RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 PAQR7Q86WK9 346 aa10.44□□□□□ -0.74
SHMT2-218ENST00000555213 MCATQ8IVS2 390 aaKnown RBP10.44□□□□□ -0.74
SHMT2-218ENST00000555213 DNAJC22Q8N4W6 341 aa10.44□□□□□ -0.74
SHMT2-218ENST00000555213 FITM2Q8N6M3 262 aa10.44□□□□□ -0.74
SHMT2-218ENST00000555213 ZNF655Q8N720 491 aaPredicted RBP10.44□□□□□ -0.74
SHMT2-218ENST00000555213 TTC29Q8NA56 475 aaPredicted RBP10.44□□□□□ -0.74
SHMT2-218ENST00000555213 ABHD11Q8NFV4 315 aa10.44□□□□□ -0.74
SHMT2-218ENST00000555213 PPP4R1Q8TF05 950 aa10.44□□□□□ -0.74
SHMT2-218ENST00000555213 SREK1Q8WXA9 508 aaKnown RBP10.44□□□□□ -0.74
SHMT2-218ENST00000555213 GATA6Q92908 595 aa10.44□□□□□ -0.74
SHMT2-218ENST00000555213 NEIL2Q969S2 332 aa10.44□□□□□ -0.74
SHMT2-218ENST00000555213 ZNF501Q96CX3 271 aaPredicted RBP10.44□□□□□ -0.74
SHMT2-218ENST00000555213 THAP11Q96EK4 314 aa10.44□□□□□ -0.74
SHMT2-218ENST00000555213 PRR11Q96HE9 360 aaPredicted RBP10.44□□□□□ -0.74
SHMT2-218ENST00000555213 PRAP1Q96NZ9 151 aa10.44□□□□□ -0.74
SHMT2-218ENST00000555213 OR4K3Q96R72 315 aa10.44□□□□□ -0.74
SHMT2-218ENST00000555213 AIF1LQ9BQI0 150 aa10.44□□□□□ -0.74
SHMT2-218ENST00000555213 NLNQ9BYT8 704 aa10.44□□□□□ -0.74
SHMT2-218ENST00000555213 MYLK2Q9H1R3 596 aa10.44□□□□□ -0.74
SHMT2-218ENST00000555213 TUBB1Q9H4B7 451 aa10.44□□□□□ -0.74
SHMT2-218ENST00000555213 NOL11Q9H8H0 719 aaKnown RBP10.44□□□□□ -0.74
SHMT2-218ENST00000555213 PELI2Q9HAT8 420 aa10.44□□□□□ -0.74
SHMT2-218ENST00000555213 FAM60AQ9NP50 221 aa10.44□□□□□ -0.74
SHMT2-218ENST00000555213 SEMA4BQ9NPR2 832 aaPredicted RBP10.44□□□□□ -0.74
SHMT2-218ENST00000555213 ASCL3Q9NQ33 180 aa10.44□□□□□ -0.74
SHMT2-218ENST00000555213 DKK4Q9UBT3 224 aa10.44□□□□□ -0.74
SHMT2-218ENST00000555213 SRPK3Q9UPE1 567 aa10.44□□□□□ -0.74
SHMT2-218ENST00000555213 B3GALT1Q9Y5Z6 326 aa10.44□□□□□ -0.74
SHMT2-218ENST00000555213 AP1M2Q9Y6Q5 423 aa10.44□□□□□ -0.74
SHMT2-218ENST00000555213 IGKV1-8A0A0C4DH67 115 aa10.43□□□□□ -0.74
SHMT2-218ENST00000555213 A0A0G2JND7 137 aa10.43□□□□□ -0.74
SHMT2-218ENST00000555213 A0A0J9YVX5 310 aa10.43□□□□□ -0.74
SHMT2-218ENST00000555213 CCT8L1PA6NM43 557 aa10.43□□□□□ -0.74
SHMT2-218ENST00000555213 CDRT15L2A8MXV6 281 aa10.43□□□□□ -0.74
SHMT2-218ENST00000555213 C9orf172C9J069 976 aa10.43□□□□□ -0.74
SHMT2-218ENST00000555213 TXNDC9O14530 226 aa10.43□□□□□ -0.74
SHMT2-218ENST00000555213 HAT1O14929 419 aa10.43□□□□□ -0.74
SHMT2-218ENST00000555213 HDAC3O15379 428 aa10.43□□□□□ -0.74
SHMT2-218ENST00000555213 SRPX2O60687 465 aaPredicted RBP10.43□□□□□ -0.74
SHMT2-218ENST00000555213 CTSVO60911 334 aa10.43□□□□□ -0.74
SHMT2-218ENST00000555213 CPNE3O75131 537 aaKnown RBP10.43□□□□□ -0.74
SHMT2-218ENST00000555213 SCRG1O75711 98 aa10.43□□□□□ -0.74
SHMT2-218ENST00000555213 HBQ1P09105 142 aa10.43□□□□□ -0.74
SHMT2-218ENST00000555213 TROVE2P10155 538 aaKnown RBP eCLIP10.43□□□□□ -0.74
SHMT2-218ENST00000555213 SERPINB3P29508 390 aa10.43□□□□□ -0.74
SHMT2-218ENST00000555213 ARL1P40616 181 aaPredicted RBP10.43□□□□□ -0.74
SHMT2-218ENST00000555213 NAA20P61599 178 aa10.43□□□□□ -0.74
SHMT2-218ENST00000555213 LCP2Q13094 533 aa10.43□□□□□ -0.74
SHMT2-218ENST00000555213 TRAF3Q13114 568 aa10.43□□□□□ -0.74
SHMT2-218ENST00000555213 GTF2H2Q13888 395 aa10.43□□□□□ -0.74
SHMT2-218ENST00000555213 GRM7Q14831 915 aa10.43□□□□□ -0.74
SHMT2-218ENST00000555213 ZSCAN26Q16670 478 aa10.43□□□□□ -0.74
SHMT2-218ENST00000555213 GALNTL6Q49A17 601 aa10.43□□□□□ -0.74
SHMT2-218ENST00000555213 PAGE2BQ5JRK9 111 aa10.43□□□□□ -0.74
SHMT2-218ENST00000555213 SH2D4BQ5SQS7 431 aa10.43□□□□□ -0.74
SHMT2-218ENST00000555213 KANK2Q63ZY3 851 aa10.43□□□□□ -0.74
SHMT2-218ENST00000555213 GTF2H2CQ6P1K8 395 aa10.43□□□□□ -0.74
SHMT2-218ENST00000555213 NXPE4Q6UWF7 544 aa10.43□□□□□ -0.74
SHMT2-218ENST00000555213 CLYBLQ8N0X4 340 aa10.43□□□□□ -0.74
SHMT2-218ENST00000555213 KRT78Q8N1N4 520 aa10.43□□□□□ -0.74
SHMT2-218ENST00000555213 TEX9Q8N6V9 391 aa10.43□□□□□ -0.74
SHMT2-218ENST00000555213 OR52B6Q8NGF0 335 aa10.43□□□□□ -0.74
SHMT2-218ENST00000555213 OR1L3Q8NH93 324 aa10.43□□□□□ -0.74
SHMT2-218ENST00000555213 AGR3Q8TD06 166 aa10.43□□□□□ -0.74
SHMT2-218ENST00000555213 CCT6BQ92526 530 aa10.43□□□□□ -0.74
SHMT2-218ENST00000555213 FGF11Q92914 225 aa10.43□□□□□ -0.74
SHMT2-218ENST00000555213 MAELQ96JY0 434 aaKnown RBP10.43□□□□□ -0.74
SHMT2-218ENST00000555213 C3orf30Q96M34 536 aa10.43□□□□□ -0.74
SHMT2-218ENST00000555213 OR52B2Q96RD2 323 aa10.43□□□□□ -0.74
SHMT2-218ENST00000555213 KCNA7Q96RP8 456 aa10.43□□□□□ -0.74
SHMT2-218ENST00000555213 EFCAB11Q9BUY7 163 aa10.43□□□□□ -0.74
SHMT2-218ENST00000555213 PITHD1Q9GZP4 211 aaPredicted RBP10.43□□□□□ -0.74
SHMT2-218ENST00000555213 EHD1Q9H4M9 534 aa10.43□□□□□ -0.74
SHMT2-218ENST00000555213 WDR55Q9H6Y2 383 aaPredicted RBP10.43□□□□□ -0.74
SHMT2-218ENST00000555213 APMAPQ9HDC9 416 aa10.43□□□□□ -0.74
SHMT2-218ENST00000555213 PRM3Q9NNZ6 103 aa10.43□□□□□ -0.74
SHMT2-218ENST00000555213 MID1IP1Q9NPA3 183 aa10.43□□□□□ -0.74
SHMT2-218ENST00000555213 FOXJ2Q9P0K8 574 aa10.43□□□□□ -0.74
SHMT2-218ENST00000555213 HEY2Q9UBP5 337 aa10.43□□□□□ -0.74
SHMT2-218ENST00000555213 ACSL6Q9UKU0 697 aa10.43□□□□□ -0.74
SHMT2-218ENST00000555213 SH2B3Q9UQQ2 575 aa10.43□□□□□ -0.74
SHMT2-218ENST00000555213 DNAJC15Q9Y5T4 150 aa10.43□□□□□ -0.74
SHMT2-218ENST00000555213 TRBC2A0A5B9 178 aa10.42□□□□□ -0.74
SHMT2-218ENST00000555213 SDHDO14521 159 aa10.42□□□□□ -0.74
SHMT2-218ENST00000555213 STK17BO94768 372 aa10.42□□□□□ -0.74
SHMT2-218ENST00000555213 KIAA0754O94854 1291 aa10.42□□□□□ -0.74
SHMT2-218ENST00000555213 OR4F21O95013 312 aa10.42□□□□□ -0.74
SHMT2-218ENST00000555213 ESRRBO95718 433 aa10.42□□□□□ -0.74
SHMT2-218ENST00000555213 EIF2S1P05198 315 aaKnown RBP10.42□□□□□ -0.74
SHMT2-218ENST00000555213 SLC35G6P0C7Q6 338 aa10.42□□□□□ -0.74
SHMT2-218ENST00000555213 C1GALT1C1LP0DN25 315 aa10.42□□□□□ -0.74
SHMT2-218ENST00000555213 GSTM2P28161 218 aa10.42□□□□□ -0.74
SHMT2-218ENST00000555213 VSX2P58304 361 aaPredicted RBP10.42□□□□□ -0.74
SHMT2-218ENST00000555213 YBX1P67809 324 aaKnown RBP10.42□□□□□ -0.74
SHMT2-218ENST00000555213 CSNK1G2P78368 415 aa10.42□□□□□ -0.74
SHMT2-218ENST00000555213 REEP5Q00765 189 aa10.42□□□□□ -0.74
SHMT2-218ENST00000555213 IRF8Q02556 426 aa10.42□□□□□ -0.74
SHMT2-218ENST00000555213 BTKQ06187 659 aa10.42□□□□□ -0.74
SHMT2-218ENST00000555213 PCDH1Q08174 1060 aa10.42□□□□□ -0.74
SHMT2-218ENST00000555213 IFT88Q13099 833 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms