RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 CAB39LQ9H9S4 337 aa12.43□□□□□ -0.42
SHMT2-211ENST00000554310 MLXIPLQ9NP71 852 aa12.43□□□□□ -0.42
SHMT2-211ENST00000554310 SEMA3GQ9NS98 782 aa12.43□□□□□ -0.42
SHMT2-211ENST00000554310 C14orf105Q9NVL8 296 aa12.43□□□□□ -0.42
SHMT2-211ENST00000554310 P4HTMQ9NXG6 502 aa12.43□□□□□ -0.42
SHMT2-211ENST00000554310 ZNF282Q9UDV7 671 aaPredicted RBP12.43□□□□□ -0.42
SHMT2-211ENST00000554310 PCDHGB7Q9Y5F8 929 aa12.43□□□□□ -0.42
SHMT2-211ENST00000554310 MAU2Q9Y6X3 613 aa12.43□□□□□ -0.42
SHMT2-211ENST00000554310 UBR5O95071 2799 aaPredicted RBP12.42□□□□□ -0.42
SHMT2-211ENST00000554310 PHGDHO43175 533 aaKnown RBP12.42□□□□□ -0.42
SHMT2-211ENST00000554310 ACSL3O95573 720 aa12.42□□□□□ -0.42
SHMT2-211ENST00000554310 SLC35G6P0C7Q6 338 aa12.42□□□□□ -0.42
SHMT2-211ENST00000554310 PHBP35232 272 aa12.42□□□□□ -0.42
SHMT2-211ENST00000554310 CASRP41180 1078 aa12.42□□□□□ -0.42
SHMT2-211ENST00000554310 CCL11P51671 97 aa12.42□□□□□ -0.42
SHMT2-211ENST00000554310 FOXL2P58012 376 aa12.42□□□□□ -0.42
SHMT2-211ENST00000554310 RAB10P61026 200 aa12.42□□□□□ -0.42
SHMT2-211ENST00000554310 MAGOHP61326 146 aaKnown RBP12.42□□□□□ -0.42
SHMT2-211ENST00000554310 ATP6V0D1P61421 351 aa12.42□□□□□ -0.42
SHMT2-211ENST00000554310 KLRB1Q12918 225 aa12.42□□□□□ -0.42
SHMT2-211ENST00000554310 TSNQ15631 228 aaKnown RBP12.42□□□□□ -0.42
SHMT2-211ENST00000554310 ASPGQ86U10 573 aa12.42□□□□□ -0.42
SHMT2-211ENST00000554310 HPS6Q86YV9 775 aa12.42□□□□□ -0.42
SHMT2-211ENST00000554310 RIBC1Q8N443 379 aaPredicted RBP12.42□□□□□ -0.42
SHMT2-211ENST00000554310 TBC1D19Q8N5T2 526 aa12.42□□□□□ -0.42
SHMT2-211ENST00000554310 CAMKVQ8NCB2 501 aa12.42□□□□□ -0.42
SHMT2-211ENST00000554310 STT3BQ8TCJ2 826 aa12.42□□□□□ -0.42
SHMT2-211ENST00000554310 EPS8L3Q8TE67 593 aaKnown RBP12.42□□□□□ -0.42
SHMT2-211ENST00000554310 SLC5A11Q8WWX8 675 aa12.42□□□□□ -0.42
SHMT2-211ENST00000554310 MIEF2Q96C03 454 aa12.42□□□□□ -0.42
SHMT2-211ENST00000554310 OR4K3Q96R72 315 aa12.42□□□□□ -0.42
SHMT2-211ENST00000554310 EGFL8Q99944 293 aa12.42□□□□□ -0.42
SHMT2-211ENST00000554310 CCDC77Q9BR77 488 aa12.42□□□□□ -0.42
SHMT2-211ENST00000554310 CRB3Q9BUF7 120 aa12.42□□□□□ -0.42
SHMT2-211ENST00000554310 SARGQ9BW04 601 aa12.42□□□□□ -0.42
SHMT2-211ENST00000554310 SOX17Q9H6I2 414 aaPredicted RBP12.42□□□□□ -0.42
SHMT2-211ENST00000554310 GPR83Q9NYM4 423 aa12.42□□□□□ -0.42
SHMT2-211ENST00000554310 RP1L1Q8IWN7 2480 aaPredicted RBP12.42□□□□□ -0.42
SHMT2-211ENST00000554310 TNRC6AQ8NDV7 1962 aaKnown RBP12.41□□□□□ -0.42
SHMT2-211ENST00000554310 A0A087WUV0 522 aaPredicted RBP12.41□□□□□ -0.42
SHMT2-211ENST00000554310 TRBC2A0A5B9 178 aa12.41□□□□□ -0.42
SHMT2-211ENST00000554310 TLDC2A0PJX2 215 aa12.41□□□□□ -0.42
SHMT2-211ENST00000554310 ERICH4A6NGS2 130 aa12.41□□□□□ -0.42
SHMT2-211ENST00000554310 KLHL41O60662 606 aa12.41□□□□□ -0.42
SHMT2-211ENST00000554310 PDGFAP04085 211 aa12.41□□□□□ -0.42
SHMT2-211ENST00000554310 ZGLP1P0C6A0 271 aa12.41□□□□□ -0.42
SHMT2-211ENST00000554310 CCDC166P0CW27 439 aa12.41□□□□□ -0.42
SHMT2-211ENST00000554310 HPDP32754 393 aaPredicted RBP12.41□□□□□ -0.42
SHMT2-211ENST00000554310 SLC26A3P40879 764 aa12.41□□□□□ -0.42
SHMT2-211ENST00000554310 BCL6P41182 706 aa12.41□□□□□ -0.42
SHMT2-211ENST00000554310 AVPR1BP47901 424 aa12.41□□□□□ -0.42
SHMT2-211ENST00000554310 KLC1Q07866 573 aa12.41□□□□□ -0.42
SHMT2-211ENST00000554310 CSHL1Q14406 222 aa12.41□□□□□ -0.42
SHMT2-211ENST00000554310 RBBP7Q16576 425 aa12.41□□□□□ -0.42
SHMT2-211ENST00000554310 CDKL4Q5MAI5 379 aa12.41□□□□□ -0.42
SHMT2-211ENST00000554310 TMEM214Q6NUQ4 689 aaKnown RBP12.41□□□□□ -0.42
SHMT2-211ENST00000554310 THOC6Q86W42 341 aaKnown RBP12.41□□□□□ -0.42
SHMT2-211ENST00000554310 KLHDC8AQ8IYD2 350 aa12.41□□□□□ -0.42
SHMT2-211ENST00000554310 TCAIMQ8N3R3 496 aa12.41□□□□□ -0.42
SHMT2-211ENST00000554310 AMER3Q8N944 861 aa12.41□□□□□ -0.42
SHMT2-211ENST00000554310 MFSD9Q8NBP5 474 aa12.41□□□□□ -0.42
SHMT2-211ENST00000554310 OR4K1Q8NGD4 311 aa12.41□□□□□ -0.42
SHMT2-211ENST00000554310 UHMK1Q8TAS1 419 aaKnown RBP12.41□□□□□ -0.42
SHMT2-211ENST00000554310 NEIL2Q969S2 332 aa12.41□□□□□ -0.42
SHMT2-211ENST00000554310 MMABQ96EY8 250 aaPredicted RBP12.41□□□□□ -0.42
SHMT2-211ENST00000554310 PPCSQ9HAB8 311 aa12.41□□□□□ -0.42
SHMT2-211ENST00000554310 PELI2Q9HAT8 420 aa12.41□□□□□ -0.42
SHMT2-211ENST00000554310 MKKSQ9NPJ1 570 aaPredicted RBP12.41□□□□□ -0.42
SHMT2-211ENST00000554310 TRPC4Q9UBN4 977 aa12.41□□□□□ -0.42
SHMT2-211ENST00000554310 LGALS13Q9UHV8 139 aa12.41□□□□□ -0.42
SHMT2-211ENST00000554310 FBXL4Q9UKA2 621 aa12.41□□□□□ -0.42
SHMT2-211ENST00000554310 DYRK1BQ9Y463 629 aa12.41□□□□□ -0.42
SHMT2-211ENST00000554310 ZNF451Q9Y4E5 1061 aa12.41□□□□□ -0.42
SHMT2-211ENST00000554310 MAP4K5Q9Y4K4 846 aa12.41□□□□□ -0.42
SHMT2-211ENST00000554310 HS3ST3B1Q9Y662 390 aa12.41□□□□□ -0.42
SHMT2-211ENST00000554310 KCNE2Q9Y6J6 123 aa12.41□□□□□ -0.42
SHMT2-211ENST00000554310 A0A0A6YYC8 382 aaPredicted RBP12.4□□□□□ -0.42
SHMT2-211ENST00000554310 FEZF1A0PJY2 475 aa12.4□□□□□ -0.42
SHMT2-211ENST00000554310 H0YIG0 161 aa12.4□□□□□ -0.42
SHMT2-211ENST00000554310 I3L1I5 382 aaPredicted RBP12.4□□□□□ -0.42
SHMT2-211ENST00000554310 K7EM74 188 aa12.4□□□□□ -0.42
SHMT2-211ENST00000554310 SOCS6O14544 535 aa12.4□□□□□ -0.42
SHMT2-211ENST00000554310 PCDH17O14917 1159 aa12.4□□□□□ -0.42
SHMT2-211ENST00000554310 FOXS1O43638 330 aa12.4□□□□□ -0.42
SHMT2-211ENST00000554310 IPO13O94829 963 aaKnown RBP12.4□□□□□ -0.42
SHMT2-211ENST00000554310 NSA2O95478 260 aaKnown RBP12.4□□□□□ -0.42
SHMT2-211ENST00000554310 ALPPP05187 535 aa12.4□□□□□ -0.42
SHMT2-211ENST00000554310 CD1DP15813 335 aa12.4□□□□□ -0.42
SHMT2-211ENST00000554310 CRABP2P29373 138 aa12.4□□□□□ -0.42
SHMT2-211ENST00000554310 LSP1P33241 339 aa12.4□□□□□ -0.42
SHMT2-211ENST00000554310 SLC6A12P48065 614 aa12.4□□□□□ -0.42
SHMT2-211ENST00000554310 SOX8P57073 446 aa12.4□□□□□ -0.42
SHMT2-211ENST00000554310 REEP5Q00765 189 aa12.4□□□□□ -0.42
SHMT2-211ENST00000554310 EFTUD2Q15029 972 aaKnown RBP eCLIP12.4□□□□□ -0.421e-8■■■■■ 30.9
SHMT2-211ENST00000554310 TGFBIQ15582 683 aa12.4□□□□□ -0.42
SHMT2-211ENST00000554310 ZSCAN26Q16670 478 aa12.4□□□□□ -0.42
SHMT2-211ENST00000554310 VWA5B1Q5TIE3 1220 aa12.4□□□□□ -0.42
SHMT2-211ENST00000554310 SHISA6Q6ZSJ9 500 aa12.4□□□□□ -0.42
SHMT2-211ENST00000554310 TAOK1Q7L7X3 1001 aa12.4□□□□□ -0.42
SHMT2-211ENST00000554310 CCDC91Q7Z6B0 441 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms