■□□□□ 0.72
FOXN3-209ENST00000555353 OR1F1O43749 312 aa19.55■□□□□ 0.72
FOXN3-209ENST00000555353 CCNT2O60583 730 aaKnown RBP19.55■□□□□ 0.72
FOXN3-209ENST00000555353 SERPINE1P05121 402 aa19.55■□□□□ 0.72
FOXN3-209ENST00000555353 RAB40ALP0C0E4 278 aa19.55■□□□□ 0.72
FOXN3-209ENST00000555353 PIM1P11309 404 aaPredicted RBP19.55■□□□□ 0.72
FOXN3-209ENST00000555353 GRK2P25098 689 aa19.55■□□□□ 0.72
FOXN3-209ENST00000555353 PTPN4P29074 926 aa19.55■□□□□ 0.72
FOXN3-209ENST00000555353 EEF1DP29692 281 aaKnown RBP19.55■□□□□ 0.72
FOXN3-209ENST00000555353 BCL6P41182 706 aa19.55■□□□□ 0.72
FOXN3-209ENST00000555353 EMP3P54852 163 aa19.55■□□□□ 0.72
FOXN3-209ENST00000555353 NCF4Q15080 339 aa19.55■□□□□ 0.72
FOXN3-209ENST00000555353 PCBP2Q15366 365 aaKnown RBP eCLIP19.55■□□□□ 0.727e-7■■■■■ 43.2
Retrieved 100 of 20,778 RNA–protein pairs in 198.2 ms