RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 ARMC6Q6NXE6 501 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 SPNS3Q6ZMD2 512 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 ZNF517Q6ZMY9 492 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-228ENST00000554592 CREBRFQ8IUR6 639 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 CCDC28AQ8IWP9 274 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 SLC15A3Q8IY34 581 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 NDUFAF2Q8N183 169 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 PYROXD2Q8N2H3 581 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 MYRIPQ8NFW9 859 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 GPT2Q8TD30 523 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 FAM172AQ8WUF8 416 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 TMEM171Q8WVE6 324 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 UBE2Q2Q8WVN8 375 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 TM9SF4Q92544 642 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 MR1Q95460 341 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 FAM136AQ96C01 138 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 HDAC11Q96DB2 347 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 COX14Q96I36 57 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 NSMCE3Q96MG7 304 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 PSKH2Q96QS6 385 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 NLNQ9BYT8 704 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 SLC39A8Q9C0K1 460 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 RAB33BQ9H082 229 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 ILKAPQ9H0C8 392 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-228ENST00000554592 SYNPO2LQ9H987 977 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 CHST11Q9NPF2 352 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 WASH6PQ9NQA3 447 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 VPS18Q9P253 973 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 SEMA5BQ9P283 1151 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 GRHPRQ9UBQ7 328 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 SNX7Q9UNH6 387 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 OSGIN2Q9Y236 505 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 KCNK6Q9Y257 313 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 PPIL1Q9Y3C6 166 aa4.72□□□□□ -1.65
ATXN3-228ENST00000554592 KLF2Q9Y5W3 355 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-228ENST00000554592 CSMD1Q96PZ7 3565 aa4.71□□□□□ -1.66
ATXN3-228ENST00000554592 NPIPB15A6NHN6 443 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-228ENST00000554592 PIP5K1BO14986 540 aa4.71□□□□□ -1.66
ATXN3-228ENST00000554592 GRID2O43424 1007 aa4.71□□□□□ -1.66
ATXN3-228ENST00000554592 ZG16O60844 167 aa4.71□□□□□ -1.66
ATXN3-228ENST00000554592 SCRG1O75711 98 aa4.71□□□□□ -1.66
ATXN3-228ENST00000554592 PGLSO95336 258 aa4.71□□□□□ -1.66
ATXN3-228ENST00000554592 JCHAINP01591 159 aa4.71□□□□□ -1.66
ATXN3-228ENST00000554592 IGHEP01854 428 aa4.71□□□□□ -1.66
ATXN3-228ENST00000554592 ACP5P13686 325 aa4.71□□□□□ -1.66
ATXN3-228ENST00000554592 FOLR1P15328 257 aa4.71□□□□□ -1.66
ATXN3-228ENST00000554592 PECAM1P16284 738 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-228ENST00000554592 GPD1P21695 349 aa4.71□□□□□ -1.66
ATXN3-228ENST00000554592 LHCGRP22888 699 aa4.71□□□□□ -1.66
ATXN3-228ENST00000554592 MMP8P22894 467 aa4.71□□□□□ -1.66
ATXN3-228ENST00000554592 RFC1P35251 1148 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-228ENST00000554592 HSPA9P38646 679 aaKnown RBP4.71□□□□□ -1.66
ATXN3-228ENST00000554592 GSDMDP57764 484 aa4.71□□□□□ -1.66
ATXN3-228ENST00000554592 TPI1P60174 286 aa4.71□□□□□ -1.66
ATXN3-228ENST00000554592 IL10RBQ08334 325 aa4.71□□□□□ -1.66
ATXN3-228ENST00000554592 PKP1Q13835 747 aa4.71□□□□□ -1.66
ATXN3-228ENST00000554592 TMEM95Q3KNT9 176 aa4.71□□□□□ -1.66
ATXN3-228ENST00000554592 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.71□□□□□ -1.66
ATXN3-228ENST00000554592 TAF3Q5VWG9 929 aa4.71□□□□□ -1.66
ATXN3-228ENST00000554592 NAA35Q5VZE5 725 aa4.71□□□□□ -1.66
ATXN3-228ENST00000554592 IRGCQ6NXR0 463 aa4.71□□□□□ -1.66
ATXN3-228ENST00000554592 SCYL2Q6P3W7 929 aa4.71□□□□□ -1.66
ATXN3-228ENST00000554592 KLHL35Q6PF15 583 aa4.71□□□□□ -1.66
ATXN3-228ENST00000554592 WDR59Q6PJI9 974 aa4.71□□□□□ -1.66
ATXN3-228ENST00000554592 Q6ZS92 163 aa4.71□□□□□ -1.66
ATXN3-228ENST00000554592 RFLNAQ6ZTI6 216 aa4.71□□□□□ -1.66
ATXN3-228ENST00000554592 FAM92BQ6ZTR7 304 aa4.71□□□□□ -1.66
ATXN3-228ENST00000554592 TSPAN33Q86UF1 283 aa4.71□□□□□ -1.66
ATXN3-228ENST00000554592 TRIM74Q86UV6 250 aa4.71□□□□□ -1.66
ATXN3-228ENST00000554592 KCNMB4Q86W47 210 aa4.71□□□□□ -1.66
ATXN3-228ENST00000554592 ZNF677Q86XU0 584 aa4.71□□□□□ -1.66
ATXN3-228ENST00000554592 KMT5CQ86Y97 462 aa4.71□□□□□ -1.66
ATXN3-228ENST00000554592 HSCBQ8IWL3 235 aa4.71□□□□□ -1.66
ATXN3-228ENST00000554592 SPARTQ8N0X7 666 aa4.71□□□□□ -1.66
ATXN3-228ENST00000554592 ZADH2Q8N4Q0 377 aa4.71□□□□□ -1.66
ATXN3-228ENST00000554592 ZBTB2Q8N680 514 aa4.71□□□□□ -1.66
ATXN3-228ENST00000554592 SIDT2Q8NBJ9 832 aaKnown RBP4.71□□□□□ -1.66
ATXN3-228ENST00000554592 OR8K5Q8NH50 307 aa4.71□□□□□ -1.66
ATXN3-228ENST00000554592 JOSD2Q8TAC2 188 aa4.71□□□□□ -1.66
ATXN3-228ENST00000554592 SLC30A5Q8TAD4 765 aa4.71□□□□□ -1.66
ATXN3-228ENST00000554592 FAM71BQ8TC56 605 aa4.71□□□□□ -1.66
ATXN3-228ENST00000554592 STYXQ8WUJ0 223 aa4.71□□□□□ -1.66
ATXN3-228ENST00000554592 CCT6BQ92526 530 aa4.71□□□□□ -1.66
ATXN3-228ENST00000554592 SNX21Q969T3 373 aa4.71□□□□□ -1.66
ATXN3-228ENST00000554592 CELF6Q96J87 481 aaKnown RBP4.71□□□□□ -1.66
ATXN3-228ENST00000554592 SLC41A2Q96JW4 573 aa4.71□□□□□ -1.66
ATXN3-228ENST00000554592 FER1L6-AS2Q96M78 137 aa4.71□□□□□ -1.66
ATXN3-228ENST00000554592 TIGD1Q96MW7 591 aa4.71□□□□□ -1.66
ATXN3-228ENST00000554592 LRFN5Q96NI6 719 aa4.71□□□□□ -1.66
ATXN3-228ENST00000554592 ZNF599Q96NL3 588 aa4.71□□□□□ -1.66
ATXN3-228ENST00000554592 AGAP3Q96P47 875 aa4.71□□□□□ -1.66
ATXN3-228ENST00000554592 IP6K3Q96PC2 410 aa4.71□□□□□ -1.66
ATXN3-228ENST00000554592 MCCC1Q96RQ3 725 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-228ENST00000554592 NUDCD1Q96RS6 583 aa4.71□□□□□ -1.66
ATXN3-228ENST00000554592 RIOK2Q9BVS4 552 aaKnown RBP4.71□□□□□ -1.66
ATXN3-228ENST00000554592 CARD9Q9H257 536 aa4.71□□□□□ -1.66
ATXN3-228ENST00000554592 ZBTB26Q9HCK0 441 aa4.71□□□□□ -1.66
ATXN3-228ENST00000554592 SIX2Q9NPC8 291 aa4.71□□□□□ -1.66
ATXN3-228ENST00000554592 LRFN1Q9P244 771 aa4.71□□□□□ -1.66
ATXN3-228ENST00000554592 ZNF624Q9P2J8 865 aaPredicted RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms