RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 BRWD1Q9NSI6 2320 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 LRRC72A6NJI9 287 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 OR52A4PA6NMU1 304 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 ZNF839A8K0R7 811 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 ATP6V1G1O75348 118 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 PCNAP12004 261 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 OXTRP30559 389 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 BSGP35613 385 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 MTPNP58546 118 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 EIF2B5Q13144 721 aaKnown RBP8.54□□□□□ -1.04
TDP1-210ENST00000554976 TMED1Q13445 227 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 CCDC85BQ15834 202 aaPredicted RBP8.54□□□□□ -1.04
TDP1-210ENST00000554976 FAM71E1Q6IPT2 247 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 COMMD6Q7Z4G1 85 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 DHFR2Q86XF0 187 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 ADGRF3Q8IZF5 1079 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 FRMD1Q8N878 549 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 OR7A2PQ8NGA2 310 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 GOT1L1Q8NHS2 421 aaPredicted RBP8.54□□□□□ -1.04
TDP1-210ENST00000554976 GPBAR1Q8TDU6 330 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 HLA-CQ95604 372 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 CXorf40BQ96DE9 158 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 PPM1MQ96MI6 270 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 OR52E6Q96RD3 313 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 FERD3LQ96RJ6 166 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 MYOCQ99972 504 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 RPF2Q9H7B2 306 aaKnown RBP8.54□□□□□ -1.04
TDP1-210ENST00000554976 MYNNQ9NPC7 610 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 DNAH14Q0VDD8 3507 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 IGHV1OR15-9A0A0B4J2B8 117 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 GABRR3A8MPY1 467 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 FAM220BPB1ANY3 271 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 C4orf51C9J302 202 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 ERN1O75460 977 aaKnown RBP8.54□□□□□ -1.04
TDP1-210ENST00000554976 CYP4F3Q08477 520 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 MAPKAPK3Q16644 382 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 ZNF852Q6ZMS4 543 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 DTWD1Q8N5C7 304 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 OR13H1Q8NG92 308 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 HMGB4Q8WW32 186 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 ECSITQ9BQ95 431 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 RAB11FIP5Q9BXF6 653 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 GORASP2Q9H8Y8 452 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 CARS2Q9HA77 564 aaKnown RBP8.54□□□□□ -1.04
TDP1-210ENST00000554976 TMEM165Q9HC07 324 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 BCAP29Q9UHQ4 241 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 ADGRE2Q9UHX3 823 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 BTNL2Q9UIR0 455 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 CNOT11Q9UKZ1 510 aaKnown RBP8.54□□□□□ -1.04
TDP1-210ENST00000554976 NDRG2Q9UN36 371 aaKnown RBP8.54□□□□□ -1.04
TDP1-210ENST00000554976 GPSM3Q9Y4H4 160 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 MDC1Q14676 2089 aaKnown RBP8.53□□□□□ -1.04
TDP1-210ENST00000554976 PRAMEF26H0Y7S4 382 aa8.53□□□□□ -1.04
TDP1-210ENST00000554976 PLPP1O14494 284 aa8.53□□□□□ -1.04
TDP1-210ENST00000554976 LCMT2O60294 686 aaKnown RBP8.53□□□□□ -1.04
TDP1-210ENST00000554976 TBX19O60806 448 aa8.53□□□□□ -1.04
TDP1-210ENST00000554976 SEMA3DO95025 777 aa8.53□□□□□ -1.04
TDP1-210ENST00000554976 SERPINB1P30740 379 aa8.53□□□□□ -1.04
TDP1-210ENST00000554976 ATXN3P54252 364 aaPredicted RBP8.53□□□□□ -1.04
TDP1-210ENST00000554976 SRP54P61011 504 aaKnown RBP8.53□□□□□ -1.04
TDP1-210ENST00000554976 PRDX1Q06830 199 aaKnown RBP8.53□□□□□ -1.04
TDP1-210ENST00000554976 ADPRMQ3LIE5 342 aa8.53□□□□□ -1.04
TDP1-210ENST00000554976 OR4F3Q6IEY1 312 aa8.53□□□□□ -1.04
TDP1-210ENST00000554976 ZNF425Q6IV72 752 aa8.53□□□□□ -1.04
TDP1-210ENST00000554976 ENPP7Q6UWV6 458 aa8.53□□□□□ -1.04
TDP1-210ENST00000554976 TMIGD1Q6UXZ0 262 aa8.53□□□□□ -1.04
TDP1-210ENST00000554976 SLC9B2Q86UD5 537 aa8.53□□□□□ -1.04
TDP1-210ENST00000554976 C2orf73Q8N5S3 287 aaPredicted RBP8.53□□□□□ -1.04
TDP1-210ENST00000554976 DNAJC9Q8WXX5 260 aa8.53□□□□□ -1.04
TDP1-210ENST00000554976 TSACCQ96A04 125 aaPredicted RBP8.53□□□□□ -1.04
TDP1-210ENST00000554976 BIRC7Q96CA5 298 aa8.53□□□□□ -1.04
TDP1-210ENST00000554976 ZBTB18Q99592 522 aa8.53□□□□□ -1.04
TDP1-210ENST00000554976 ZNF184Q99676 751 aaPredicted RBP8.53□□□□□ -1.04
TDP1-210ENST00000554976 REXO4Q9GZR2 422 aaKnown RBP8.53□□□□□ -1.04
TDP1-210ENST00000554976 LTB4R2Q9NPC1 389 aa8.53□□□□□ -1.04
TDP1-210ENST00000554976 FAM120CQ9NX05 1096 aaKnown RBP8.53□□□□□ -1.04
TDP1-210ENST00000554976 EGFL7Q9UHF1 273 aa8.53□□□□□ -1.04
TDP1-210ENST00000554976 KLK4Q9Y5K2 254 aa8.53□□□□□ -1.04
TDP1-210ENST00000554976 SNX13Q9Y5W8 968 aa8.53□□□□□ -1.04
TDP1-210ENST00000554976 C19orf67A6NJJ6 358 aa8.53□□□□□ -1.04
TDP1-210ENST00000554976 PCDH7O60245 1069 aa8.53□□□□□ -1.04
TDP1-210ENST00000554976 FURINP09958 794 aa8.53□□□□□ -1.04
TDP1-210ENST00000554976 LAMP1P11279 417 aa8.53□□□□□ -1.04
TDP1-210ENST00000554976 ZNF24P17028 368 aa8.53□□□□□ -1.04
TDP1-210ENST00000554976 AK4P27144 223 aaPredicted RBP8.53□□□□□ -1.04
TDP1-210ENST00000554976 FRKP42685 505 aaPredicted RBP8.53□□□□□ -1.04
TDP1-210ENST00000554976 SRSF11Q05519 484 aaKnown RBP8.53□□□□□ -1.04
TDP1-210ENST00000554976 CCDC6Q16204 474 aa8.53□□□□□ -1.04
TDP1-210ENST00000554976 DUOXA1Q1HG43 343 aa8.53□□□□□ -1.04
TDP1-210ENST00000554976 MUM1Q2TAK8 710 aa8.53□□□□□ -1.04
TDP1-210ENST00000554976 PTCRAQ6ISU1 281 aaPredicted RBP8.53□□□□□ -1.04
TDP1-210ENST00000554976 CYP2R1Q6VVX0 501 aa8.53□□□□□ -1.04
TDP1-210ENST00000554976 C17orf64Q86WR6 236 aa8.53□□□□□ -1.04
TDP1-210ENST00000554976 SPPL2CQ8IUH8 684 aa8.53□□□□□ -1.04
TDP1-210ENST00000554976 SYT12Q8IV01 421 aa8.53□□□□□ -1.04
TDP1-210ENST00000554976 PGBD3Q8N328 593 aa8.53□□□□□ -1.04
TDP1-210ENST00000554976 FBXL6Q8N531 539 aa8.53□□□□□ -1.04
TDP1-210ENST00000554976 C16orf78Q8WTQ4 265 aa8.53□□□□□ -1.04
TDP1-210ENST00000554976 UBE2E3Q969T4 207 aa8.53□□□□□ -1.04
TDP1-210ENST00000554976 TOE1Q96GM8 510 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms