RNA–Protein interactions for RNA: ENST00000554315.5

NUMB-209, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 1 (best)

Gene NUMB, Length 1,740 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-209ENST00000554315 XKR6Q5GH73 641 aa13.1□□□□□ -0.31
NUMB-209ENST00000554315 EMBQ6PCB8 327 aa13.1□□□□□ -0.31
NUMB-209ENST00000554315 GSPT2Q8IYD1 628 aaKnown RBP13.1□□□□□ -0.31
NUMB-209ENST00000554315 UBE2E3Q969T4 207 aa13.1□□□□□ -0.31
NUMB-209ENST00000554315 MIEF2Q96C03 454 aa13.1□□□□□ -0.31
NUMB-209ENST00000554315 PTCD3Q96EY7 689 aaKnown RBP13.1□□□□□ -0.31
NUMB-209ENST00000554315 C10orf90Q96M02 699 aa13.1□□□□□ -0.31
NUMB-209ENST00000554315 EFCAB11Q9BUY7 163 aa13.1□□□□□ -0.31
NUMB-209ENST00000554315 CLK4Q9HAZ1 481 aaKnown RBP13.1□□□□□ -0.31
NUMB-209ENST00000554315 ANKHQ9HCJ1 492 aa13.1□□□□□ -0.31
NUMB-209ENST00000554315 MKKSQ9NPJ1 570 aaPredicted RBP13.1□□□□□ -0.31
NUMB-209ENST00000554315 SLC22A11Q9NSA0 550 aa13.1□□□□□ -0.31
NUMB-209ENST00000554315 MAU2Q9Y6X3 613 aa13.1□□□□□ -0.31
NUMB-209ENST00000554315 ANKRD12Q6UB98 2062 aa13.1□□□□□ -0.31
NUMB-209ENST00000554315 ANKDD1BA6NHY2 528 aa13.1□□□□□ -0.31
NUMB-209ENST00000554315 NDUFS4O43181 175 aa13.1□□□□□ -0.31
NUMB-209ENST00000554315 RFPL1O75677 317 aa13.1□□□□□ -0.31
NUMB-209ENST00000554315 NSA2O95478 260 aaKnown RBP13.1□□□□□ -0.31
NUMB-209ENST00000554315 ATXN8OSP0DMR3 200 aa13.1□□□□□ -0.31
NUMB-209ENST00000554315 MTHFD2P13995 350 aa13.1□□□□□ -0.31
NUMB-209ENST00000554315 GCAP28676 217 aa13.1□□□□□ -0.31
NUMB-209ENST00000554315 CASP2P42575 452 aa13.1□□□□□ -0.31
NUMB-209ENST00000554315 REEP5Q00765 189 aa13.1□□□□□ -0.31
NUMB-209ENST00000554315 MEF2AQ02078 507 aaPredicted RBP13.1□□□□□ -0.31
NUMB-209ENST00000554315 IRF8Q02556 426 aa13.1□□□□□ -0.31
NUMB-209ENST00000554315 RASA2Q15283 850 aa13.1□□□□□ -0.31
NUMB-209ENST00000554315 NKG7Q16617 165 aa13.1□□□□□ -0.31
NUMB-209ENST00000554315 PFKFB4Q16877 469 aa13.1□□□□□ -0.31
NUMB-209ENST00000554315 TMEM214Q6NUQ4 689 aaKnown RBP13.1□□□□□ -0.31
NUMB-209ENST00000554315 MED25Q71SY5 747 aa13.1□□□□□ -0.31
NUMB-209ENST00000554315 ABHD13Q7L211 337 aa13.1□□□□□ -0.31
NUMB-209ENST00000554315 TDRPQ86YL5 185 aa13.1□□□□□ -0.31
NUMB-209ENST00000554315 NT5CQ8TCD5 201 aa13.1□□□□□ -0.31
NUMB-209ENST00000554315 UBTD2Q8WUN7 234 aa13.1□□□□□ -0.31
NUMB-209ENST00000554315 SLC39A7Q92504 469 aa13.1□□□□□ -0.31
NUMB-209ENST00000554315 ESAMQ96AP7 390 aa13.1□□□□□ -0.31
NUMB-209ENST00000554315 FER1L6-AS2Q96M78 137 aa13.1□□□□□ -0.31
NUMB-209ENST00000554315 TMEM79Q9BSE2 394 aa13.1□□□□□ -0.31
NUMB-209ENST00000554315 EPB41L4BQ9H329 900 aa13.1□□□□□ -0.31
NUMB-209ENST00000554315 SEMA3GQ9NS98 782 aa13.1□□□□□ -0.31
NUMB-209ENST00000554315 TRPC4Q9UBN4 977 aa13.1□□□□□ -0.31
NUMB-209ENST00000554315 DCDC2Q9UHG0 476 aa13.1□□□□□ -0.31
NUMB-209ENST00000554315 TUBD1Q9UJT1 453 aa13.1□□□□□ -0.31
NUMB-209ENST00000554315 MAP4K5Q9Y4K4 846 aa13.1□□□□□ -0.31
NUMB-209ENST00000554315 KCNMB2Q9Y691 235 aa13.1□□□□□ -0.31
NUMB-209ENST00000554315 A0A0A6YYC8 382 aaPredicted RBP13.09□□□□□ -0.31
NUMB-209ENST00000554315 VSTM2BA6NLU5 285 aa13.09□□□□□ -0.31
NUMB-209ENST00000554315 I3L1I5 382 aaPredicted RBP13.09□□□□□ -0.31
NUMB-209ENST00000554315 PCDH17O14917 1159 aa13.09□□□□□ -0.31
NUMB-209ENST00000554315 KLK8O60259 260 aa13.09□□□□□ -0.31
NUMB-209ENST00000554315 SERPINA6P08185 405 aa13.09□□□□□ -0.31
NUMB-209ENST00000554315 GSTA1P08263 222 aa13.09□□□□□ -0.31
NUMB-209ENST00000554315 IL10P22301 178 aa13.09□□□□□ -0.31
NUMB-209ENST00000554315 GMPRP36959 345 aa13.09□□□□□ -0.31
NUMB-209ENST00000554315 STXBP1P61764 594 aaKnown RBP13.09□□□□□ -0.31
NUMB-209ENST00000554315 VSNL1P62760 191 aa13.09□□□□□ -0.31
NUMB-209ENST00000554315 PCDH1Q08174 1060 aa13.09□□□□□ -0.31
NUMB-209ENST00000554315 SETDB1Q15047 1291 aa13.09□□□□□ -0.31
NUMB-209ENST00000554315 PCBP2Q15366 365 aaKnown RBP eCLIP13.09□□□□□ -0.311e-8■■■■■ 36
NUMB-209ENST00000554315 LINC00303Q3SY05 128 aa13.09□□□□□ -0.31
NUMB-209ENST00000554315 TECRLQ5HYJ1 363 aa13.09□□□□□ -0.31
NUMB-209ENST00000554315 APLFQ8IW19 511 aaPredicted RBP13.09□□□□□ -0.31
NUMB-209ENST00000554315 PLD6Q8N2A8 252 aaKnown RBP13.09□□□□□ -0.31
NUMB-209ENST00000554315 ARHGEF39Q8N4T4 335 aa13.09□□□□□ -0.31
NUMB-209ENST00000554315 METTL27Q8N6F8 245 aaPredicted RBP13.09□□□□□ -0.31
NUMB-209ENST00000554315 TMEM102Q8N9M5 508 aaPredicted RBP13.09□□□□□ -0.31
NUMB-209ENST00000554315 ZNF740Q8NDX6 193 aa13.09□□□□□ -0.31
NUMB-209ENST00000554315 STT3BQ8TCJ2 826 aa13.09□□□□□ -0.31
NUMB-209ENST00000554315 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.09□□□□□ -0.31
NUMB-209ENST00000554315 WDR34Q96EX3 536 aa13.09□□□□□ -0.31
NUMB-209ENST00000554315 TGIF2Q9GZN2 237 aa13.09□□□□□ -0.31
NUMB-209ENST00000554315 MRPL46Q9H2W6 279 aaKnown RBP13.09□□□□□ -0.31
NUMB-209ENST00000554315 C14orf105Q9NVL8 296 aa13.09□□□□□ -0.31
NUMB-209ENST00000554315 GEMIN8Q9NWZ8 242 aaKnown RBP13.09□□□□□ -0.31
NUMB-209ENST00000554315 CPSF2Q9P2I0 782 aaKnown RBP13.09□□□□□ -0.31
NUMB-209ENST00000554315 COPG2Q9UBF2 871 aa13.09□□□□□ -0.31
NUMB-209ENST00000554315 G3BP2Q9UN86 482 aaKnown RBP13.09□□□□□ -0.31
NUMB-209ENST00000554315 HEATR5BQ9P2D3 2071 aa13.09□□□□□ -0.31
NUMB-209ENST00000554315 IGLV3-12A0A075B6K2 115 aa13.08□□□□□ -0.32
NUMB-209ENST00000554315 P2RX6O15547 441 aa13.08□□□□□ -0.32
NUMB-209ENST00000554315 FOXS1O43638 330 aa13.08□□□□□ -0.32
NUMB-209ENST00000554315 KLHL41O60662 606 aa13.08□□□□□ -0.32
NUMB-209ENST00000554315 CDH16O75309 829 aa13.08□□□□□ -0.32
NUMB-209ENST00000554315 FURINP09958 794 aa13.08□□□□□ -0.32
NUMB-209ENST00000554315 ZGLP1P0C6A0 271 aa13.08□□□□□ -0.32
NUMB-209ENST00000554315 TAC1P20366 129 aa13.08□□□□□ -0.32
NUMB-209ENST00000554315 MMP11P24347 488 aa13.08□□□□□ -0.32
NUMB-209ENST00000554315 VARSP26640 1264 aaKnown RBP13.08□□□□□ -0.32
NUMB-209ENST00000554315 OTX2P32243 289 aa13.08□□□□□ -0.32
NUMB-209ENST00000554315 NFKB2Q00653 900 aa13.08□□□□□ -0.32
NUMB-209ENST00000554315 CHIT1Q13231 466 aa13.08□□□□□ -0.32
NUMB-209ENST00000554315 DOC2AQ14183 400 aa13.08□□□□□ -0.32
NUMB-209ENST00000554315 SLBPQ14493 270 aaKnown RBP eCLIP13.08□□□□□ -0.32
NUMB-209ENST00000554315 NAA30Q147X3 362 aaPredicted RBP13.08□□□□□ -0.32
NUMB-209ENST00000554315 ERCC6LQ2NKX8 1250 aa13.08□□□□□ -0.32
NUMB-209ENST00000554315 ATP1A1-AS1Q5TC04 95 aa13.08□□□□□ -0.32
NUMB-209ENST00000554315 TEX9Q8N6V9 391 aa13.08□□□□□ -0.32
NUMB-209ENST00000554315 KCT2Q8NC54 265 aa13.08□□□□□ -0.32
NUMB-209ENST00000554315 ADAMTS17Q8TE56 1095 aa13.08□□□□□ -0.32
NUMB-209ENST00000554315 ACSS2Q9NR19 701 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms