RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 MRPL1Q9BYD6 325 aaKnown RBP10.43□□□□□ -0.74
PABPN1-203ENST00000553960 SLC6A16Q9GZN6 736 aa10.43□□□□□ -0.74
PABPN1-203ENST00000553960 ROGDIQ9GZN7 287 aa10.43□□□□□ -0.74
PABPN1-203ENST00000553960 SLC6A20Q9NP91 592 aa10.43□□□□□ -0.74
PABPN1-203ENST00000553960 MYNNQ9NPC7 610 aa10.43□□□□□ -0.74
PABPN1-203ENST00000553960 C1GALT1Q9NS00 363 aa10.43□□□□□ -0.74
PABPN1-203ENST00000553960 EHD3Q9NZN3 535 aa10.43□□□□□ -0.74
PABPN1-203ENST00000553960 PDP2Q9P2J9 529 aa10.43□□□□□ -0.74
PABPN1-203ENST00000553960 ABCD2Q9UBJ2 740 aa10.43□□□□□ -0.74
PABPN1-203ENST00000553960 ATP6V1HQ9UI12 483 aa10.43□□□□□ -0.74
PABPN1-203ENST00000553960 FIS1Q9Y3D6 152 aa10.43□□□□□ -0.74
PABPN1-203ENST00000553960 A0A0J9YY10 115 aa10.42□□□□□ -0.74
PABPN1-203ENST00000553960 LRIT2A6NDA9 550 aa10.42□□□□□ -0.74
PABPN1-203ENST00000553960 H7BY64 318 aa10.42□□□□□ -0.74
PABPN1-203ENST00000553960 FBP2O00757 339 aa10.42□□□□□ -0.74
PABPN1-203ENST00000553960 TXNDC9O14530 226 aa10.42□□□□□ -0.74
PABPN1-203ENST00000553960 ZSCAN9O15535 394 aaPredicted RBP10.42□□□□□ -0.74
PABPN1-203ENST00000553960 ZW10O43264 779 aa10.42□□□□□ -0.74
PABPN1-203ENST00000553960 SRPX2O60687 465 aaPredicted RBP10.42□□□□□ -0.74
PABPN1-203ENST00000553960 GPR37L1O60883 481 aa10.42□□□□□ -0.74
PABPN1-203ENST00000553960 DNAJA2O60884 412 aa10.42□□□□□ -0.74
PABPN1-203ENST00000553960 C9P02748 559 aa10.42□□□□□ -0.74
PABPN1-203ENST00000553960 IFI6P09912 130 aa10.42□□□□□ -0.74
PABPN1-203ENST00000553960 ZCCHC18P0CG32 403 aa10.42□□□□□ -0.74
PABPN1-203ENST00000553960 G6PDP11413 515 aa10.42□□□□□ -0.74
PABPN1-203ENST00000553960 UGT2B7P16662 529 aa10.42□□□□□ -0.74
PABPN1-203ENST00000553960 SDC1P18827 310 aa10.42□□□□□ -0.74
PABPN1-203ENST00000553960 MAOBP27338 520 aa10.42□□□□□ -0.74
PABPN1-203ENST00000553960 EPHA8P29322 1005 aaPredicted RBP10.42□□□□□ -0.74
PABPN1-203ENST00000553960 BSGP35613 385 aa10.42□□□□□ -0.74
PABPN1-203ENST00000553960 ARL1P40616 181 aaPredicted RBP10.42□□□□□ -0.74
PABPN1-203ENST00000553960 MAGEA8P43361 318 aa10.42□□□□□ -0.74
PABPN1-203ENST00000553960 CAPZBP47756 277 aa10.42□□□□□ -0.74
PABPN1-203ENST00000553960 TRPC1P48995 793 aa10.42□□□□□ -0.74
PABPN1-203ENST00000553960 NEK2P51955 445 aa10.42□□□□□ -0.74
PABPN1-203ENST00000553960 POLR2JP52435 117 aaKnown RBP10.42□□□□□ -0.74
PABPN1-203ENST00000553960 MTTPP55157 894 aa10.42□□□□□ -0.74
PABPN1-203ENST00000553960 RAE1P78406 368 aaKnown RBP10.42□□□□□ -0.74
PABPN1-203ENST00000553960 HMGCS1Q01581 520 aa10.42□□□□□ -0.74
PABPN1-203ENST00000553960 SF1Q15637 639 aaKnown RBP10.42□□□□□ -0.74
PABPN1-203ENST00000553960 KIF19Q2TAC6 998 aa10.42□□□□□ -0.74
PABPN1-203ENST00000553960 AGKQ53H12 422 aa10.42□□□□□ -0.74
PABPN1-203ENST00000553960 LRIF1Q5T3J3 769 aa10.42□□□□□ -0.74
PABPN1-203ENST00000553960 KIAA1614Q5VZ46 1190 aa10.42□□□□□ -0.74
PABPN1-203ENST00000553960 ZCCHC8Q6NZY4 707 aaKnown RBP10.42□□□□□ -0.74
PABPN1-203ENST00000553960 BNC2Q6ZN30 1099 aaPredicted RBP10.42□□□□□ -0.74
PABPN1-203ENST00000553960 ARMCX6Q7L4S7 300 aa10.42□□□□□ -0.74
PABPN1-203ENST00000553960 SNX32Q86XE0 403 aa10.42□□□□□ -0.74
PABPN1-203ENST00000553960 KMT5CQ86Y97 462 aa10.42□□□□□ -0.74
PABPN1-203ENST00000553960 DSELQ8IZU8 1212 aa10.42□□□□□ -0.74
PABPN1-203ENST00000553960 GOLM1Q8NBJ4 401 aa10.42□□□□□ -0.74
PABPN1-203ENST00000553960 OR4E2Q8NGC2 313 aa10.42□□□□□ -0.74
PABPN1-203ENST00000553960 OR4C6Q8NH72 309 aa10.42□□□□□ -0.74
PABPN1-203ENST00000553960 SAP25Q8TEE9 199 aa10.42□□□□□ -0.74
PABPN1-203ENST00000553960 POP5Q969H6 163 aaKnown RBP10.42□□□□□ -0.74
PABPN1-203ENST00000553960 UTP4Q969X6 686 aaKnown RBP10.42□□□□□ -0.74
PABPN1-203ENST00000553960 SPDL1Q96EA4 605 aa10.42□□□□□ -0.74
PABPN1-203ENST00000553960 PRAP1Q96NZ9 151 aa10.42□□□□□ -0.74
PABPN1-203ENST00000553960 PHF12Q96QT6 1004 aa10.42□□□□□ -0.74
PABPN1-203ENST00000553960 OR2A5Q96R48 311 aa10.42□□□□□ -0.74
PABPN1-203ENST00000553960 TBCDQ9BTW9 1192 aa10.42□□□□□ -0.74
PABPN1-203ENST00000553960 SPNS1Q9H2V7 528 aa10.42□□□□□ -0.74
PABPN1-203ENST00000553960 SEMA6CQ9H3T2 930 aa10.42□□□□□ -0.74
PABPN1-203ENST00000553960 CUEDC1Q9NWM3 386 aaPredicted RBP10.42□□□□□ -0.74
PABPN1-203ENST00000553960 GID8Q9NWU2 228 aa10.42□□□□□ -0.74
PABPN1-203ENST00000553960 SPHK1Q9NYA1 384 aa10.42□□□□□ -0.74
PABPN1-203ENST00000553960 ACTR10Q9NZ32 417 aa10.42□□□□□ -0.74
PABPN1-203ENST00000553960 MAP10Q9P2G4 905 aa10.42□□□□□ -0.74
PABPN1-203ENST00000553960 LEF1Q9UJU2 399 aaPredicted RBP10.42□□□□□ -0.74
PABPN1-203ENST00000553960 SLC6A14Q9UN76 642 aa10.42□□□□□ -0.74
PABPN1-203ENST00000553960 DLGAP4Q9Y2H0 992 aa10.42□□□□□ -0.74
PABPN1-203ENST00000553960 TMEM131Q92545 1883 aa10.42□□□□□ -0.74
PABPN1-203ENST00000553960 COL5A1P20908 1838 aaPredicted RBP10.42□□□□□ -0.74
PABPN1-203ENST00000553960 MN1Q10571 1320 aaPredicted RBP10.41□□□□□ -0.74
PABPN1-203ENST00000553960 TRBV5-3A0A0A0MS03 114 aa10.41□□□□□ -0.74
PABPN1-203ENST00000553960 FXYD1O00168 92 aa10.41□□□□□ -0.74
PABPN1-203ENST00000553960 PPM1DO15297 605 aa10.41□□□□□ -0.74
PABPN1-203ENST00000553960 SCN2BO60939 215 aa10.41□□□□□ -0.74
PABPN1-203ENST00000553960 ERN1O75460 977 aaKnown RBP10.41□□□□□ -0.74
PABPN1-203ENST00000553960 RASSF9O75901 435 aa10.41□□□□□ -0.74
PABPN1-203ENST00000553960 ETHE1O95571 254 aa10.41□□□□□ -0.74
PABPN1-203ENST00000553960 ABCB1P08183 1280 aaPredicted RBP10.41□□□□□ -0.74
PABPN1-203ENST00000553960 CELA2BP08218 269 aaPredicted RBP10.41□□□□□ -0.74
PABPN1-203ENST00000553960 DRD2P14416 443 aa10.41□□□□□ -0.74
PABPN1-203ENST00000553960 HOXB9P17482 250 aaPredicted RBP10.41□□□□□ -0.74
PABPN1-203ENST00000553960 ITGAXP20702 1163 aa10.41□□□□□ -0.74
PABPN1-203ENST00000553960 CAPN3P20807 821 aa10.41□□□□□ -0.74
PABPN1-203ENST00000553960 IL12AP29459 219 aa10.41□□□□□ -0.74
PABPN1-203ENST00000553960 FRKP42685 505 aaPredicted RBP10.41□□□□□ -0.74
PABPN1-203ENST00000553960 KCNK10P57789 538 aa10.41□□□□□ -0.74
PABPN1-203ENST00000553960 RPS13P62277 151 aaKnown RBP10.41□□□□□ -0.74
PABPN1-203ENST00000553960 RPL38P63173 70 aaKnown RBP10.41□□□□□ -0.74
PABPN1-203ENST00000553960 TGM3Q08188 693 aa10.41□□□□□ -0.74
PABPN1-203ENST00000553960 ZNF763Q0D2J5 394 aa10.41□□□□□ -0.74
PABPN1-203ENST00000553960 SF3A3Q12874 501 aaKnown RBP eCLIP10.41□□□□□ -0.742e-7■■□□□ 13.9
PABPN1-203ENST00000553960 HYAL2Q12891 473 aa10.41□□□□□ -0.74
PABPN1-203ENST00000553960 WASHC2DQ5SRD0 308 aa10.41□□□□□ -0.74
PABPN1-203ENST00000553960 MRM1Q6IN84 353 aaKnown RBP10.41□□□□□ -0.74
PABPN1-203ENST00000553960 FAM71E1Q6IPT2 247 aa10.41□□□□□ -0.74
PABPN1-203ENST00000553960 FBXO42Q6P3S6 717 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms