RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 HEMGNQ9BXL5 484 aa8.48□□□□□ -1.05
PRKCH-208ENST00000553846 CHMP5Q9NZZ3 219 aa8.48□□□□□ -1.05
PRKCH-208ENST00000553846 HCN3Q9P1Z3 774 aa8.48□□□□□ -1.05
PRKCH-208ENST00000553846 PCYOX1Q9UHG3 505 aa8.48□□□□□ -1.05
PRKCH-208ENST00000553846 TTC7AQ9ULT0 858 aaPredicted RBP8.48□□□□□ -1.05
PRKCH-208ENST00000553846 KLF13Q9Y2Y9 288 aaPredicted RBP8.48□□□□□ -1.05
PRKCH-208ENST00000553846 ALG6Q9Y672 507 aa8.48□□□□□ -1.05
PRKCH-208ENST00000553846 KCNE1BA0A087WTH5 132 aa8.47□□□□□ -1.05
PRKCH-208ENST00000553846 IGKV3D-11A0A0A0MRZ8 115 aa8.47□□□□□ -1.05
PRKCH-208ENST00000553846 A0A0G2JMM0 328 aa8.47□□□□□ -1.05
PRKCH-208ENST00000553846 A0A1B0GVC2 190 aa8.47□□□□□ -1.05
PRKCH-208ENST00000553846 A0A1W2PPB8 328 aa8.47□□□□□ -1.05
PRKCH-208ENST00000553846 A0A1W2PRS3 328 aa8.47□□□□□ -1.05
PRKCH-208ENST00000553846 KIR3DP1A8MWS1 328 aa8.47□□□□□ -1.05
PRKCH-208ENST00000553846 TXNDC9O14530 226 aa8.47□□□□□ -1.05
PRKCH-208ENST00000553846 NDC80O14777 642 aa8.47□□□□□ -1.05
PRKCH-208ENST00000553846 SPOPO43791 374 aa8.47□□□□□ -1.05
PRKCH-208ENST00000553846 PEX1O43933 1283 aa8.47□□□□□ -1.05
PRKCH-208ENST00000553846 PRMT3O60678 531 aa8.47□□□□□ -1.05
PRKCH-208ENST00000553846 GLSO94925 669 aaPredicted RBP8.47□□□□□ -1.05
PRKCH-208ENST00000553846 IGHG3P01860 377 aa8.47□□□□□ -1.05
PRKCH-208ENST00000553846 STATHP02808 62 aa8.47□□□□□ -1.05
PRKCH-208ENST00000553846 RBP3P10745 1247 aa8.47□□□□□ -1.05
PRKCH-208ENST00000553846 IL1RNP18510 177 aa8.47□□□□□ -1.05
PRKCH-208ENST00000553846 CD53P19397 219 aa8.47□□□□□ -1.05
PRKCH-208ENST00000553846 ACVR2AP27037 513 aa8.47□□□□□ -1.05
PRKCH-208ENST00000553846 ATP5DP30049 168 aa8.47□□□□□ -1.05
PRKCH-208ENST00000553846 ADSLP30566 484 aaPredicted RBP8.47□□□□□ -1.05
PRKCH-208ENST00000553846 PTPN7P35236 360 aa8.47□□□□□ -1.05
PRKCH-208ENST00000553846 CCNFP41002 786 aa8.47□□□□□ -1.05
PRKCH-208ENST00000553846 DGKQP52824 942 aa8.47□□□□□ -1.05
PRKCH-208ENST00000553846 PRPSAP1Q14558 356 aa8.47□□□□□ -1.05
PRKCH-208ENST00000553846 ARHGAP19Q14CB8 494 aa8.47□□□□□ -1.05
PRKCH-208ENST00000553846 SLC25A35Q3KQZ1 300 aa8.47□□□□□ -1.05
PRKCH-208ENST00000553846 FBXL19-AS1Q494R0 122 aa8.47□□□□□ -1.05
PRKCH-208ENST00000553846 GXYLT1Q4G148 440 aa8.47□□□□□ -1.05
PRKCH-208ENST00000553846 FLYWCH1Q4VC44 716 aa8.47□□□□□ -1.05
PRKCH-208ENST00000553846 CTSL3PQ5NE16 218 aa8.47□□□□□ -1.05
PRKCH-208ENST00000553846 SEM1Q6ZVN7 128 aa8.47□□□□□ -1.05
PRKCH-208ENST00000553846 LDB1Q86U70 411 aaPredicted RBP8.47□□□□□ -1.05
PRKCH-208ENST00000553846 PLD3Q8IV08 490 aa8.47□□□□□ -1.05
PRKCH-208ENST00000553846 CCDC50Q8IVM0 306 aa8.47□□□□□ -1.05
PRKCH-208ENST00000553846 CDKL3Q8IVW4 592 aaPredicted RBP8.47□□□□□ -1.05
PRKCH-208ENST00000553846 RCOR2Q8IZ40 523 aa8.47□□□□□ -1.05
PRKCH-208ENST00000553846 AFAP1L2Q8N4X5 818 aa8.47□□□□□ -1.05
PRKCH-208ENST00000553846 RELL2Q8NC24 303 aaPredicted RBP8.47□□□□□ -1.05
PRKCH-208ENST00000553846 APCDD1LQ8NCL9 501 aa8.47□□□□□ -1.05
PRKCH-208ENST00000553846 NUDT8Q8WV74 236 aa8.47□□□□□ -1.05
PRKCH-208ENST00000553846 SMPDL3AQ92484 453 aa8.47□□□□□ -1.05
PRKCH-208ENST00000553846 TM4SF19Q96DZ7 209 aa8.47□□□□□ -1.05
PRKCH-208ENST00000553846 LPAR4Q99677 370 aa8.47□□□□□ -1.05
PRKCH-208ENST00000553846 FAM118BQ9BPY3 351 aa8.47□□□□□ -1.05
PRKCH-208ENST00000553846 LRRC40Q9H9A6 602 aa8.47□□□□□ -1.05
PRKCH-208ENST00000553846 MRPS30Q9NP92 439 aaKnown RBP8.47□□□□□ -1.05
PRKCH-208ENST00000553846 TAC3Q9UHF0 121 aa8.47□□□□□ -1.05
PRKCH-208ENST00000553846 ZNF223Q9UK11 482 aaPredicted RBP8.47□□□□□ -1.05
PRKCH-208ENST00000553846 EFR3BQ9Y2G0 817 aa8.47□□□□□ -1.05
PRKCH-208ENST00000553846 LIPGQ9Y5X9 500 aa8.47□□□□□ -1.05
PRKCH-208ENST00000553846 OR14I1A6ND48 311 aa8.46□□□□□ -1.06
PRKCH-208ENST00000553846 E7ENX8 843 aa8.46□□□□□ -1.06
PRKCH-208ENST00000553846 SGK494L7N484 410 aa8.46□□□□□ -1.06
PRKCH-208ENST00000553846 SYT5O00445 386 aa8.46□□□□□ -1.06
PRKCH-208ENST00000553846 PRMT5O14744 637 aaPredicted RBP8.46□□□□□ -1.06
PRKCH-208ENST00000553846 CDC40O60508 579 aaKnown RBP eCLIP8.46□□□□□ -1.06
PRKCH-208ENST00000553846 RDH16O75452 317 aa8.46□□□□□ -1.06
PRKCH-208ENST00000553846 PSIP1O75475 530 aaKnown RBP8.46□□□□□ -1.06
PRKCH-208ENST00000553846 PKMP14618 531 aaKnown RBP8.46□□□□□ -1.06
PRKCH-208ENST00000553846 RPS3P23396 243 aaKnown RBP eCLIP8.46□□□□□ -1.06
PRKCH-208ENST00000553846 KIR2DL3P43628 341 aa8.46□□□□□ -1.06
PRKCH-208ENST00000553846 AVPR1BP47901 424 aa8.46□□□□□ -1.06
PRKCH-208ENST00000553846 ZFP36L2P47974 494 aaKnown RBP8.46□□□□□ -1.06
PRKCH-208ENST00000553846 TAS2R50P59544 299 aa8.46□□□□□ -1.06
PRKCH-208ENST00000553846 EIF3EP60228 445 aaKnown RBP8.46□□□□□ -1.06
PRKCH-208ENST00000553846 GPR85P60893 370 aa8.46□□□□□ -1.06
PRKCH-208ENST00000553846 TAP2Q03519 686 aa8.46□□□□□ -1.06
PRKCH-208ENST00000553846 TMED2Q15363 201 aa8.46□□□□□ -1.06
PRKCH-208ENST00000553846 NSDHLQ15738 373 aa8.46□□□□□ -1.06
PRKCH-208ENST00000553846 PARP6Q2NL67 630 aa8.46□□□□□ -1.06
PRKCH-208ENST00000553846 TSTD2Q5T7W7 516 aa8.46□□□□□ -1.06
PRKCH-208ENST00000553846 POMZP3Q6PJE2 187 aa8.46□□□□□ -1.06
PRKCH-208ENST00000553846 B3GNT6Q6ZMB0 384 aa8.46□□□□□ -1.06
PRKCH-208ENST00000553846 KIAA0408Q6ZU52 694 aa8.46□□□□□ -1.06
PRKCH-208ENST00000553846 OR5M3Q8NGP4 307 aa8.46□□□□□ -1.06
PRKCH-208ENST00000553846 OR9A1PQ8NGU1 263 aa8.46□□□□□ -1.06
PRKCH-208ENST00000553846 OR4L1Q8NH43 312 aa8.46□□□□□ -1.06
PRKCH-208ENST00000553846 FAM222BQ8WU58 562 aa8.46□□□□□ -1.06
PRKCH-208ENST00000553846 ZNF480Q8WV37 535 aa8.46□□□□□ -1.06
PRKCH-208ENST00000553846 SLCO2A1Q92959 643 aa8.46□□□□□ -1.06
PRKCH-208ENST00000553846 RERGQ96A58 199 aaPredicted RBP8.46□□□□□ -1.06
PRKCH-208ENST00000553846 BIRC8Q96P09 236 aa8.46□□□□□ -1.06
PRKCH-208ENST00000553846 OR1F2PQ96R84 312 aa8.46□□□□□ -1.06
PRKCH-208ENST00000553846 MACROD1Q9BQ69 325 aa8.46□□□□□ -1.06
PRKCH-208ENST00000553846 RBCK1Q9BYM8 510 aa8.46□□□□□ -1.06
PRKCH-208ENST00000553846 SLC6A16Q9GZN6 736 aa8.46□□□□□ -1.06
PRKCH-208ENST00000553846 SPTLC3Q9NUV7 552 aa8.46□□□□□ -1.06
PRKCH-208ENST00000553846 EML6Q6ZMW3 1958 aa8.46□□□□□ -1.06
PRKCH-208ENST00000553846 SAGE2PA6NJ88 616 aa8.45□□□□□ -1.06
PRKCH-208ENST00000553846 USP27XA6NNY8 438 aa8.45□□□□□ -1.06
PRKCH-208ENST00000553846 FAM171A2A8MVW0 826 aa8.45□□□□□ -1.06
PRKCH-208ENST00000553846 NPIPA2E9PIF3 369 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms