RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 TMIGD1Q6UXZ0 262 aa10.3□□□□□ -0.76
TDP1-211ENST00000555178 TRPM8Q7Z2W7 1104 aa10.3□□□□□ -0.76
TDP1-211ENST00000555178 TRIM46Q7Z4K8 759 aa10.3□□□□□ -0.76
TDP1-211ENST00000555178 CLNKQ7Z7G1 428 aa10.3□□□□□ -0.76
TDP1-211ENST00000555178 TREML1Q86YW5 311 aa10.3□□□□□ -0.76
TDP1-211ENST00000555178 LAS2Q8IYD9 372 aa10.3□□□□□ -0.76
TDP1-211ENST00000555178 ACTRT2Q8TDY3 377 aa10.3□□□□□ -0.76
TDP1-211ENST00000555178 NUDT8Q8WV74 236 aa10.3□□□□□ -0.76
TDP1-211ENST00000555178 CCT6BQ92526 530 aa10.3□□□□□ -0.76
TDP1-211ENST00000555178 AHCYL2Q96HN2 611 aaKnown RBP10.3□□□□□ -0.76
TDP1-211ENST00000555178 LRRC37BQ96QE4 947 aa10.3□□□□□ -0.76
TDP1-211ENST00000555178 OR51B5Q9H339 312 aa10.3□□□□□ -0.76
TDP1-211ENST00000555178 SAR1AQ9NR31 198 aa10.3□□□□□ -0.76
TDP1-211ENST00000555178 STARD5Q9NSY2 213 aa10.3□□□□□ -0.76
TDP1-211ENST00000555178 SLC12A4Q9UP95 1085 aa10.3□□□□□ -0.76
TDP1-211ENST00000555178 SEC16AO15027 2179 aa10.3□□□□□ -0.76
TDP1-211ENST00000555178 CELSR3Q9NYQ7 3312 aa10.3□□□□□ -0.76
TDP1-211ENST00000555178 OR2A25A4D2G3 310 aa10.3□□□□□ -0.76
TDP1-211ENST00000555178 FAM221BA6H8Z2 402 aa10.3□□□□□ -0.76
TDP1-211ENST00000555178 TM4SF5O14894 197 aa10.3□□□□□ -0.76
TDP1-211ENST00000555178 TGFB1P01137 390 aa10.3□□□□□ -0.76
TDP1-211ENST00000555178 CDH3P22223 829 aa10.3□□□□□ -0.76
TDP1-211ENST00000555178 RPL38P63173 70 aaKnown RBP10.3□□□□□ -0.76
TDP1-211ENST00000555178 ZSCAN26Q16670 478 aa10.3□□□□□ -0.76
TDP1-211ENST00000555178 IMPG1Q17R60 797 aa10.3□□□□□ -0.76
TDP1-211ENST00000555178 AP5B1Q2VPB7 878 aa10.3□□□□□ -0.76
TDP1-211ENST00000555178 PAGE2BQ5JRK9 111 aa10.3□□□□□ -0.76
TDP1-211ENST00000555178 C6orf136Q5SQH8 315 aa10.3□□□□□ -0.76
TDP1-211ENST00000555178 CEP70Q8NHQ1 597 aa10.3□□□□□ -0.76
TDP1-211ENST00000555178 APIPQ96GX9 242 aa10.3□□□□□ -0.76
TDP1-211ENST00000555178 AIF1LQ9BQI0 150 aa10.3□□□□□ -0.76
TDP1-211ENST00000555178 CCDC28BQ9BUN5 200 aa10.3□□□□□ -0.76
TDP1-211ENST00000555178 MRPL1Q9BYD6 325 aaKnown RBP10.3□□□□□ -0.76
TDP1-211ENST00000555178 ZNF385DQ9H6B1 395 aa10.3□□□□□ -0.76
TDP1-211ENST00000555178 DMRT3Q9NQL9 472 aa10.3□□□□□ -0.76
TDP1-211ENST00000555178 ZFP69BQ9UJL9 534 aa10.3□□□□□ -0.76
TDP1-211ENST00000555178 PILRAQ9UKJ1 303 aa10.3□□□□□ -0.76
TDP1-211ENST00000555178 PCDHGA11Q9Y5H2 935 aa10.3□□□□□ -0.76
TDP1-211ENST00000555178 COPG1Q9Y678 874 aaKnown RBP10.3□□□□□ -0.76
TDP1-211ENST00000555178 CROCCQ5TZA2 2017 aa10.29□□□□□ -0.76
TDP1-211ENST00000555178 A0A0J9YVX5 310 aa10.29□□□□□ -0.76
TDP1-211ENST00000555178 IGHV5-10-1A0A0J9YXX1 117 aa10.29□□□□□ -0.76
TDP1-211ENST00000555178 A0A0J9YY10 115 aa10.29□□□□□ -0.76
TDP1-211ENST00000555178 NTN3O00634 580 aaPredicted RBP10.29□□□□□ -0.76
TDP1-211ENST00000555178 P2RX6O15547 441 aa10.29□□□□□ -0.76
TDP1-211ENST00000555178 TNFSF14O43557 240 aa10.29□□□□□ -0.76
TDP1-211ENST00000555178 DUX1O43812 170 aa10.29□□□□□ -0.76
TDP1-211ENST00000555178 GFRA3O60609 400 aa10.29□□□□□ -0.76
TDP1-211ENST00000555178 UBOX5O94941 541 aa10.29□□□□□ -0.76
TDP1-211ENST00000555178 SERPINA6P08185 405 aa10.29□□□□□ -0.76
TDP1-211ENST00000555178 PNLIPP16233 465 aa10.29□□□□□ -0.76
TDP1-211ENST00000555178 SLC5A12Q1EHB4 618 aa10.29□□□□□ -0.76
TDP1-211ENST00000555178 ATP6AP1LQ52LC2 224 aa10.29□□□□□ -0.76
TDP1-211ENST00000555178 VN1R4Q7Z5H5 301 aa10.29□□□□□ -0.76
TDP1-211ENST00000555178 KIRREL3Q8IZU9 778 aa10.29□□□□□ -0.76
TDP1-211ENST00000555178 FNDC5Q8NAU1 212 aa10.29□□□□□ -0.76
TDP1-211ENST00000555178 OR9I1Q8NGQ6 314 aa10.29□□□□□ -0.76
TDP1-211ENST00000555178 SLC22A18Q96BI1 424 aa10.29□□□□□ -0.76
TDP1-211ENST00000555178 SORBS1Q9BX66 1292 aaKnown RBP10.29□□□□□ -0.76
TDP1-211ENST00000555178 KLHL31Q9H511 634 aa10.29□□□□□ -0.76
TDP1-211ENST00000555178 POLR3HQ9Y535 204 aaPredicted RBP10.29□□□□□ -0.76
TDP1-211ENST00000555178 MN1Q10571 1320 aaPredicted RBP10.29□□□□□ -0.76
TDP1-211ENST00000555178 CCT8L1PA6NM43 557 aa10.29□□□□□ -0.76
TDP1-211ENST00000555178 UBDO15205 165 aa10.29□□□□□ -0.76
TDP1-211ENST00000555178 RASSF9O75901 435 aa10.29□□□□□ -0.76
TDP1-211ENST00000555178 DCTN3O75935 186 aa10.29□□□□□ -0.76
TDP1-211ENST00000555178 MED26O95402 600 aa10.29□□□□□ -0.76
TDP1-211ENST00000555178 CBX6O95503 412 aa10.29□□□□□ -0.76
TDP1-211ENST00000555178 SERPIND1P05546 499 aa10.29□□□□□ -0.76
TDP1-211ENST00000555178 LBPP18428 481 aa10.29□□□□□ -0.76
TDP1-211ENST00000555178 GABRA4P48169 554 aa10.29□□□□□ -0.76
TDP1-211ENST00000555178 ABATP80404 500 aa10.29□□□□□ -0.76
TDP1-211ENST00000555178 HYAL2Q12891 473 aa10.29□□□□□ -0.76
TDP1-211ENST00000555178 PRAMEF17Q5VTA0 474 aa10.29□□□□□ -0.76
TDP1-211ENST00000555178 CACHD1Q5VU97 1274 aa10.29□□□□□ -0.76
TDP1-211ENST00000555178 ARMC6Q6NXE6 501 aa10.29□□□□□ -0.76
TDP1-211ENST00000555178 CHSY3Q70JA7 882 aa10.29□□□□□ -0.76
TDP1-211ENST00000555178 KRT78Q8N1N4 520 aa10.29□□□□□ -0.76
TDP1-211ENST00000555178 CCDC106Q9BWC9 280 aa10.29□□□□□ -0.76
TDP1-211ENST00000555178 EBPLQ9BY08 206 aa10.29□□□□□ -0.76
TDP1-211ENST00000555178 EPHA6Q9UF33 1036 aa10.29□□□□□ -0.76
TDP1-211ENST00000555178 DLGAP4Q9Y2H0 992 aa10.29□□□□□ -0.76
TDP1-211ENST00000555178 MRPS2Q9Y399 296 aaKnown RBP10.29□□□□□ -0.76
TDP1-211ENST00000555178 ENTPD2Q9Y5L3 495 aa10.29□□□□□ -0.76
TDP1-211ENST00000555178 A0A0G2JN53 185 aa10.28□□□□□ -0.76
TDP1-211ENST00000555178 SLC28A1O00337 649 aa10.28□□□□□ -0.76
TDP1-211ENST00000555178 EBAG9O00559 213 aa10.28□□□□□ -0.76
TDP1-211ENST00000555178 ZW10O43264 779 aa10.28□□□□□ -0.76
TDP1-211ENST00000555178 RGS14O43566 566 aa10.28□□□□□ -0.76
TDP1-211ENST00000555178 SEC22BO75396 215 aa10.28□□□□□ -0.76
TDP1-211ENST00000555178 CCNDBP1O95273 360 aa10.28□□□□□ -0.76
TDP1-211ENST00000555178 CPNE6O95741 557 aa10.28□□□□□ -0.76
TDP1-211ENST00000555178 GBAP04062 536 aa10.28□□□□□ -0.76
TDP1-211ENST00000555178 EZRP15311 586 aaKnown RBP10.28□□□□□ -0.76
TDP1-211ENST00000555178 FOLR1P15328 257 aa10.28□□□□□ -0.76
TDP1-211ENST00000555178 HNRNPH1P31943 449 aaKnown RBP10.28□□□□□ -0.76
TDP1-211ENST00000555178 SCTRP47872 440 aa10.28□□□□□ -0.76
TDP1-211ENST00000555178 GPLD1P80108 840 aa10.28□□□□□ -0.76
TDP1-211ENST00000555178 LAPTM5Q13571 262 aa10.28□□□□□ -0.76
TDP1-211ENST00000555178 KIAA0040Q15053 153 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms