RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 VPS13AQ96RL7 3174 aa7.32□□□□□ -1.24
TDP1-209ENST00000554180 FEZF1A0PJY2 475 aa7.32□□□□□ -1.24
TDP1-209ENST00000554180 DYTNA2CJ06 578 aa7.32□□□□□ -1.24
TDP1-209ENST00000554180 FLRT2O43155 660 aa7.32□□□□□ -1.24
TDP1-209ENST00000554180 FOXD2O60548 495 aaPredicted RBP7.32□□□□□ -1.24
TDP1-209ENST00000554180 MYO1DO94832 1006 aa7.32□□□□□ -1.24
TDP1-209ENST00000554180 UBOX5O94941 541 aa7.32□□□□□ -1.24
TDP1-209ENST00000554180 UNC5CO95185 931 aa7.32□□□□□ -1.24
TDP1-209ENST00000554180 ETHE1O95571 254 aa7.32□□□□□ -1.24
TDP1-209ENST00000554180 TYRP1P17643 537 aa7.32□□□□□ -1.24
TDP1-209ENST00000554180 CDH3P22223 829 aa7.32□□□□□ -1.24
TDP1-209ENST00000554180 CALB2P22676 271 aa7.32□□□□□ -1.24
TDP1-209ENST00000554180 JAK1P23458 1154 aa7.32□□□□□ -1.24
TDP1-209ENST00000554180 ALDH4A1P30038 563 aa7.32□□□□□ -1.24
TDP1-209ENST00000554180 NBL1P41271 181 aa7.32□□□□□ -1.24
TDP1-209ENST00000554180 GSTM5P46439 218 aa7.32□□□□□ -1.24
TDP1-209ENST00000554180 MNAT1P51948 309 aa7.32□□□□□ -1.24
TDP1-209ENST00000554180 DIO3P55073 304 aa7.32□□□□□ -1.24
TDP1-209ENST00000554180 RPS13P62277 151 aaKnown RBP7.32□□□□□ -1.24
TDP1-209ENST00000554180 TBL3Q12788 808 aaKnown RBP7.32□□□□□ -1.24
TDP1-209ENST00000554180 TCF15Q12870 199 aa7.32□□□□□ -1.24
TDP1-209ENST00000554180 BNIP1Q12981 228 aa7.32□□□□□ -1.24
TDP1-209ENST00000554180 KLF10Q13118 480 aa7.32□□□□□ -1.24
TDP1-209ENST00000554180 RPS6KA2Q15349 733 aa7.32□□□□□ -1.24
TDP1-209ENST00000554180 RFTN2Q52LD8 501 aaPredicted RBP7.32□□□□□ -1.24
TDP1-209ENST00000554180 ZC3H12BQ5HYM0 836 aaKnown RBP7.32□□□□□ -1.24
TDP1-209ENST00000554180 DEPDC1Q5TB30 811 aa7.32□□□□□ -1.24
TDP1-209ENST00000554180 IL23RQ5VWK5 629 aa7.32□□□□□ -1.24
TDP1-209ENST00000554180 KHDRBS2Q5VWX1 349 aaKnown RBP7.32□□□□□ -1.24
TDP1-209ENST00000554180 FCRL6Q6DN72 434 aa7.32□□□□□ -1.24
TDP1-209ENST00000554180 TCEAL6Q6IPX3 200 aa7.32□□□□□ -1.24
TDP1-209ENST00000554180 ADNP2Q6IQ32 1131 aa7.32□□□□□ -1.24
TDP1-209ENST00000554180 IRGCQ6NXR0 463 aa7.32□□□□□ -1.24
TDP1-209ENST00000554180 PAGE2Q7Z2X7 111 aa7.32□□□□□ -1.24
TDP1-209ENST00000554180 PRSS42Q7Z5A4 293 aa7.32□□□□□ -1.24
TDP1-209ENST00000554180 TRIM73Q86UV7 250 aa7.32□□□□□ -1.24
TDP1-209ENST00000554180 KMT5CQ86Y97 462 aa7.32□□□□□ -1.24
TDP1-209ENST00000554180 METTL4Q8N3J2 472 aa7.32□□□□□ -1.24
TDP1-209ENST00000554180 ZNF655Q8N720 491 aaPredicted RBP7.32□□□□□ -1.24
TDP1-209ENST00000554180 GLB1L3Q8NCI6 653 aaPredicted RBP7.32□□□□□ -1.24
TDP1-209ENST00000554180 SRFBP1Q8NEF9 429 aaKnown RBP7.32□□□□□ -1.24
TDP1-209ENST00000554180 PRSS33Q8NF86 280 aa7.32□□□□□ -1.24
TDP1-209ENST00000554180 RP9Q8TA86 221 aaKnown RBP7.32□□□□□ -1.24
TDP1-209ENST00000554180 CREB3L4Q8TEY5 395 aa7.32□□□□□ -1.24
TDP1-209ENST00000554180 TSPEARQ8WU66 669 aa7.32□□□□□ -1.24
TDP1-209ENST00000554180 CHTF18Q8WVB6 975 aa7.32□□□□□ -1.24
TDP1-209ENST00000554180 STARD8Q92502 1023 aa7.32□□□□□ -1.24
TDP1-209ENST00000554180 TCEAL3Q969E4 200 aa7.32□□□□□ -1.24
TDP1-209ENST00000554180 CCDC74AQ96AQ1 378 aa7.32□□□□□ -1.24
TDP1-209ENST00000554180 CMTM5Q96DZ9 223 aa7.32□□□□□ -1.24
TDP1-209ENST00000554180 TCTN2Q96GX1 697 aa7.32□□□□□ -1.24
TDP1-209ENST00000554180 AHCYL2Q96HN2 611 aaKnown RBP7.32□□□□□ -1.24
TDP1-209ENST00000554180 QRFPRQ96P65 431 aa7.32□□□□□ -1.24
TDP1-209ENST00000554180 TRAPPC9Q96Q05 1148 aa7.32□□□□□ -1.24
TDP1-209ENST00000554180 OR2A5Q96R48 311 aa7.32□□□□□ -1.24
TDP1-209ENST00000554180 ZFYVE21Q9BQ24 234 aa7.32□□□□□ -1.24
TDP1-209ENST00000554180 SEMA5BQ9P283 1151 aa7.32□□□□□ -1.24
TDP1-209ENST00000554180 ARMCX1Q9P291 453 aa7.32□□□□□ -1.24
TDP1-209ENST00000554180 GIMAP2Q9UG22 337 aa7.32□□□□□ -1.24
TDP1-209ENST00000554180 TAGLN3Q9UI15 199 aa7.32□□□□□ -1.24
TDP1-209ENST00000554180 ADAM29Q9UKF5 820 aa7.32□□□□□ -1.24
TDP1-209ENST00000554180 PILRAQ9UKJ1 303 aa7.32□□□□□ -1.24
TDP1-209ENST00000554180 MAPRE3Q9UPY8 281 aa7.32□□□□□ -1.24
TDP1-209ENST00000554180 WBP11Q9Y2W2 641 aaKnown RBP7.32□□□□□ -1.24
TDP1-209ENST00000554180 POLR3HQ9Y535 204 aaPredicted RBP7.32□□□□□ -1.24
TDP1-209ENST00000554180 URADA6NGE7 173 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 BBIP1A8MTZ0 92 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 PSMD12O00232 456 aaPredicted RBP7.31□□□□□ -1.24
TDP1-209ENST00000554180 TXNDC9O14530 226 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 ANKRD28O15084 1053 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 CAPN5O15484 640 aaPredicted RBP7.31□□□□□ -1.24
TDP1-209ENST00000554180 ZSCAN9O15535 394 aaPredicted RBP7.31□□□□□ -1.24
TDP1-209ENST00000554180 NDUFS4O43181 175 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 MAP3K7O43318 606 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 B4GAT1O43505 415 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 LCMT2O60294 686 aaKnown RBP7.31□□□□□ -1.24
TDP1-209ENST00000554180 PRMT3O60678 531 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 CTSVO60911 334 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 ZBTB11O95625 1053 aaPredicted RBP7.31□□□□□ -1.24
TDP1-209ENST00000554180 TBX6O95947 436 aaPredicted RBP7.31□□□□□ -1.24
TDP1-209ENST00000554180 TGFB1P01137 390 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 GP1BAP07359 652 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 ANKRD34CP0C6C1 535 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 SLC35G6P0C7Q6 338 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 MSL3P1P0C860 447 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 THRAP10827 490 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 G6PDP11413 515 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 BCKDHAP12694 445 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 ST6GAL1P15907 406 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 GPX3P22352 226 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 PIK3R1P27986 724 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 CD1CP29017 333 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 TIA1P31483 386 aaKnown RBP eCLIP7.31□□□□□ -1.24
TDP1-209ENST00000554180 ASMTP46597 345 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 LSSP48449 732 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 RASSF2P50749 326 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 RAP1GDS1P52306 607 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 CLNS1AP54105 237 aaKnown RBP7.31□□□□□ -1.24
TDP1-209ENST00000554180 OR1D5P58170 312 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 C21orf58P58505 322 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms