RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 NENFQ9UMX5 172 aa12.91□□□□□ -0.34
PRPF39-204ENST00000553605 TLN2Q9Y4G6 2542 aa12.91□□□□□ -0.34
PRPF39-204ENST00000553605 ZNF407Q9C0G0 2248 aa12.9□□□□□ -0.34
PRPF39-204ENST00000553605 CCDC162PA2VCL2 907 aa12.9□□□□□ -0.34
PRPF39-204ENST00000553605 FAM47E-STBD1D6RA91 191 aa12.9□□□□□ -0.34
PRPF39-204ENST00000553605 H7C0C1 242 aa12.9□□□□□ -0.34
PRPF39-204ENST00000553605 CRLF1O75462 422 aa12.9□□□□□ -0.34
PRPF39-204ENST00000553605 EPXP11678 715 aa12.9□□□□□ -0.34
PRPF39-204ENST00000553605 EZRP15311 586 aaKnown RBP12.9□□□□□ -0.34
PRPF39-204ENST00000553605 CCNFP41002 786 aa12.9□□□□□ -0.34
PRPF39-204ENST00000553605 BCL6P41182 706 aa12.9□□□□□ -0.34
PRPF39-204ENST00000553605 ATP5OP48047 213 aa12.9□□□□□ -0.34
PRPF39-204ENST00000553605 PPIAP62937 165 aaKnown RBP12.9□□□□□ -0.34
PRPF39-204ENST00000553605 MPP1Q00013 466 aa12.9□□□□□ -0.34
PRPF39-204ENST00000553605 RHAGQ02094 409 aa12.9□□□□□ -0.34
PRPF39-204ENST00000553605 RELAQ04206 551 aa12.9□□□□□ -0.34
PRPF39-204ENST00000553605 POU6F1Q14863 301 aa12.9□□□□□ -0.34
PRPF39-204ENST00000553605 ZNF425Q6IV72 752 aa12.9□□□□□ -0.34
PRPF39-204ENST00000553605 SUSD1Q6UWL2 747 aa12.9□□□□□ -0.34
PRPF39-204ENST00000553605 MDGA2Q7Z553 956 aa12.9□□□□□ -0.34
PRPF39-204ENST00000553605 KRT222Q8N1A0 295 aa12.9□□□□□ -0.34
PRPF39-204ENST00000553605 CYP4Z2PQ8N1L4 340 aa12.9□□□□□ -0.34
PRPF39-204ENST00000553605 SLC35G2Q8TBE7 412 aa12.9□□□□□ -0.34
PRPF39-204ENST00000553605 MAGEC3Q8TD91 643 aa12.9□□□□□ -0.34
PRPF39-204ENST00000553605 RNASE6Q93091 150 aaKnown RBP12.9□□□□□ -0.34
PRPF39-204ENST00000553605 FERMT1Q9BQL6 677 aa12.9□□□□□ -0.34
PRPF39-204ENST00000553605 SPATA7Q9P0W8 599 aa12.9□□□□□ -0.34
PRPF39-204ENST00000553605 FEZF1A0PJY2 475 aa12.89□□□□□ -0.35
PRPF39-204ENST00000553605 TUBAL3A6NHL2 446 aa12.89□□□□□ -0.35
PRPF39-204ENST00000553605 MAGEB17A8MXT2 336 aa12.89□□□□□ -0.35
PRPF39-204ENST00000553605 SGK494L7N484 410 aa12.89□□□□□ -0.35
PRPF39-204ENST00000553605 WDR1O75083 606 aa12.89□□□□□ -0.35
PRPF39-204ENST00000553605 CDC123O75794 336 aaPredicted RBP12.89□□□□□ -0.35
PRPF39-204ENST00000553605 STATHP02808 62 aa12.89□□□□□ -0.35
PRPF39-204ENST00000553605 PSMA3P25788 255 aa12.89□□□□□ -0.35
PRPF39-204ENST00000553605 RPA3P35244 121 aaPredicted RBP12.89□□□□□ -0.35
PRPF39-204ENST00000553605 PLGLB1Q02325 96 aa12.89□□□□□ -0.35
PRPF39-204ENST00000553605 PRDX1Q06830 199 aaKnown RBP12.89□□□□□ -0.35
PRPF39-204ENST00000553605 TMED2Q15363 201 aa12.89□□□□□ -0.35
PRPF39-204ENST00000553605 C1orf185Q5T7R7 199 aa12.89□□□□□ -0.35
PRPF39-204ENST00000553605 RIPPLY2Q5TAB7 128 aa12.89□□□□□ -0.35
PRPF39-204ENST00000553605 SASS6Q6UVJ0 657 aa12.89□□□□□ -0.35
PRPF39-204ENST00000553605 CAPN12Q6ZSI9 719 aa12.89□□□□□ -0.35
PRPF39-204ENST00000553605 CCDC50Q8IVM0 306 aa12.89□□□□□ -0.35
PRPF39-204ENST00000553605 TSLPQ969D9 159 aa12.89□□□□□ -0.35
PRPF39-204ENST00000553605 PPP1R2P1Q96PQ5 205 aa12.89□□□□□ -0.35
PRPF39-204ENST00000553605 SH3GL2Q99962 352 aa12.89□□□□□ -0.35
PRPF39-204ENST00000553605 ZDHHC11Q9H8X9 412 aa12.89□□□□□ -0.35
PRPF39-204ENST00000553605 RUVBL2Q9Y230 463 aaKnown RBP12.89□□□□□ -0.35
PRPF39-204ENST00000553605 ZANQ9Y493 2812 aa12.89□□□□□ -0.35
PRPF39-204ENST00000553605 MROH6A6NGR9 719 aa12.88□□□□□ -0.35
PRPF39-204ENST00000553605 FAM166BA8MTA8 275 aa12.88□□□□□ -0.35
PRPF39-204ENST00000553605 ACOT7O00154 380 aa12.88□□□□□ -0.35
PRPF39-204ENST00000553605 SLC16A5O15375 505 aa12.88□□□□□ -0.35
PRPF39-204ENST00000553605 IL1RNP18510 177 aa12.88□□□□□ -0.35
PRPF39-204ENST00000553605 ASCL1P50553 236 aa12.88□□□□□ -0.35
PRPF39-204ENST00000553605 CBLBQ13191 982 aa12.88□□□□□ -0.35
PRPF39-204ENST00000553605 TSTA3Q13630 321 aaPredicted RBP12.88□□□□□ -0.35
PRPF39-204ENST00000553605 ICE2Q659A1 982 aa12.88□□□□□ -0.35
PRPF39-204ENST00000553605 RGS9BPQ6ZS82 235 aa12.88□□□□□ -0.35
PRPF39-204ENST00000553605 ADCK2Q7Z695 626 aa12.88□□□□□ -0.35
PRPF39-204ENST00000553605 SLC13A5Q86YT5 568 aaPredicted RBP12.88□□□□□ -0.35
PRPF39-204ENST00000553605 PLD3Q8IV08 490 aa12.88□□□□□ -0.35
PRPF39-204ENST00000553605 LRRC75A-AS1Q8N1F1 130 aa12.88□□□□□ -0.35
PRPF39-204ENST00000553605 ARMC10Q8N2F6 343 aa12.88□□□□□ -0.35
PRPF39-204ENST00000553605 TMEM156Q8N614 296 aa12.88□□□□□ -0.35
PRPF39-204ENST00000553605 SMPDL3AQ92484 453 aa12.88□□□□□ -0.35
PRPF39-204ENST00000553605 FOPNLQ96NB1 174 aa12.88□□□□□ -0.35
PRPF39-204ENST00000553605 NAP1L5Q96NT1 182 aaPredicted RBP12.88□□□□□ -0.35
PRPF39-204ENST00000553605 DEFB126Q9BYW3 111 aa12.88□□□□□ -0.35
PRPF39-204ENST00000553605 TIMMDC1Q9NPL8 285 aa12.88□□□□□ -0.35
PRPF39-204ENST00000553605 DEPPQ9NTK1 212 aa12.88□□□□□ -0.35
PRPF39-204ENST00000553605 ALKBH4Q9NXW9 302 aa12.88□□□□□ -0.35
PRPF39-204ENST00000553605 ACAD8Q9UKU7 415 aa12.88□□□□□ -0.35
PRPF39-204ENST00000553605 HYOU1Q9Y4L1 999 aa12.88□□□□□ -0.35
PRPF39-204ENST00000553605 MPDZO75970 2070 aa12.88□□□□□ -0.35
PRPF39-204ENST00000553605 hCG_1818297A0A087WSY0 165 aa12.87□□□□□ -0.35
PRPF39-204ENST00000553605 A0A1B0GVC2 190 aa12.87□□□□□ -0.35
PRPF39-204ENST00000553605 PINLYPA6NC86 204 aa12.87□□□□□ -0.35
PRPF39-204ENST00000553605 CLCA1A8K7I4 914 aa12.87□□□□□ -0.35
PRPF39-204ENST00000553605 HSPB2A8KAH6 182 aa12.87□□□□□ -0.35
PRPF39-204ENST00000553605 HAT1O14929 419 aa12.87□□□□□ -0.35
PRPF39-204ENST00000553605 STK10O94804 968 aaKnown RBP12.87□□□□□ -0.35
PRPF39-204ENST00000553605 CCNDBP1O95273 360 aa12.87□□□□□ -0.35
PRPF39-204ENST00000553605 IGHG3P01860 377 aa12.87□□□□□ -0.35
PRPF39-204ENST00000553605 TUBB4AP04350 444 aa12.87□□□□□ -0.35
PRPF39-204ENST00000553605 TMEM253P0C7T8 217 aa12.87□□□□□ -0.35
PRPF39-204ENST00000553605 IL10P22301 178 aa12.87□□□□□ -0.35
PRPF39-204ENST00000553605 SLC1A1P43005 524 aa12.87□□□□□ -0.35
PRPF39-204ENST00000553605 HSPB2Q16082 182 aa12.87□□□□□ -0.35
PRPF39-204ENST00000553605 STX1AQ16623 288 aa12.87□□□□□ -0.35
PRPF39-204ENST00000553605 TYSND1Q2T9J0 566 aa12.87□□□□□ -0.35
PRPF39-204ENST00000553605 FBXL19-AS1Q494R0 122 aa12.87□□□□□ -0.35
PRPF39-204ENST00000553605 CATSPEREQ5SY80 951 aa12.87□□□□□ -0.35
PRPF39-204ENST00000553605 HMBOX1Q6NT76 420 aa12.87□□□□□ -0.35
PRPF39-204ENST00000553605 PRSS57Q6UWY2 283 aa12.87□□□□□ -0.35
PRPF39-204ENST00000553605 RBM43Q6ZSC3 357 aaKnown RBP12.87□□□□□ -0.35
PRPF39-204ENST00000553605 SLC22A16Q86VW1 577 aa12.87□□□□□ -0.35
PRPF39-204ENST00000553605 CYP4X1Q8N118 509 aa12.87□□□□□ -0.35
PRPF39-204ENST00000553605 RELL2Q8NC24 303 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms